Pongo pygmaeus (Bornean orangutan): 129006591
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Entry
129006591 CDS
T10128
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X4
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
129006591 (JMJD1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppyg03036
]
129006591 (JMJD1C)
Chromosome and associated proteins [BR:
ppyg03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
129006591 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
129006591
NCBI-ProteinID:
XP_054292409
LinkDB
All DBs
Position
8:79067217..79428916
Genome browser
AA seq
2358 aa
AA seq
DB search
MQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQMTF
LDDVVHSLLKGENIGITSRRRSRASQNVNAVHSHYTRAQANSPRPAMNSQAAVPKQNTHQ
QQQQRSIRPNKRKGSDSSIPDEEKMKEEKYDYISRGENPKGKNKHLMNKRRKPEEDEKKL
NMKRLRTDNVSDFSESSDSENSNKRIIDNSSEQKPENELKNKNTSKINGEEGKPHNNEKA
REETLKDSQPPWDQIQEDKKHEEAEKRKSVDTQLQEDMIIHSSEQSTVSDHNSNDLLPQE
CNMDKTHTMELLPKEKFVSRPPTPKCVIDITNDTNLEKVAQENSSTFGLQTLQKMDPNVS
DSKHSIANAKFLETAKQDSDQSWVSDVVKVDLTQSSVTNASSGNDHLNMEKEKYVSYISP
LSAVSVMEDKLHKRSPPPETIKSKLNTSVDTHKIKSSPSPEVVKPKITHSPDSVKSKATY
VNSQATGERRLANKIEHELSRCSFHPIPTRSSTLETTKSPLIIDKNEHFTVYRDPALIGS
ETGANHISPFLSQHPFPLHSSSHRTCLNPGTHHPALTPAPHLLAGSSSQTPLPTINTHPL
TSGPHHAVHHPHLLPTVLPGVPTASLLGGHPRLESAHASSLSHLALAHQQQQQLLQHQSP
HLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPENAVNAEASLRRNSPS
PWLHQPTPVTSADGIGLLSHIPVRPSSAEPHRPLKITAHSSPPLTKTLVDHHKEELERKA
FMEPLRSVASTSAKNDLDLNRSQTGKDCHLHRHFVDPVLNQLQRPPQETGERLNKYKEEH
RRILQESIDVAPFTTKIKGLEGERENYSRVASSSSSPKSHIIKQDMDVERSVSDLYKMKH
SVPQSLPQSNYFTTLSNSVVNEPPRSYPSKEVSNIYGDKQSNALAAAAANPQTLTSFITS
LSKPPPLIKHQPESEGLVGKIPEHLPHQIASHSVTTFRNDCRSPTHLTVSSTNTLRSMPA
LHRAPVFHPPIHHSLERKEGSYSSLSPPTLTPVMPVNAGGKVQESQKPPTLIPEPKDSQA
NFKSTSEQSLTEMWRPNNNLSKEKTEWHVEKSSGKLQAAMASVIVRPSSSTKTDSMPAMQ
LASKDQVSERSSAGAHKTDCLKLAEAGETGRIILPNVNSDSVHTKSEKNFQAVSQGSVPS
SVMSAVNTMCNTKTDVITSAADTTSVSSWGGSEVISSLSNTILASTSSECVSSKSVSQPV
AQKQECKVSTTAPVTLASNKTGSVVQPSSGFSGTTDFIHLKKHKAALAAAQYKSSNVSET
EPNAIKNQTLSASLPLDSTVICSTINKANSVGNGQASQTSQPNYHTKLKKAWLTRHSEED
KNTNKMENSGNSVSEIIKPCSVNLIASTSSDIQNSVDSKIIVDKYVKDDKVNRRKAKRTY
ESGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEIEEDLKPNGVLSRSAKEKS
KLKLQSNSNTGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRECRLIRSKKG
EEPAHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAMSLWTHENYEDDELDIETS
KYILDIIGDKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQK
CGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHT
LREKYGIKSHCHCTNKQNLQVGNFPTMNGVSQVLQNVLNHSNKISLCMPESQQQNTPQKS
EKNGGSSPESDVGTDNKLTPPESQSPLHWLADLAEQKAREEKKENKELTLENQIKEEREQ
DNSESPNGRTSPLVSQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSMGAPSSKSG
RTMPNILDDIIASVVENKIPPSKTSKINVKPELKEEPEESITSAVDENNKLYSDIPHSWI
CEKHILWLKDYKNSNNWKLFKECWKQGQPAVVSGVHKKMNISLWKAESISLDFGDHQADL
LNCKDSIISNANVKEFWDGFEEVSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLL
KSLPLPEYCNPEGKFNLASHLPGFFVRPDLGPRLCSAYGVVAAKDHDIGTTNLHIEVSDV
VNILVYVGIAKGNGILSKAGILKKFEEEDLDDILRKRLKDSSEIPGALWHIYAGKDVDKI
REFLQKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPA
GALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQELRLLKEEINYDDKLQVKNILYHAVKE
MVRALKIHEDEVEDMEEN
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtccttattccttaaatggatacagagtgagagtatatagacaagactctgcc
acccagtggtttactggcataattactcatcatgatctcttcacccgcaccatgatcgtt
atgaatgatcaggtactagaaccacagaatgtcgatccttctatggttcaaatgaccttt
ctagatgatgttgttcactctttgttaaaaggtgaaaatattggcattacatcacgacgc
aggtctcgtgccagtcaaaacgtcaacgctgttcacagccattatacacgtgcccaagca
aatagtcccagaccagcaatgaactcccaagctgctgtaccaaaacagaatacgcaccag
caacagcaacaaagaagtatccgtccaaataagaggaagggctcagatagcagtatacca
gatgaagagaagatgaaagaggaaaaatatgattatatatcacgaggagaaaatcctaaa
ggtaaaaacaaacacttgatgaataaaagaaggaaacctgaggaggatgaaaagaaacta
aatatgaaaagacttcgaactgacaatgtttcagacttttctgagagcagtgactcagaa
aattcaaataagagaataatagataattcctcagaacagaagccagagaatgaattgaaa
aataaaaatacttcaaaaataaatggagaagaaggaaaaccccataataatgagaaggca
agagaagagaccctaaaagatagccagcctccctgggatcaaatacaggaagataaaaaa
catgaagaagcagagaagcggaagtctgttgacactcagcttcaagaagatatgattatc
cattcgtcagaacaatccacagtttctgatcataattctaatgatttacttcctcaggaa
tgcaatatggataaaacacataccatggaattgctaccaaaggagaagtttgtgtccaga
ccacccacaccaaaatgtgttattgatattacaaatgacactaatttagaaaaggtggct
caggaaaactcaagtacctttggccttcagacacttcagaaaatggatcctaatgttagt
gattcaaaacactctattgcaaatgcaaaattcttggaaacagcaaaacaagattctgac
cagagctgggtcagtgatgtagttaaagtggatctaacccaatcaagtgttacaaatgct
tcttcaggaaatgatcacttgaacatggaaaaagagaagtatgtctcttacatttctcct
ttaagtgcagtttctgtcatggaagataagctgcataagcgaagtccacctccagagact
ataaaatctaaacttaatacttcagtagatactcacaagataaaatccagcccatcacct
gaagttgtgaaacccaaaataactcattctcctgattctgtaaagtctaaggccacttat
gtgaacagccaagctactggtgaaagaagactggcaaataagatagaacatgagctatca
agatgcagttttcatccaattcctactcgaagcagtacattagaaactacaaagagtcct
cttatcattgataaaaatgagcattttacagtttacagagatcctgcacttattgggtca
gaaacaggagctaatcatatttcacctttcctaagccagcatccttttcctcttcactcc
tcatctcatagaacctgtttaaatccaggtacccatcatcctgccttaactcctgcaccc
catttactagccggatcatctagtcaaactccattacctaccattaacactcatcctctg
actagtggtccacaccatgctgttcatcaccctcatttacttcccactgtgttacctgga
gtgcctactgcctccttacttggtggccacccacgactagagagtgctcatgccagcagc
ttgagccacttagcactagcacaccagcaacaacaacagttgttacagcaccagtcacct
catcttcttggacaagcccatccttccgcttcatataatcagcttggactttatccaatt
atttggcagtatccaaatggaacacatgcatactcaggacttggtttgccttcttctaag
tgggttcacccagaaaatgcagttaatgctgaagcttcattaaggaggaattctcccagt
ccttggctacatcagcccacccctgtgacctcagcagatggtattggattacttagtcac
attcctgtcagaccttccagtgcagagcctcatcggcctcttaaaattacagcccattcc
agtccaccattgacaaaaactttagtagatcatcataaggaagaattagaaaggaaagct
tttatggaaccattacggtctgttgcatccacatcagccaaaaatgacctggatctaaat
aggtcacagactggaaaagattgtcacttacataggcattttgtggatccagtattaaat
caattacagaggccaccccaggagactggagagaggttaaacaaatacaaagaggaacac
cgtcgaattcttcaagaaagtattgatgttgctccctttacaactaaaatcaagggactt
gagggtgagagagagaattattccagagtggcatcatcatcttccagtcctaaaagccat
atcatcaaacaagatatggatgtagaacgctcagtatcagatctttataaaatgaagcac
tcagtgcctcagagtttaccccaaagtaactatttcactacattgtctaatagtgtggtc
aatgaaccaccaagatcatacccatccaaagaagtttcaaatatttacggtgataaacag
agtaatgcccttgcagcggcagcagctaatcctcaaactctgacttcatttataacatct
ctttcaaagcctccacctttgattaaacaccaaccagaaagtgaaggtttagtaggcaag
ataccagaacatcttccgcatcaaattgcatctcactcagtaacaaccttcagaaatgat
tgcaggagtcctacccatttgacagtttcttctacaaatacactccgcagtatgcctgca
ttacatagagcaccagtatttcacccaccaatccatcacagcctggaaagaaaggaaggc
agctatagtagcctttcccctccaactttaactccagtgatgccagtaaatgctggtggt
aaagttcaagaatcacagaagcctccaactctaatacctgagccaaaagactctcaggca
aattttaagagtacttcagaacagagtttgacagagatgtggagacctaataataacctc
agcaaagagaaaactgaatggcatgtggagaaaagcagcggaaagttacaggctgctatg
gcatctgtcattgtgcgtccatcttctagtacaaaaactgatagtatgccagcaatgcag
ttagcttctaaagatcaagttagtgaaagatcttcagctggggcacataaaacagattgc
ctcaaactagcagaagccggagaaactggaagaatcattttgccaaatgtgaattcagac
agtgttcacacaaaatctgaaaaaaactttcaggctgtctcacagggcagtgttcccagt
tcagtcatgtctgctgtaaatacgatgtgtaataccaaaacggatgtaatcacatctgct
gccgatactaccagtgtttccagctggggtggttcagaagtaatttcctctttatcaaat
accattttggcctctacatcatcagaatgtgtatcttcaaaaagtgtcagtcagccagtg
gctcaaaaacaagaatgcaaggtcagcaccacagcaccagttacattagccagtaataag
acaggaagtgttgttcaacccagttctgggttctcaggcacaactgattttatccattta
aaaaagcacaaggcagcattggccgcagctcagtataaaagtagtaatgtcagtgagact
gaacctaatgctataaaaaatcagacactttcagcctcccttcctctggatagcactgta
atctgtagtacaattaacaaagcaaactctgtaggaaatgggcaagcttcccagacaagt
caaccaaactaccatactaaactgaaaaaggcctggctcaccagacattcagaagaagat
aaaaatactaataaaatggaaaattcagggaattctgtatcagaaattattaagccatgt
tctgtcaacttaatagcctctacatctagtgatatacaaaatagtgtagatagtaagatc
atagttgataaatatgtaaaagatgataaagtcaataggagaaaagccaaaagaacttat
gaatctggctctgaaagtggagactcagatgaaagtgaaagcaagtcagagcaaaggact
aaaagacaacctaagccaacttacaaaaagaagcaaaatgatttgcaaaagagaaaaggt
gaaatagaagaagatttgaaacccaatggagttctcagcaggagtgccaaagaaaaaagt
aaactgaagttgcaaagcaacagtaatactggcattcctcgttcagtattgaaagattgg
cgtaaagtcaagaagctgaagcaaactggggaatcctttttacaggatgactcctgctgt
gagatagggcctaatttacaaaagtgtcgagaatgtagacttattcgcagtaaaaaagga
gaagaaccagctcactcaccagtattttgtagattttactactttagacggttgtcattt
agtaaaaacggagtagttagaatagatggtttctcttctcctgaccaatatgatgatgaa
gctatgagtttgtggacacatgaaaattatgaagatgatgaactagatatagagacttct
aaatatatcttggatataataggtgataagttctgtcaattagtaacatctgaaaaaaca
gctttgtcctgggtgaaaaaggatgccaaaattgcctggaaaagagcagtgagaggagtc
cgggagatgtgtgatgcatgtgaagcaacattgtttaacattcactgggtctgccaaaaa
tgtggatttgtggtctgcttagattgttacaaggcaaaggaaaggaagagttctagagat
aaagaactatatgcttggatgaagtgtgtgaagggacagcctcatgatcacaaacattta
atgccaacccaaattatacctggttctgttttgacagatcttctagatgccatgcacact
cttagggaaaaatatggtattaaatcccattgtcattgtactaacaaacagaatttacaa
gttggaaattttcctacaatgaatggtgtatctcaagttttacagaatgttcttaatcac
agtaataaaatttctctgtgcatgcctgagtctcagcagcaaaatactcctcagaagtct
gagaaaaatggtggcagcagcccagagagtgatgtaggcacagataacaagttaactcct
ccagaatcccagtcaccactgcactggttagcagatcttgcagagcaaaaagccagagag
gaaaaaaaagaaaacaaagaacttacccttgaaaaccaaattaaagaagaaagagaacaa
gacaactctgaatctccaaatggcagaacatcacctcttgtgtcccagaataatgaacaa
ggctcaaccttacgggatttgctgactacaacagctggaaagctacgtgtggggtctaca
gatgctggcattgcctttgccccagtatattcaatgggagccccaagtagcaaaagtgga
cggactatgcctaacattcttgatgacataattgcttcagttgttgaaaacaaaattcca
ccaagtaaaacctccaagataaatgtaaaaccagagcttaaagaagagcctgaagaaagc
ataacatctgcagtggatgaaaataataaattatacagtgatataccacattcttggatc
tgtgagaagcatattttatggcttaaggattataagaatagcaataattggaagcttttc
aaagaatgttggaaacaaggacagcctgcagtggtttctggtgtgcataagaaaatgaac
attagcctatggaaggcggaatcaattagtcttgattttggagaccaccaagctgatctc
ctgaactgcaaagatagcatcatttcaaatgccaatgttaaggaattctgggatggtttt
gaagaagtttcaaaacggcagaaaaacaaaagtggagaaacagttgttttaaagttgaaa
gattggccttcaggagaagacttcaagactatgatgccagcaagatacgaagatctttta
aaaagtctgccattgccagaatattgtaatccagaaggaaaattcaatttggcctctcat
ttgccaggattttttgtacgtcctgatctaggacccaggttgtgcagtgcctatggtgta
gtcgctgctaaagatcatgatataggaacaacaaatctccatattgaagtttctgatgtt
gtaaatattctagtctatgttggcatagcaaaaggaaatggcattctctcaaaagcagga
attctcaagaaatttgaggaagaagatttggatgacattttaaggaaaagattgaaggac
tcaagtgaaatacctggtgctctgtggcatatttatgctgggaaagatgttgacaagata
agggaatttcttcaaaagatttcaaaagaacaaggccttgaagttctaccagaacatgat
ccaatacgtgaccaaagttggtatgtgaacaaaaagctccgtcaaaggctgcttgaagaa
tatggagtcagaacctgtactcttattcagttccttggtgatgctattgttttgccagca
ggagcacttcatcaggttcagaattttcacagctgtattcaggtaactgaagattttgtg
tctccagaacatcttgtagagtcatttcatttaacacaggaactgagacttttgaaggaa
gaaatcaattatgatgataaactacaggttaaaaatattttgtatcatgcagtcaaagaa
atggtgagagccttgaagatacacgaggatgaagtagaggatatggaagaaaattaa
DBGET
integrated database retrieval system
