Paenibacillus polymyxa E681: PPE_01934
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Entry
PPE_01934 CDS
T01319
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppy
Paenibacillus polymyxa E681
Brite
KEGG Orthology (KO) [BR:
ppy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppy03016
]
PPE_01934
Enzymes [BR:
ppy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PPE_01934
Transfer RNA biogenesis [BR:
ppy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PPE_01934
Prokaryotic type
PPE_01934
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ADM69770
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All DBs
Position
2054582..2055517
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AA seq
311 aa
AA seq
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MNPIKKEQATWEGVLPVYKPAGFTSHDVVAKARRLLGMKRIGHTGTLDPQVTGVLPLCLG
RATRVVEYMQERPKEYRATLRLGIATDTEDLTGKITEESERPVEVTEVEAKAVLKRFVGT
ISQVPPMYSALKVDGKRLYELAREGKTVERKSREVSIYELEMTGFAETGAYVDISFRALC
SKGTYIRTLCVDIGRELGYPSTMVKLERTMSAGIPAERCLTFEEIERFVADGSLGERLIT
TDQAIDYMPEHIVAEAKVTAALQGQRLSLNMISPPVTDNHPFRLYKEDKTFLGIYGRDES
DAIAPIKVFLP
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgataaagaaagaacaggcaacttgggaaggcgttctacctgtctataaacct
gctggatttacctctcatgatgtggtggccaaggctcgccgtttattaggtatgaagcga
atcggacacactggaacgcttgatccgcaagtaaccggtgttttgcccttgtgtctggga
cgtgccacccgtgtggtggaatacatgcaagagcggcccaaagaatatcgggctacactg
cgattaggaattgccacggataccgaagacctgactgggaaaatcacggaagagagtgaa
cgtccagtagaggtgacggaagtggaagccaaagcggttttgaagcgttttgttggtacg
atctcccaagttcctccaatgtactccgcgctaaaagtggatggcaaacgtctatatgaa
ctggctcgagaaggcaaaaccgtggaacgcaaaagtcgtgaagtgagcatttacgagttg
gaaatgacgggattcgcggagacgggggcgtatgtggatatttcttttcgtgccttatgc
tccaaaggtacttatatccgtacactatgtgttgatattggccgtgaattaggatatcct
tcaacgatggttaagctggagcgaaccatgtctgcgggaattcctgcggaacgttgtctg
actttcgaagaaatagagcgtttcgtagcggatggtagtcttggagagcgacttattaca
actgatcaggcgattgactatatgcctgagcatatagtggctgaagccaaggtaactgcg
gctctgcaaggccaacgcctgtcgctgaatatgatttcaccacctgtgacggacaaccat
cccttccgcttgtataaagaggataaaacgtttttaggcatatatggtcgggatgaatca
gacgcgatcgctcccattaaagtttttttaccttga
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