Paenibacillus polymyxa E681: PPE_03197
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Entry
PPE_03197 CDS
T01319
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ppy
Paenibacillus polymyxa E681
Brite
KEGG Orthology (KO) [BR:
ppy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppy03400
]
PPE_03197
Enzymes [BR:
ppy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PPE_03197
DNA repair and recombination proteins [BR:
ppy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
PPE_03197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
nSTAND1
AAA_29
AAA_25
ABC_tran
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADM71015
LinkDB
All DBs
Position
complement(3510677..3514246)
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AA seq
1189 aa
AA seq
DB search
MSVRLLIGRSGSGKSTLIRNEMTSMLREEPLGKPMLLLVPEQSSFASEHALLTEAGNSIQ
GSVRAQVMGFHRLAYLVMQETGGSALVPVTEEGKKMLLYKIIRRRKDELSLFKDSGDQLG
FVDRLNTLFTELKQYGNDTRPVPEQLERMNAAGESTPILRGKLKDISLIYEDFERELTLK
YIDGEDTLRMLAEQIAESSLVRGADIWMDGYRRFTPHEYKVVEQLMLHASSLTVALTCNR
SYESGQLPHELDLFHPSAATYVKLKGMADELMIETQTQLLRPDPLPRFKERPALAYLEAN
FEHRTGLRNQEQLRMRQQKLREQWTEEQPEGIKLYAAANRRAELEGAVREMRRLARDEGA
RYREMALFVRHIEDYEPWVEPIFKQYEVPVFLDQRRSVLHHPLVELIRASLDIVQRRWRY
EDVFRAVKTDLLLPLDGRVSREEMDRLENYVLACGIQGSRWTDGRPWQAVPSLSLELEEQ
ERNRRRDETLDLMELCRDVIVTPLRAFEKRVGKARTALEKCEAVYLLLEDAEIGHKLDAF
IHQAEEAGKPEQAKEHRQVWDAVLELLDQIVEMMGDERLDTSLFAGVLETGLAEFRMGLV
PPALDQVLVGNTDRTRVSGIQHAFVLGMNEGVMPAVFHEDGVLNEQERTALNERGVELAP
DMTRRLLDERFLAYTALTSAGKSLWMSYAVTDEEGKSLLPSELVRHVRHLFPSLDERPLA
GYPLPGDAWTTQWEYASHPSEALPQLIAQLRHWRRGGDILSPWWEVYNWYASQQGREKDK
LRQLLTSLFYENHAEMQKETSRRLYGSKLRTSVSRMERFVACPFSHFASHGLRLKERQMY
RLKAPDIGQLFHAVLGEMAINLRNRNVSWGSLSTEECRQEAESTVERLAPRLQGEILMSS
KRYGYILRKLKDIVSRASLILGEHARRGSFEPIGLELDFGPGQQLPPLSFRLDNGVVMEI
VGRIDRVDVAEGEKGLLLRVIDYKSSQKDFKLHEVYYGLSLQMLTYLDVLLNAAEGWLGE
TAYPAGTLYFHVHNPMLQSPNGLSAEQARQELLKRFKMKGLLLADRDVVGQMDTALDKGY
SSILPVAVKADGSFYSSASVASPEQWDSLLASVRNNIRTIGTRMTEGDVAIEPYRIQQET
ACTFCSFKPVCQFDDSLEGSGYNQWGKPGKDQIWNLLGHTQEGKGGMDQ
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtccgcttgttgattggccgctctgggagtggtaagagtacgttaatccgcaat
gaaatgacgtctatgttacgtgaggagccgctaggtaagcctatgctgttgcttgtaccg
gagcaatcgtcatttgcttctgagcatgcgttacttacagaagccggaaacagtattcag
gggtcggtgcgcgcccaagtgatgggatttcatcgtcttgcctatttagttatgcaggaa
accgggggttcagcgctggtacctgtaacggaagaaggcaagaagatgcttttatataaa
attattcgtcgtcgcaaggatgaactgagtttgtttaaggattcgggagaccagctcggc
tttgtggatcggttgaatacattgtttacggagctaaagcagtatggaaatgatactcgg
cctgtacccgagcaactggagcgaatgaacgctgcaggagagtcaactccgattttgcgc
ggcaagctcaaagatatcagtctaatctacgaggattttgaacgagagctgacgcttaaa
tatatagacggtgaagatacgctgcgcatgctggcagaacagattgctgagtcttccctt
gtgcgcggggcagatatttggatggatggctaccgcaggtttacaccacatgaatacaag
gtggtggagcagcttatgctgcacgcctcttcgttgacggtggcgctgacttgcaaccgc
agctacgagagcggacagcttccgcatgagctggatttgtttcatccttcggcggctacg
tatgtaaagctcaaaggaatggcagacgagctgatgatagagacgcagacacaattactg
cgccctgatccgctgccgagatttaaggagcgtccagcgttagcgtatttggaggctaac
tttgaacatcgtacaggattacggaatcaggaacagctacggatgcggcagcaaaagcta
cgagagcagtggacagaagaacagccggaaggcataaaactgtatgctgcggcgaatcgc
cgcgcagagctggaaggggctgtacgcgaaatgcgtcgtctggcccgagatgagggcgcg
cgttatcgggagatggctctgtttgtgcgtcatattgaagattacgagccttgggtggaa
ccgatattcaaacaatatgaggttccagtatttctggatcagcggagaagtgtattgcat
catcccttagtggaattgattcgggcttcgctggatatcgtgcagcgtcgttggcgatat
gaggatgtattccgtgcggtcaaaacagatcttctcctgccgctggatggtcgggtgagc
cgtgaggagatggaccgtttggaaaactatgtactggcctgcggaatacaaggcagccgt
tggacagacggtcgcccgtggcaggctgtgcccagcttgtcactggagctggaggagcag
gaacggaaccgtaggcgggatgaaacgttggatttgatggaactgtgccgggatgtgatc
gtgacgcctttacgtgcgtttgagaaacgtgtgggcaaggcacgaactgcacttgagaag
tgtgaagcggtatatctgttactggaggatgcagaaatcggccacaagctggacgccttc
attcatcaggcagaggaagcaggaaaacctgagcaggcgaaggagcatcgtcaggtatgg
gatgcagtgcttgaactactggatcaaattgtcgaaatgatgggtgatgaaaggctggat
acctctttatttgcgggtgtgctggaaacgggattggccgagttccgtatgggacttgtt
ccgccggctctggatcaggttctagtcggaaacacggaccgtacacgtgtgtccggtatt
caacatgcttttgtgctaggtatgaacgaaggtgtgatgccggctgtgttccatgaggac
ggtgtgctgaatgagcaggagcgtacggcattaaacgaacggggcgtagagctggcgccc
gatatgacaagacgtctgttggacgaacgttttctcgcttatacggcccttacttcagcc
ggtaaaagcctgtggatgagctatgcagtgactgatgaagaaggcaagtcattgttgcca
tctgagttagtacgacatgtgcggcacctgtttcctagtctggacgaacgtccgttggct
ggataccctttgcctggggatgcttggacgacgcaatgggagtatgcttctcatccgtcc
gaggctttgccgcagctcattgcgcaattacgacattggcgacgtggcggtgacatttta
tctccttggtgggaggtatataactggtatgccagccaacaagggcgtgagaaggacaag
ctgcgtcagctgttgacctcacttttttatgagaaccatgccgaaatgcagaaggaaacg
agccgccgtctatacggcagcaagctgcgtaccagcgtatctcgtatggaacgttttgtg
gcatgtccattttcgcactttgcctctcacggtcttcgtttgaaggaacgtcaaatgtat
cgcctgaaggccccggatatcggacagttatttcatgcagtgcttggtgagatggcgatc
aatctgcgtaatcgcaatgtcagctggggcagtctcagcaccgaggaatgccgacaagag
gcggaaagtacagtagagcgtttggctcctcgtctgcaaggcgagattttaatgagctcc
aagcggtatggctacattttacgtaaattgaaagacatcgtgagccgtgcttcgttgatc
ttaggtgaacatgcgcgaagaggtagctttgagccgattgggctagagttggactttggg
ccgggtcagcagcttcctccattaagcttccggttagataacggcgttgtgatggaaatt
gtcggacggattgaccgtgtggatgtggcagagggagaaaagggtttacttttgcgtgtc
atcgattacaagtccagccaaaaggatttcaagctgcatgaagtgtactatggcttgtcc
ctgcaaatgctcacgtacctggatgtgctgctgaatgcggcggagggatggttgggcgag
actgcttatccggcgggtaccctgtattttcacgtccacaatccgatgttgcagtcgcct
aacggtcttagcgcagaacaggcccgtcaggagcttttgaaacgttttaagatgaaggga
ttattgcttgcggatcgggatgtagttgggcaaatggatacagcattggacaagggatat
tcctctattttacctgttgcggtgaaagcagacggcagtttttatagcagtgcttcggtt
gcttcgccggaacagtgggacagcctgctagcttcggtgcgtaataatattcggacgatt
ggtacacggatgacagagggcgatgtggccattgaaccttatcgtatccagcaagagacg
gcatgtactttctgctcttttaagcctgtttgtcaatttgacgacagtctggagggcagt
ggctacaatcaatggggtaaacccggtaaggatcagatctggaatctgctgggtcataca
caggaagggaaaggaggaatggaccaatga
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integrated database retrieval system
