KEGG   Pongo pygmaeus (Bornean orangutan): 129008019
Entry
129008019         CDS       T10128                                 
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
  KO
K10140  DNA damage-binding protein 2
Organism
ppyg  Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03420  Nucleotide excision repair
ppyg04115  p53 signaling pathway
ppyg04120  Ubiquitin mediated proteolysis
ppyg05161  Hepatitis B
ppyg05169  Epstein-Barr virus infection
ppyg05200  Pathways in cancer
ppyg05202  Transcriptional misregulation in cancer
ppyg05210  Colorectal cancer
ppyg05212  Pancreatic cancer
ppyg05213  Endometrial cancer
ppyg05214  Glioma
ppyg05216  Thyroid cancer
ppyg05217  Basal cell carcinoma
ppyg05218  Melanoma
ppyg05220  Chronic myeloid leukemia
ppyg05222  Small cell lung cancer
ppyg05223  Non-small cell lung cancer
ppyg05224  Breast cancer
ppyg05225  Hepatocellular carcinoma
ppyg05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:ppyg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    129008019 (DDB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    129008019 (DDB2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    129008019 (DDB2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    129008019 (DDB2)
   05202 Transcriptional misregulation in cancer
    129008019 (DDB2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    129008019 (DDB2)
   05212 Pancreatic cancer
    129008019 (DDB2)
   05225 Hepatocellular carcinoma
    129008019 (DDB2)
   05226 Gastric cancer
    129008019 (DDB2)
   05214 Glioma
    129008019 (DDB2)
   05216 Thyroid cancer
    129008019 (DDB2)
   05220 Chronic myeloid leukemia
    129008019 (DDB2)
   05217 Basal cell carcinoma
    129008019 (DDB2)
   05218 Melanoma
    129008019 (DDB2)
   05213 Endometrial cancer
    129008019 (DDB2)
   05224 Breast cancer
    129008019 (DDB2)
   05222 Small cell lung cancer
    129008019 (DDB2)
   05223 Non-small cell lung cancer
    129008019 (DDB2)
  09172 Infectious disease: viral
   05161 Hepatitis B
    129008019 (DDB2)
   05169 Epstein-Barr virus infection
    129008019 (DDB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ppyg04121]
    129008019 (DDB2)
   03400 DNA repair and recombination proteins [BR:ppyg03400]
    129008019 (DDB2)
Ubiquitin system [BR:ppyg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     129008019 (DDB2)
DNA repair and recombination proteins [BR:ppyg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      129008019 (DDB2)
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_Aladin WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_WDR3_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd NBCH_WD40 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_EML PEP5_VPS11_N Beta-prop_ACSF4 WD_LRWD1 HMw1_D2
Other DBs
NCBI-GeneID: 129008019
NCBI-ProteinID: XP_054295648
LinkDB
Position
9:complement(19955737..19980601)
AA seq 427 aa
MAPKKRPETQKTSEIVLRPRNMRSRSPRELEPEAKKLCAKGSGPSRRCDSDCLWAGLAGP
QILPPCRSIVRTLHQHKLGRASWPSVQQGLQQSFLHTLDSYRILQKAAPFDRRATSLAWH
PTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGT
TRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRM
HKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDG
ARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPN
FKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMGYHVLIWSQ
EEARTRK
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggctcccaagaaacgcccagaaacccagaagacctccgagattgtattacgccccagg
aacatgaggagcaggagtccccgggagctggagcccgaggccaagaagctctgtgcgaag
ggctccggtcctagcagaagatgtgactcagactgcctctgggcggggctggctggccca
cagatcctgccaccatgccgcagcatcgtcaggaccctccaccagcataagctgggcaga
gcttcctggccatctgtccagcaggggctccagcagtcctttttgcacactctggattct
taccggatattacaaaaggctgccccctttgataggagggctacatccttggcgtggcac
ccgactcaccccagcaccgtggctgtgggttccaaagggggagatatcatgctctggaat
tttggcatcaaggacaaacccaccttcatcaaagggattggagctggagggagcatcact
gggctgaagtttaaccctctcaataccaaccagttttacgcctcctcaatggagggaaca
actaggctgcaagactttaaaggcaacattctacgagtttttgccagctcagacaccatc
aacatctggttttgtagcctggatgtgtctgctagtagccgaatggtggtcacaggagac
aacgtggggaatgtgatcctgctgaacatggacggcaaagagctttggaatctcagaatg
cacaaaaagaaagtgacgcatgtggccctgaacccatgctgtgattggttcctggccaca
gcctccgtagatcaaacagtgaaaatttgggatctgcgccaggttagagggaaagccagc
ttcctctactcgctgccgcacaggcatcctgtcaacgcagcttgtttcagtcccgatgga
gcccggctcctgaccacagaccagaagagcgagatccgagtttactctgcttcccagtgg
gactgccccctgggcctgatcccgcaccctcaccgtcacttccagcacctcacacccatc
aaggcagcctggcatcctcgctacaacctcattgtcgtgggccgatacccagaccctaat
ttcaaaagctgtaccccttatgaattgaggacgatcgatgtgttcgatggaaactcaggg
aagatgatgtgtcagctctatgacccagaatcttctggcatcagttcgcttaatgagttc
aatcccatgggggacacgctggcctctgcaatgggttaccacgttctcatctggagccag
gaggaagccaggacacggaaatga

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