Paenibacillus polymyxa E681: PPE_04248
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Entry
PPE_04248 CDS
T01319
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ppy
Paenibacillus polymyxa E681
Brite
KEGG Orthology (KO) [BR:
ppy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppy03016
]
PPE_04248
Enzymes [BR:
ppy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PPE_04248
Transfer RNA biogenesis [BR:
ppy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PPE_04248
Prokaryotic type
PPE_04248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ADM72012
LinkDB
All DBs
Position
complement(4640553..4641338)
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AA seq
261 aa
AA seq
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MRNLCMKVNYDGTHYDGFQTQPNGNTIQDCLEHAIYSLTGERLKITGSGRTDAGVHAYGQ
VFNFHTESPIPLQRWCLALNAWLPRDIIVTDAREVPLSFHARRMAKRKTYRYSINANRFP
DIFHRRTQVHHPTSLDVRAMEEGLAHLVGTFDYTSFASRRSQKTNHVRTIYEAYMTVDHS
FSRPDSDDQGIIHTYITGSGFLQHMVRIIMGTLLEVGEGKKSSDDIPSILEAKNRSKAGP
TAVGHALTLWNVEYDENIKKH
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcggaacttgtgcatgaaggtgaactatgacggaacccactatgatggctttcagacg
cagcctaacggtaacaccattcaggactgccttgaacatgctatttactcattgacgggc
gagcgtcttaaaatcacaggctcaggccgtacagatgcaggtgtacatgcatacgggcag
gtattcaattttcacactgaatcgccgattccgttacagcgctggtgtctggcacttaat
gcctggttgcctcgtgatatcatcgttacggatgcgagagaggtgccactgtcctttcat
gcacgccgcatggcgaagcggaagacatatcggtacagtattaatgcgaaccggtttccg
gacatctttcaccgtcgtacacaggtccatcatccaacgagtctggatgtaagagcgatg
gaggaagggttagctcatttagttggcacctttgactatacttcgttcgcatctcgacgt
tcccaaaagacgaatcatgttcggactatttacgaagcctatatgacagtagaccattcc
ttttcacgtccggactcggatgatcagggaattatccatacttatattacaggtagcgga
tttttgcagcacatggttcggattattatggggactttgctggaagtgggagaaggcaaa
aaatcgtcggatgatattccttccattttggaggcaaaaaatcgttcaaaggccggacct
acggccgttggacacgctttaacgctctggaatgtagagtacgacgaaaacatcaaaaaa
cattga
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