Paenibacillus polymyxa E681: PPE_02937
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Entry
PPE_02937 CDS
T01319
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ppy
Paenibacillus polymyxa E681
Pathway
ppy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PPE_02937
09124 Replication and repair
03420 Nucleotide excision repair
PPE_02937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppy03021
]
PPE_02937
03400 DNA repair and recombination proteins [BR:
ppy03400
]
PPE_02937
Enzymes [BR:
ppy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PPE_02937
Transcription machinery [BR:
ppy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PPE_02937
DNA repair and recombination proteins [BR:
ppy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PPE_02937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
AAA_22
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ADM70762
LinkDB
All DBs
Position
complement(3197880..3199703)
Genome browser
AA seq
607 aa
AA seq
DB search
MNPDHPCIVQRDFTVLLEMGLPGSEWARSQLQIYAELVKSPSAFHTYHITPLSLWNAAAL
GWSAEDIQNSLNSMSRWDIPRDLLKDIEQLVSRYGTLTLSREGTEEERTYSTDTIGAYRA
EHEPDGGIKTGKANNYTMVDRLILAAETPALLCELLTKQELKQLGLLRVDEVSASVPPEN
RGLLKQELTRLGYPVVDTAGYLEGNQLRFTLGKGQTKLQLRDYQVKAADAFEGADGLGGS
GVLVLPCGAGKTVIGMAVMNRLQCEVLILTSNTTSVRQWVEELKRKTDIPADSIGEYSGQ
KKEVRPITVATYQILTHRRTKDGDFEHMKLLSERKWGLIIYDEVHLLPAPVFRATADIQA
TRRLGLTATLVREDGCERDVFSLIGPKRYDMPWKELEQQGWIAQVDCVELRLPMTAELME
RSMRAEGRQQYRIAAENPVKLEAVRSLMQQHSGLPTLIIGQYLDQLRILAQELGVPLITG
SMSQTERVRWFDAFRKGTIRTLLVSKVANFAVDLPDAAVAIEVSGSFGSRQEEAQRLGRI
LRPKSGENKAYFYALVTENSKETDFAARRQLFLIEQGYEYAVRRFSVTEAIGGRDARPED
RGKKKEA
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagatcatccttgtattgtacaacgtgattttaccgttctgctggaaatgggc
ttgcccggttcagaatgggctcgttcacagttgcagatttatgcggagctggttaaaagc
ccgtccgcttttcatacataccacatcactccactgtctttgtggaacgcagctgccctc
ggatggagtgctgaggacattcaaaatagtttgaactccatgtcccgttgggatattcca
cgtgatttgttgaaggatattgaacagctcgtttctcgttatgggacgttgacgctttca
cgggagggtacggaagaagagcgaacttatagcacagatactattggcgcttaccgtgct
gaacatgagccagacggaggtataaagacagggaaagccaacaactatacaatggttgat
cgcttgatcttggcagcagagacccccgctttactgtgtgagctactaaccaagcaagag
cttaaacagcttggtttacttcgcgttgatgaggtaagcgcatcggttccgcccgaaaat
cggggcttgctcaagcaggaattaactcgcttgggatatcccgttgtggatacggcaggc
tatcttgaagggaatcagcttagatttaccttgggaaagggacaaacgaagttgcagctt
cgtgattatcaagtaaaggccgctgatgcgtttgaaggagcggacggcttagggggtagt
ggtgtactggtacttccatgcggagccggaaaaacagtgataggtatggccgtaatgaat
cgacttcagtgcgaggtgcttattctaacatctaataccacttctgtacgtcaatgggta
gaagagttaaaacgaaagacggatattcctgcggattccatcggggaatatagtggtcag
aaaaaagaggtgcgtccgattacggtggcaacctaccaaattttgacacaccgtcgcacc
aaagatggggattttgagcatatgaaactactgagtgagcggaagtggggactcattata
tatgatgaggttcatttgctgcccgcgccagtatttcgggcgacggctgacattcaggct
actcgtcgtttggggttaacagccacgctggttcgtgaggatggttgtgaacgagatgta
ttctctttaattggacccaaacggtatgatatgccatggaaggaactggagcaacagggc
tggatcgctcaggtcgattgtgtggagctacggcttccaatgacagctgaacttatggag
cgcagtatgcgtgccgagggcagacagcagtaccgaattgcagccgaaaatccggtcaaa
ctggaggcagtgcgtagcctgatgcagcaacacagtggcttgcccacgcttattattggt
caatatttggatcaattgcgtatattggctcaggagctgggcgttcccctgattacgggt
tcaatgagccagaccgagcgggtgcgttggttcgatgcgttccgcaagggtacaattcgg
accctattggtatccaaggttgcaaactttgcggtggatctgccggatgcggcagtagcc
atagaggtatcgggtagctttggctctcgtcaggaagaagcgcagcgactgggccgcatt
ttgcgaccaaagtcgggcgagaataaagcttatttttatgcgctagtgacggagaatagc
aaggagacggattttgcggctcgtcgtcagctgtttctgattgagcaaggctatgaatat
gcggttcgcagatttagtgtgacagaggctatcggaggccgggatgctaggcctgaagat
cgtggaaagaaaaaggaggcctaa
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