Paenibacillus polymyxa E681: PPE_04468
Help
Entry
PPE_04468 CDS
T01319
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppy
Paenibacillus polymyxa E681
Pathway
ppy00260
Glycine, serine and threonine metabolism
ppy00460
Cyanoamino acid metabolism
ppy00630
Glyoxylate and dicarboxylate metabolism
ppy00670
One carbon pool by folate
ppy00680
Methane metabolism
ppy01100
Metabolic pathways
ppy01110
Biosynthesis of secondary metabolites
ppy01120
Microbial metabolism in diverse environments
ppy01200
Carbon metabolism
ppy01230
Biosynthesis of amino acids
ppy01240
Biosynthesis of cofactors
ppy04981
Folate transport and metabolism
Module
ppy_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ppy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PPE_04468 (glyA)
09102 Energy metabolism
00680 Methane metabolism
PPE_04468 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PPE_04468 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PPE_04468 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PPE_04468 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PPE_04468 (glyA)
Enzymes [BR:
ppy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PPE_04468 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ADM72228
LinkDB
All DBs
Position
complement(4895257..4896507)
Genome browser
AA seq
416 aa
AA seq
DB search
MMEHLRKSDPAVMEAMGLELKRQRHNIELIASENIVSEAVMEAMGSVLTNKYAEGYPNKR
YYGGCEHVDIVEDIARDRAKELFGAEHANVQPHSGAQANMAVYLAALKPGDTVLGMNLAH
GGHLTHGSPVNASGLLYNFAAYGVREDNFRIDYDEVRKAAFKHRPRLIVAGASAYPRTID
FEAFASIANDVGALFMVDMAHIAGLVAAGIHPSPVPHAQFVTTTTHKTLRGPRGGLILTR
KAWAQAIDKAIFPGTQGGPLMHVIASKAVALGEALQPSFKTYAQNVVRNAQVLAETLLAE
GINIVSGGTDNHLMLLDTRNLNITGKEAEHVLDSVGITVNKNAIPFDPTSPFVTSGIRIG
TPAATSRGMDEEAMVKIGKIIAETLKNPKDDTVLSKASQAVGELTDKFPIYPGTQY
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgatggaacacctgcgtaaaagtgacccggcagtgatggaagcaatgggacttgaactg
aaacgacaacgccacaatatcgagctaatcgcatccgagaacattgtcagtgaagcagta
atggaagcaatgggctccgtgctgacgaataaatatgctgaaggttatccgaacaaacgc
tactatggtggctgtgaacatgtagatatcgttgaagacatcgcacgtgaccgcgcaaaa
gaactgttcggcgccgagcatgctaacgtgcagcctcactctggagcacaagccaacatg
gcggtgtatctggcagctctcaaacctggagatactgtactgggtatgaatctggcgcat
ggtggccatttaacacacggaagtccggttaacgcttccggcttgttgtataactttgct
gcctatggtgtgcgcgaagacaacttccgcatcgactacgatgaagtgcgcaaggcagcc
tttaagcaccgtcctcgtctgattgtagctggcgcgagtgcatatccgcgtactattgat
tttgaagcttttgcttccattgccaatgatgtaggtgctttgttcatggtggatatggcg
catatcgcaggtcttgtggcagcgggaattcacccaagtccagttccgcatgcccaattt
gtaacaacaacgacacacaaaacgctgcgtggtccgcgtgggggtctgattctgactcgc
aaagcatgggcgcaagcgatcgataaagctattttccctggtactcaaggggggccgctg
atgcatgtgatcgcgtccaaagcggttgctttgggtgaagcgctccagccatcgttcaaa
acctatgcgcaaaacgtagttcgcaacgcacaggtactggctgaaacactgctggctgag
gggattaacattgtatccggtggtacggataaccatctaatgttgttggatacgcgcaat
ttgaatatcacaggtaaagaagcggagcatgtattggattccgtgggcatcacagtgaat
aaaaatgcgattccttttgacccgaccagtccattcgtaacaagcgggattcgtattggt
acacctgctgcaacatctcgtggtatggatgaagaggctatggtcaaaatcggtaaaatc
attgccgaaacccttaaaaatccgaaagatgatactgtattgtccaaagcaagccaagcg
gttggcgagttgacagacaagttcccgatctatccaggaactcaatactaa
DBGET
integrated database retrieval system