Pongo pygmaeus (Bornean orangutan): 129009055
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Entry
129009055 CDS
T10128
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129009055 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppyg03021
]
129009055 (TAF5L)
03036 Chromosome and associated proteins [BR:
ppyg03036
]
129009055 (TAF5L)
Transcription machinery [BR:
ppyg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129009055 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
129009055 (TAF5L)
Chromosome and associated proteins [BR:
ppyg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
129009055 (TAF5L)
STAGA complex
129009055 (TAF5L)
TFTC complex
129009055 (TAF5L)
SAGA complex
129009055 (TAF5L)
SLIK complex
129009055 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
TFIID_NTD2
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_WDR19_1st
PEP5_VPS11_N
PROPPIN
Beta-prop_IP5PC_F
Ge1_WD40
WD_LRWD1
Nbas_N
Mala_s_1-like
vATP-synt_AC39
Motif
Other DBs
NCBI-GeneID:
129009055
NCBI-ProteinID:
XP_054297712
LinkDB
All DBs
Position
1:19681233..19714046
Genome browser
AA seq
589 aa
AA seq
DB search
MKRVRTEQIQMAVSCYLKRRQYVDSDGPLKQGLRLSQTAEEMAANLTVQSESGCANIVSA
APCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSPKSTVESFY
SRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFKLRAFLDNKYVVRLQEDSYNYLIRYLQ
SDNNTALCKVLTLHIHLDVQPAKRTDYQLYASGSSSRSENNGLEPPDMPSPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSK
KLKSEPHQVDVSRIHLACDILEEEDDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIR
NTYCSAPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagtgcgtaccgagcagattcagatggcagtgtcctgctacctcaaacgccgg
cagtacgtggactcagatggtcccctgaagcaaggactgcggctgtcacagactgctgaa
gagatggcggccaatctaacagtgcaatcagaatctggttgtgccaacatagtgtctgca
gccccttgccaggcagaaccccagcaatatgaagtacagtttggacgactgcggaatttt
ctcactgattctgattcccagcatagccacgaagtgatgcctctcctctatcctctcttt
gtctacctccatctcaacctggtccaaaacagtccgaagagcacagtggaaagtttttac
agccgcttccatggaatgtttctgcagaatgctagccagaaggatgtcattgagcagcta
cagaccactcaaaccatccaggacatcctatctaacttcaagcttcgagcattcctagat
aacaagtacgtggtccgtctccaagaagacagctataactaccttatccgctacctccaa
agtgacaacaatactgccctgtgcaaagtcctcaccttacatattcatcttgacgtgcag
cctgccaagagaacagactatcagctgtatgccagtggcagctcctcccgcagtgagaac
aacggtttggagccccctgacatgcccagcccgattctgcagaacgaggctgccctagag
gtcttacaggagagcattaagcgcgtcaaggatgggcctccctccctcactaccatctgc
ttctatgccttctataacacagagcagctgttgaacactgcagaaatctcccccgatagc
aagctgcttgctgctgggtttgacaactcctgtataaaactttggagtttacgatccaag
aagttaaaatcagagccccatcaagtagacgtgtcccgcatccatttggcttgtgatatt
ctggaggaggaggatgatgaggatgataatgcaggcacggagatgaagatactgcgggga
cactgtggaccagtgtacagcacgaggttccttgcggacagctcagggttgctctcttgt
tctgaagacatgtccatcagatactgggatctggggagtttcaccaacactgtgttgtac
caaggacatgcctatcctgtgtgggatctggacatcagtccatatagcctgtacttcgcc
agcgggtcccacgaccgcaccgccaggctgtggtcatttgatcggacgtacccgctgagg
atatatgcagggcacctggcagatgtggactgtgtcaaattccaccctaattcaaactac
ttggccacaggctcaaccgacaagaccgttcggctgtggagcgctcagcaggggaactcg
gtgaggcttttcacaggccaccgcggccccgtgctttctctcgccttttctcctaacggt
aagtacttggcgtctgctggcgaggaccagcggttgaagctgtgggacttggcctctggg
accctttataaagagctgagaggccacacagacaatatcaccagcctcaccttcagtcca
gacagcggcttgattgcctctgcctccatggacaactcggtgcgcgtctgggacatcagg
aacacttactgcagtgcacctgccgacggctcctccagcgagctcgtgggcgtgtacacc
gggcaaatgagcaacgtcctgagcgtgcagttcatggcctgtaaccttcttctggtgact
ggaattacacaagaaaatcaggaacattaa
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