Pongo pygmaeus (Bornean orangutan): 129006540
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Entry
129006540 CDS
T10128
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03040
Spliceosome
ppyg05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129006540
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129006540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyg03019
]
129006540
03041 Spliceosome [BR:
ppyg03041
]
129006540
Messenger RNA biogenesis [BR:
ppyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129006540
mRNA cycle factors
Common to processing body (P body) and stress granule
129006540
Spliceosome [BR:
ppyg03041
]
Common components
Common spliceosomal components
hnRNP proteins
129006540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HnRNPA1_LC
RRM_1
DUF4715
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
129006540
NCBI-ProteinID:
XP_054292242
LinkDB
All DBs
Position
8:complement(52107546..52108579)
Genome browser
AA seq
183 aa
AA seq
DB search
MTDRGSGKKRGFAFVTFDDHDSVDKMVIQKYHTVNDHDCEARKALLKQEMASASSSQRSR
SGSGNFGVGRGGGFGGNDNFGHGRNVSGRGGFGGSRGGGGYGGSGDGYRGFGNDGSNFGG
GGSYNEFGSYNNESSNFGPTKGGNFGGRSSGPCGGGGQCFAKPRNQGDYGGSSSSSSYGS
GRF
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccgaggcagtggcaagaaaaggggctttgcctttgtaacctttgacgaccat
gactccgtggataagatggtcattcagaaataccatactgtgaatgaccacgactgtgaa
gctaggaaagccctgttaaagcaagagatggctagtgcttcatccagccaaagaagtcga
agtggttctggaaactttggcgttggtcgtggaggtggtttcggtgggaatgacaacttt
ggtcatggacgaaacgtcagtggtcgtggtggctttggtggcagccgtggtggtggtgga
tatggtggcagtggggatggctatcgtggatttggtaatgatggaagcaattttggaggt
ggtggaagctacaatgagtttggcagttacaacaatgagtcttcaaattttggacccacg
aagggaggaaattttggaggcagaagctctggcccctgtggcggtggaggccagtgcttt
gcaaaaccacgaaaccaaggtgactatggtggttccagcagcagcagtagctatggcagt
ggcagattttaa
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