Paenibacillus polymyxa E681: PPE_03129
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Entry
PPE_03129 CDS
T01319
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ppy
Paenibacillus polymyxa E681
Pathway
ppy00470
D-Amino acid metabolism
ppy00550
Peptidoglycan biosynthesis
ppy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PPE_03129 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PPE_03129 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppy01011
]
PPE_03129 (murD)
Enzymes [BR:
ppy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PPE_03129 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppy01011
]
Precursor biosynthesis
Amino acid ligase
PPE_03129 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Pyr_redox_3
2-Hacid_dh_C
XdhC_C
Pyr_redox
Phage-A118_gp45
Motif
Other DBs
NCBI-ProteinID:
ADM70949
LinkDB
All DBs
Position
complement(3432111..3433532)
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AA seq
473 aa
AA seq
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MNHPDAYRDQEVVIIGLAKSGVQVAKVLHQAGAKLTVNDKKDREQCPEASELEALGISVL
CGGHPEGLIHPGVKLVVKNPGIPYTAPPVQKAVELGIEVVTEVEVAYHLCKAPIIGITGS
NGKTTTTTWVGKLLEASGMNPIVAGNIGTPVCEAAVDAKSDEWMVVELSSFQLKGTKDFR
PTVACLLNVAETHLDYHGGMEDYVASKARLFANQTAADTAVVNWDDPVCRELVPYIKAKL
LPFSMTERLQEGVFADPPYIPDVTDDIERSIVYRDGNGVLHPIIGVAEIGLPGRFNVENA
LAACAIAIAAGAEPANLAEPLSTFRGVEHRLEYVLEHAGVAYYNNSKATNSKATMMALSS
FKQPIVLIAGGLDRGSDYTELVPSLQEGVKAVVLLGETRHKLAERAQQAGIEHVKVVDNG
EDAAATLVEAVNKAAEFAETGDVVLLSPACASWDMFRSYEERGRIFKEAAHKL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaaccatccagacgcatacagagatcaggaagtcgtcattatcggtctggctaaaagc
ggagtgcaagttgccaaggtgctgcaccaggccggagctaagctgacagtcaatgataaa
aaagatagggaacaatgtcccgaagcttctgaattagaggctttgggaatttccgtttta
tgcgggggtcacccagaggggctaattcatcctggggtgaagctggttgtcaaaaatcca
gggattccttatacggcccctcccgtacagaaagctgtcgagctcggcattgaggtcgtg
accgaggttgaggtcgcctaccatctatgtaaagctccgatcatcggaattactggctcc
aacggaaagacgaccacgaccacttgggtaggcaagctgttggaggcatccggcatgaat
ccaatcgtggctggtaatatcggtacgcccgtatgtgaggcggctgtggatgccaagtcg
gacgagtggatggttgtagagctgagcagctttcagttaaaaggaacaaaagatttcagg
cccactgtggcctgcctgctcaatgtagctgagacccatttggactaccacggaggcatg
gaggactacgttgcatccaaggcgcgtctatttgccaatcaaacggcggcggatactgcg
gtggtgaactgggatgaccccgtctgccgggagctcgtaccctatataaaagcgaagctg
cttccgttctctatgacagaacgtttgcaggaaggggtgttcgctgacccgccatacata
ccggatgtgacggacgacattgaacgtagcatcgtataccgcgatggaaatggtgtgctg
catcccattataggcgtagctgagattggacttccgggtcgttttaacgtagaaaatgct
cttgctgcttgcgcaatcgctattgctgcaggcgcagaaccagcgaatttggcagaacca
ttaagtacttttcgtggcgtcgaacatcggcttgaatatgttttagaacacgctggtgta
gcttattacaataactccaaagcaaccaattcgaaagcaacaatgatggccttatcttcc
tttaagcaacccattgtactcattgccggaggattggatcgcggttctgattatacagag
ctcgtaccttccttgcaggaaggtgtgaaagccgttgtgctcttgggtgagacacgacat
aagttggctgagcgggcccagcaagccggaatagagcatgtcaaggtcgtcgataatggg
gaggatgctgccgctacgctcgtggaggctgtgaacaaggctgctgaatttgctgagacg
ggagatgtagtattactctcacccgcctgtgcaagctgggatatgttccgatcctatgaa
gagcgtggacgtatttttaaagaggcagcgcataaattgtaa
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