Paenibacillus polymyxa E681: PPE_03469
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Entry
PPE_03469 CDS
T01319
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ppy
Paenibacillus polymyxa E681
Pathway
ppy00040
Pentose and glucuronate interconversions
ppy01100
Metabolic pathways
ppy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PPE_03469
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPE_03469
Enzymes [BR:
ppy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PPE_03469
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ADM71286
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Position
3782588..3783871
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AA seq
427 aa
AA seq
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MKKRFSLGIAAALLFTTLSPLGAPAHAASDIGKETLGSKNGWAAFSTGTTGGAAASSSNI
FTVTNRKQLVDALGKSSNSTPKIIYVKGTINANVDDNNKPLGLNDYKDSKYDFDAYLKAY
DPSTWGKKAPSGTLEKAREASQKNQASRVVIDIPSNTTIVGQGSNAIINGANLQLKKGTD
NVIIRNIEFQDAYDYFPQWDPTDGSTGNWNSEYDSITINGATHVWVDHNTFNDGSHPDSQ
NGTFYGQEYQHHDGLLDVINQGDLVTVSYNHFYDHDKSSIIGNSDSKTADEGALRVTLHH
NYYENTVQRTPRVRYGQVHLYNNYYTGDVNRSEYPSLYIWGAGKSSKIFAENNVIDVAGL
SAAKIVTVFGGTALSDTGTLLNGQAVNAGSSAGLSSSVGWKPSLNDKISPSASVKAEVTS
QAGSGKL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagattttcactcggaatcgcagcagctctgctgttcactaccctatcccct
cttggtgcacctgctcatgcagccagcgatattggtaaagaaacgcttggcagcaaaaac
ggatgggcagctttttctacaggcacaacgggcggagctgcagcttcttcttccaatatt
ttcaccgtaacgaatcgcaagcaattagttgatgccttaggcaaaagcagcaatagtacg
cctaaaatcatttatgtcaaaggcacgatcaacgccaacgtcgatgacaataacaagcca
ctgggattgaacgattacaaggactctaaatatgattttgacgcctacctcaaagcttat
gacccatccacttggggtaaaaaggctccgtccggcacattggaaaaggcacgtgaggct
tcacaaaaaaatcaggccagtcgtgttgtcattgatattccttccaatacaacgattgtc
ggtcagggtagcaatgccatcattaacggcgcgaaccttcaactaaaaaaagggacagac
aacgttattatccgtaatatcgaattccaggatgcctacgattattttcctcaatgggac
ccaacggacggcagtacaggcaattggaattcggaatatgacagcattacaattaacggc
gccacacatgtatgggtagaccacaataccttcaatgatgggtctcaccccgatagccaa
aatggcaccttttacggccaagaataccagcatcatgatggacttctcgatgtgattaac
caaggcgatctggtaacggtttcttacaatcatttttacgatcatgataaatcatcgatt
attggcaacagcgacagcaaaacagcagatgaaggagctttacgtgtaactctgcaccac
aattattatgaaaacacggtccaacgcacaccacgcgtacggtatggacaagtccatctg
tacaacaattactatacaggtgatgtaaatcgctctgagtatccttcactgtatatatgg
ggtgcaggtaaatcctccaaaatcttcgccgaaaacaatgtcatcgacgttgcgggatta
tccgctgccaaaattgtaactgtttttggaggaactgccttgtccgacaccggcacactt
ctgaatggacaagctgtaaacgcaggttccagcgcggggcttagctcctctgtaggctgg
aaaccatcgctaaacgataaaatttccccatccgccagtgtgaaggcagaagtcacttcc
caagctggttccggtaaactgtaa
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