Pongo pygmaeus (Bornean orangutan): 129008031
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Entry
129008031 CDS
T10128
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04136
Autophagy - other
ppyg04140
Autophagy - animal
ppyg04211
Longevity regulating pathway
ppyg05010
Alzheimer disease
ppyg05014
Amyotrophic lateral sclerosis
ppyg05016
Huntington disease
ppyg05017
Spinocerebellar ataxia
ppyg05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129008031 (ATG13)
04136 Autophagy - other
129008031 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
129008031 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
129008031 (ATG13)
05014 Amyotrophic lateral sclerosis
129008031 (ATG13)
05016 Huntington disease
129008031 (ATG13)
05017 Spinocerebellar ataxia
129008031 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
129008031 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppyg04131
]
129008031 (ATG13)
03029 Mitochondrial biogenesis [BR:
ppyg03029
]
129008031 (ATG13)
Membrane trafficking [BR:
ppyg04131
]
Autophagy
Autophagosome formation proteins
ULK complex
129008031 (ATG13)
Atg1 complex
129008031 (ATG13)
Mitochondrial biogenesis [BR:
ppyg03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
129008031 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
129008031
NCBI-ProteinID:
XP_054295669
LinkDB
All DBs
Position
9:complement(20528872..20586760)
Genome browser
AA seq
550 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
IYPSVEDSQEVCTTSFSTSPPSQCVFTVTKAHFQTPTPVVMDTLRVPMAGLAFSHQLSSS
RLSYQPAALGVGSADLAYPVVFAAGLNATHLHQLMVPGKEGGVPLAPNQPVHGTQADQER
LATCTPSDGTHCAATPSSSEDTETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTL
TSLDIPFAMFAPKNLELEDTDPMVNPPDSPETESPLQGSLHSDGSSGGSSGNTHDDFVMI
DFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVR
EFDAFVETLQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcccaggacagaaaggacctggacaagtttattaaatttttt
gccctcaagactgtccaagtgattgtccaggctcggcttggtgaaaagatttgcactcgt
tcatcatcttctccaacgggttcagattggttcaacttagcaatcaaagacatcccagag
gttacacatgaggcaaagaaggcactggcagggcaactgcctgcggtcgggaggtccatg
tgtgtggagatttcacttaagacttctgagggagattccatggagctggaaatatggtgt
cttgaaatgaatgaaaagtgtgataaagaaatcaaagtttcctacacggtgtacaacaga
ctgtcattgctgctgaagtctcttcttgctataactagggtgacaccagcctataggctc
tccagaaaacaagggcatgaatatgtcatattatacaggatatattttggagaagttcag
ctgagtggcttaggagaaggcttccagacagttcgtgttgggacagtgggcacccctgtg
ggcaccatcactctttcttgtgcttacagaattaacttggcattcatgtccaccaggcaa
tttgagaggaccccacctatcatggggattattattgatcactttgtggaccgtccctat
cccagctcctctcccatgcacccctgcaattacagaactgctggtgaggacactggagta
atatacccgtctgtagaagactctcaagaagtgtgtaccacctctttttccacctccccg
ccatcccagtgtgtgtttactgtcacaaaggcacattttcagacccctactcctgtggtg
atggacaccctgagggtccccatggcaggactggccttttcccatcaactctcaagctct
cgcctttcctatcagcctgctgccctgggcgttggatcagctgacctggcttatccagta
gtgtttgctgctggcttaaatgctacacaccttcaccagctgatggttcctgggaaggaa
ggtggggtaccccttgctcccaaccagcctgtccatggtacccaggctgaccaggagaga
ctggcaacctgcaccccttctgacggaacccactgtgctgccacaccctccagtagtgag
gatactgaaaccgtatcaaacagcagcgaaggacgggcctcccctcacgatgtgttggag
accatctttgtccgaaaagtgggggcttttgtcaacaaacccattaaccaggtgaccctg
acgagtttggatataccctttgccatgtttgctcccaagaatttggagctggaggatacc
gatccaatggtgaatcctccagattccccagagactgaatctcctctccagggcagcctg
cactcagatggctccagcgggggcagcagtggcaatacccatgatgactttgttatgata
gactttaaaccagctttttctaaagatgacattcttccgatggacctggggaccttctat
cgggagtttcagaacccacctcagctgagcagcctctccatagatattggagcacagtcc
atggctgaagacttggactcattaccagagaagctggctgtgcatgagaagaatgtccgc
gagtttgatgcctttgtggaaaccctgcagtaa
DBGET
integrated database retrieval system
