Paenibacillus polymyxa E681: PPE_02561
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Entry
PPE_02561 CDS
T01319
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ppy
Paenibacillus polymyxa E681
Brite
KEGG Orthology (KO) [BR:
ppy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppy03016
]
PPE_02561
Enzymes [BR:
ppy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PPE_02561
Transfer RNA biogenesis [BR:
ppy03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PPE_02561
Prokaryotic type
PPE_02561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Aspzincin_M35
Motif
Other DBs
NCBI-ProteinID:
ADM70389
LinkDB
All DBs
Position
complement(2820500..2821429)
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AA seq
309 aa
AA seq
DB search
MEFYFLGTNAGVPTIQRNVTSIALRLLEERRSMWLFDCGEGTQQEVLRSPLKLSRLEKIF
ITHLHGDHLFGLPGLLSSRAYQGGTTPLTVYGPPGIQEYIELSLGISQSRINYQLHIVEH
TGGVLFDDGQFRVESALLDHRIDSYGYRVVEMDKPGKLNQELLERYGIKPGPVYGKLKRG
ESVEVEGGVILHPQDVLGSPKKGRIITILGDTRPCPNTVVLAQDATVVVHEATFLHELAD
TAYEYHHSTALQAAEAAKAAGAGQLIMTHFSSRYKDQEQLQPLLEEAQSIFPNSLLAEQH
VLLPVPDIG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaattttattttctcggtacaaatgcaggtgtgcctacgattcagcgaaatgtaacg
tccatcgctcttcgtttgctggaagaacgaagaagcatgtggctgttcgactgcggcgaa
ggcactcaacaagaggtattgcgttcgccgctcaaactaagcagacttgaaaaaatattt
atcacgcatttgcatggggatcatctttttggtctgccgggactgctgtcgagcagggcg
tatcaggggggaacgacaccactgacggtatatggaccgcctggaatccaggaatatatc
gagctatctttagggatcagccaatcgcgtatcaattaccaactacatattgtggagcat
acgggcggggttctgtttgatgacggacaattccgggtagagtcagctttgctggatcat
cggattgacagctatggctaccgagttgtagagatggataagcccggtaagcttaaccaa
gagctgttggagcgatatggtattaagcccggcccggtgtacggtaagttaaagcgtggg
gaaagcgtggaggtagaaggtggagttattttgcatcctcaggatgtactgggttcgccg
aaaaaagggcgtattatcacgattttaggggatacgagaccttgtccgaatacggtagtg
ctggctcaagatgcaactgtcgtcgttcatgaagccacttttctgcatgaactggcagat
acagcttacgagtatcatcatagtacagcgcttcaggcagcggaagctgcaaaagccgca
ggtgcgggtcagctaatcatgacacattttagttctaggtataaagatcaggagcagctt
cagccattgctggaggaagcgcaaagcatatttcctaattcattgcttgcggagcagcat
gtgttgttaccggtacccgatatcggttaa
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