Pongo pygmaeus (Bornean orangutan): 129008308
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Entry
129008308 CDS
T10128
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppyg04515
]
129008308 (CLSTN1)
Cell adhesion molecules [BR:
ppyg04515
]
Cadherins
Cadherin related
129008308 (CLSTN1)
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
FAM176
EphA2_TM
Toxin_R_bind_N
V_ATPase_I
Cadherin_C_2
SID-1_RNA_chan
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
129008308
NCBI-ProteinID:
XP_054296391
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All DBs
Position
1:221404280..221500947
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AA seq
981 aa
AA seq
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MLRRPAPALAPAARLLLVGLLFGGGVWAARVNKHKPWLEPTYHGIVTENDNTVLLDPPLI
ALDKDAPLRFAESFEVTVTKEGEICGFKIHGQNVPFDAVVVDKSTGEGVIRSKEKLDCEL
QKDYSFTIQAYDCGKGPDGTNVKKSHKATVHIQVNDVNEYAPVFKEKSYKATAIEGKQYD
SILRVEAVDADCSPQFSQICSYEIITPDVPFTVDKDGYIKNTEKLNYGKEHQYKLTVTAY
DCGKKRAAEDVLVKISIKPTCTPGWQGWNNRIEYEPGTGALAVFPNIHLETCDEPVASVQ
ATVELETSHIGKGCDRDTYSETSLHRLCGAAAGTAELLPSPSGSLNWTVGLPTDNGHDSD
QVFEFNGTQAVRIPDGVVSVSPKEPFTISVWMRHGPFGRKKETILCSSDKTDMNRHHYSL
YVHGCRLIFLLRQDPSEEKKYRPAEFHWKLNQVCDEEWHHYVLNVEFPSVTLYVDGTSHE
PFSVTEDFPLHPSKIETQLVVGACWQEFSGVENDNETEPVTVASAGGDLHMTQFFRGNLA
GLTLRSGKLADKKVIDCLYTCKEGLDLQVPEDSGRGVQIQAHPSQLVLTLEGEDLGELDK
AMQHVSYLNSRQFPTPGIRRLRITSTIKCFNEATCISVPPVDGSVMVLQPEEPKISLSGV
HHFARAASEFESSEGVFLFPELRIISTITREVEPEGDGAEDPTVQESLVSEEIVHDLDTC
EVTVEGEELNHEQESLEVDMARLQQKGIEVSSSELGMTFTGVDTMASYEEVLHLLRYRNW
HARSLLDRKFKLICSELNGRYISNEFKVEVNVIHTANPMEHANHMAAQPQFVHPEHRSFV
DLSGHNLANPHPFAVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENE
MDWDDSALTITVNPMETYEDQHSSEEEEEEEEEEESEDGEEEDDITSAESESSEEEEGEQ
GDPQNATRQQQLEWDDSTLSY
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgccgccccgcgcccgcgctggccccggccgcccggctgctgctggtcgggctg
ctgttcggcggcggggtctgggccgcgcgagttaacaagcacaagccctggctggagccc
acctaccacggcatagtcacagagaatgacaacacggtgctcctcgaccccccgctgatc
gcgctggacaaagatgcgcctttgcgatttgcagagagttttgaggtgacagtcaccaaa
gaaggtgagatttgtggatttaaaattcacgggcagaatgtcccctttgatgcagtggta
gtggataaatctactggtgagggagtcattcgctccaaagagaaactggactgtgagctg
cagaaagactattcattcaccatccaggcctatgattgtgggaagggacctgatggcacc
aacgtgaaaaagtctcataaagcaactgtccatattcaggtgaacgacgtgaacgagtac
gcgcccgtgttcaaggagaagtcctacaaagccacggccatcgaggggaagcagtacgac
agcattttgagggtggaggccgtggatgccgactgctcccctcagttcagccagatttgc
agctacgaaatcatcactccagacgtgccctttacggtcgacaaagatggttatataaaa
aacacagagaaattaaactatgggaaagaacatcagtataagctgaccgtcaccgcctat
gactgtgggaagaagagagccgcagaagatgttttggtgaagatcagcattaagcccacc
tgcacccccgggtggcaaggatggaacaacaggattgagtatgagccgggcacaggagcg
ttggccgtctttccaaatatccacttggagacatgtgacgagccagttgcctcagtacag
gccacagtggagctagaaaccagccacatagggaaaggctgcgaccgagacacctactcg
gagacgtccctccaccggctctgtggtgcggccgcgggcactgccgagctgctgccatcc
ccgagtggctccctcaactggaccgtgggcctccccaccgacaatggccacgacagcgac
caggtgtttgagttcaacggcacccaggcagtgaggatcccggatggcgttgtgtcggtc
agccccaaagagccgttcaccatctcggtgtggatgagacatgggccattcggcaggaag
aaggagacaattctttgcagttctgataaaacagatatgaatcggcaccactactccctc
tacgtccacgggtgccggctgatcttcctcctccgtcaggatccttctgaggagaagaaa
tacagacctgcagagttccactggaagttgaatcaggtctgtgatgaggaatggcaccac
tacgtcctcaatgtggaattcccaagtgtgactctctatgtggatggcacgtcccacgag
cccttctctgtgactgaggatttcccgctccatccatccaagatagaaactcagcttgtg
gtgggggcttgctggcaagagttttcaggagttgaaaatgacaatgaaactgagcctgtg
actgtggcctctgcaggtggcgacctgcacatgacccagtttttccgaggcaatctggct
ggcttaactctccgttctgggaaactcgcggataagaaggtgatcgactgtctgtatacc
tgcaaggaggggctggacctgcaggtccccgaagatagtggcagaggcgtgcagatccaa
gcacaccccagccagttggtattgaccttggagggagaagacctcggggaattggataag
gccatgcagcacgtctcgtacctgaactccaggcagttccccacgcccggaattcgcagg
ctcagaatcaccagcacaatcaagtgttttaacgaggccacctgcatttcggtcccccca
gtagatggctccgtgatggttttacagcccgaagagcccaagatcagcctgagcggcgtc
caccattttgcccgagcggcttctgaatttgaaagctcagaaggggtgttccttttccct
gagcttcgcatcatcagcaccatcacaagagaagtggagcctgaaggggacggggctgag
gaccccacagttcaagaatcactggtgtccgaggagatcgtgcacgacctggatacctgt
gaggtcacggtggagggagaggagctgaaccacgagcaggagagcctagaggtggacatg
gcccgcctgcagcagaagggcatcgaagtgagcagctctgagctgggcatgaccttcaca
ggtgtggacaccatggccagctacgaggaggttttgcacctgctgcgctatcggaactgg
cacgccaggtccttgcttgaccggaagtttaagctcatctgctcagagctgaatggccgc
tacatcagcaacgaatttaaggtggaggtgaacgtaatccacacggccaaccccatggaa
cacgccaaccacatggctgcccagccgcagttcgtgcacccggaacaccgctccttcgtc
gacctgtcaggccacaacctggccaacccccacccgtttgcagttgtccccagcactgcg
accgttgtgattgtggtgtgcgtcagcttcctggtgttcatgattatcctgggggtattt
cggatccgggccgcacatcagcggaccatgcgggatcaggacaccgggaaggagaacgag
atggactgggacgactccgccctgaccatcaccgtcaaccccatggagacctatgaggac
cagcacagcagtgaggaggaggaggaagaggaggaggaagaggagagcgaggacggcgag
gaagaagatgacatcaccagcgcagagtcggagagcagcgaggaggaggagggggagcag
ggcgacccacagaacgcaacccggcagcagcagctggagtgggatgactccaccctcagc
tactga
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