Pongo pygmaeus (Bornean orangutan): 129009226
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Entry
129009226 CDS
T10128
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppyg03036
]
129009226 (CHD5)
Chromosome and associated proteins [BR:
ppyg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129009226 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
129009226
NCBI-ProteinID:
XP_054297759
LinkDB
All DBs
Position
1:225037009..225116150
Genome browser
AA seq
1954 aa
AA seq
DB search
MRGPLGTEEELPRLFAEEMENEDEMSEEEDGGLEAFDDFFPVEPVSLPKKKKPKKLKENK
CKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKKKDEDE
DDNDDGCLKEPKSSGQLMAEWGLDDVDYLFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIP
MSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTISPPLAISPPQVPQSVPIR
KAKTKEGKGPGVRKKIKASKDGKKKGKGKKMAGLKFRFGGISSKRKKGSSSEEDEREESD
FDSASIHSASVRSECSAALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDT
CPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCR
VCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEP
PAPFMVGLPGPDVEPSLPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYR
NYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNH
SFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDTRLPKRLL
KKGKKLRDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTD
TILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTY
TGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIE
WACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNN
LEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYY
KFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLV
KSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQ
EAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQN
KKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEEL
FKDDVEGMMSQGQRPVTPIPDVQSSKGGNLAASAKKKHGSTPPGDNKDVEDSSVIHYDDA
AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYW
EKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDED
EDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWG
MPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHV
LTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKPGEVISSDPNTPVPASPAHLLP
APLGLPDKMEAQLGYMEEKDPGAQKPRQSLEVQALPAALDRVEGEDKHESPASKERAREE
RPEETEKAPPSPEQLPREEVLPEKEKILDKLELSLIHSRGDGSELRPDDTKAEEKEPIET
QQNGDKEEDEEGKKEDKKGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRH
DYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEVHKGNYLEMKNKFLARRFKLLEQAL
VIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKV
LNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGSS
QMYSNNFGPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
5865 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccactgggcaccgaggaggagctgccgcggctgttcgccgaggagatggag
aacgaggacgagatgtcagaagaagaagatggtggtcttgaagccttcgatgattttttc
cctgtggagcccgtgagccttcctaagaagaagaaacccaagaagctcaaggaaaacaag
tgtaaagggaagcggaagaagaaagaggggagcaatgatgagctatcagagaatgaagag
gatctggaagagaagtcggagagtgaaggcagtgactactccccgaataaaaagaagaag
aagaaactcaaggacaagaaggagaaaaaagccaagcgaaaaaagaaggatgaggatgag
gatgataatgatgatggatgcttaaaggagcccaagtcctcggggcagctcatggccgag
tggggcctggatgacgtggactacctgttctcagaggaggactaccacacgctgaccaac
tacaaggccttcagccagttcctcaggccactcattgccaagaagaacccgaagatcccc
atgtccaaaatgatgaccgtcctgggcgccaagtggcgggagttcagcgccaacaacccc
ttcaagggcagctccgcggcagcagcggcggcggcggtggctgcggctgtagagactgtc
accatctcccctccgctagccatcagccccccgcaggtgccccagtctgtgcctatccgc
aaagccaagaccaaggagggcaaagggcctggagtaaggaagaagatcaaagcctccaaa
gatgggaagaaaaagggcaaagggaaaaagatggccgggctcaagttccgcttcggaggg
atcagcagcaagaggaagaaaggctcctcgagtgaagaagatgagagggaggagtcggac
ttcgacagcgccagcatccacagcgcctccgtgcgctccgagtgctctgcagccctgggc
aagaagagcaagaggaggcgcaagaagaagaggattgatgatggtgacggctatgagaca
gaccaccaggattactgtgaggtgtgccagcagggtggggagatcatcctgtgcgacacc
tgcccgagggcctaccatctcgtgtgcctggacccagagctggagaaggctcccgagggc
aagtggagctgcccccactgtgagaaggaggggatccagtgggagccgaaggacgacgac
gacgaagaggaggagggcggctgcgaggaggaggaggacgaccacatggagttctgccgc
gtgtgcaaggacgggggcgagctgctctgctgcgacgcctgcccttcctcctaccacctg
cattgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgcccgcgctgt
acttgccccccactgaagggcaaagtccagcggattctacactggaggtggacggagccc
cctgcccccttcatggtggggctgccggggcctgacgtggagcccagcctccctccaccc
aagcccctggagggcatccctgagagagagttctttgtcaagtgggcagggctgtcctac
tggcactgctcctgggtgaaggagctacagctggagctgtaccacacggtgatgtatcgc
aactaccaaagaaagaacgacatggacgagccgcccccctttgactacggctctggggat
gaagacggcaagagcgagaagaggaagaacaaggaccccctctatgccaagatggaggag
cgcttctatcgctatggcatcaagccagagtggatgatgattcaccgaatcctgaaccac
agctttgacaaaaagggggatgtgcactacctgatcaagtggaaagacctgccctacgac
cagtgcacctgggaaatcgatgacattgacatcccctactacgacaacctcaagcaggcc
tactggggccacagggagctgatgctgggagaagacaccaggctgcccaagaggctgctc
aagaagggcaagaagctgagggacgacaagcaggagaagccgccggacacgcccattgtg
gacccgacggtcaagttcgacaagcagccgtggtacatcgactccacaggcggcacactg
cacccgtaccagctggagggcctcaactggctgcgcttctcttgggcccagggcactgac
accatcctggccgatgagatgggtctgggcaagacggtgcagaccatcgtgttcctttac
tccctctacaaggagggccactccaaagggccctacctggttagcgcacccctctccacc
atcatcaactgggaacgcgagtttgagatgtgggcgcctgacttctatgtggtcacctac
acgggggacaaggagagccgctcggtgattcgggagaacgagttttcctttgaggacaat
gccattcggagtgggaagaaggtgttccgtatgaagaaagaagtgcagatcaaattccat
gtgctgctcacctcctatgagctcatcaccatcgaccaggccatcctgggctccatcgag
tgggcctgcctggtggtagacgaggcccaccgcctcaagaacaaccagtccaagtttttt
agggtcttaaacagctacaagattgattacaagctgctgctgacagggactccccttcag
aacaacctggaggagctgttccatctcctcaacttcctgactccagagaggttcaacaac
ctggagggcttcctggaggagtttgctgacatctccaaggaagaccagatcaagaagctg
catgacctgctggggccgcacatgctcaggcggctcaaggctgatgtgttcaagaacatg
ccggccaagaccgagctcatcgtccgggtggagctgagccagatgcagaagaagtactac
aagttcatcctcacacggaactttgaggcgctgaactccaaggggggcgggaaccaagta
tcgctgctcaacatcatgatggacctgaaaaagtgctgcaaccacccctacctcttcccc
gtggccgccgtggaggcccctgtcttgcccaatggctcctacgatggaagctccctggtc
aagtcttcagggaagctcatgctgctacagaagatgctgaagaaactgcgggatgagggg
caccgcgtgctcatcttctcccagatgaccaagatgctggacctcctggaggacttcctg
gagtacgaaggctacaagtatgagcggattgatggtggcatcaccgggggcctccgacag
gaggcgatcgacagattcaatgcccccggggcccagcagttctgcttcctcctctcaacc
cgggcaggcggcctgggcatcaacctggccacggcggacactgtcatcatctacgactcg
gactggaacccgcacaatgacatccaggccttcagccgcgcccaccgcatcggccagaac
aagaaggtgatgatctaccgcttcgtgactcgggcctcggtggaggagcgcatcacgcag
gtggccaagcgcaagatgatgctcacccacctggtggtgcggcccggcctcggctccaag
tcggggtccatgaccaagcaggagctggacgacatcctcaagttcggcacggaggagctc
ttcaaggacgatgtggagggcatgatgtctcagggccagaggccggtcacacccatccct
gatgtccagtcctccaaaggggggaacttggccgccagtgcaaagaagaagcacggtagc
accccgccaggtgacaacaaggacgtggaggacagcagtgtgatccactatgacgatgcg
gctatctccaagctgctggaccggaaccaggacgctacagacgacacggagctacagaac
atgaacgagtacctgagctccttcaaggtggcgcagtacgtggtgcgcgaggaggacggc
gtggaggaggtggagcgggaaatcatcaagcaggaggagaacgtggatcccgactactgg
gagaagctgctgcggcaccactacgagcagcagcaggaggacctggcccgcaacctgggc
aagggcaagcgcatccgcaagcaggtcaactacaacgacgcctcccaggaggaccaggag
tggcaggatgagctctctgataaccagtcagaatattccattggctctgaggatgaggat
gaggactttgaagagagaccggaagggcagagtggacgacgacaatcccggaggcagctg
aagagtgacagggacaagcccctgcccccgcttctcgcccgagttggtggcaacatcgag
gtgctgggcttcaacgcccgacagcggaaggcctttctgaacgccatcatgcgctggggc
atgcccccccaggacgccttcaactcccactggctggtgcgggaccttcgagggaagagc
gagaaggagtttagagcctatgtgtccctcttcatgcggcacctgtgtgagccgggggcg
gatggtgcagagaccttcgcagacggcgtgccccgggagggcctctccaggcagcacgtg
ctgacccgcatcggggtcatgtcactagttaggaagaaggttcaggagtttgagcatgtc
aacgggaagtacagcaccccagacttgatccctgaggggcccgagggcaagaagccgggc
gaggtgatctcctcggaccccaacacaccagtgcccgccagccctgcccacctcctgccg
gccccgctgggcctgccagacaaaatggaagcccagctgggctacatggaggagaaggac
ccaggggcgcagaagccaaggcagtccctggaagtccaggcccttccagctgccttggat
agagtggagggtgaggacaagcacgagagcccagccagcaaggagagagcccgagaggag
cggccagaggagacggagaaggccccgccctccccggagcagctgccgagagaggaggtg
cttcctgagaaggagaagatcctggacaagctggagctgagcttgatccacagcagaggg
gatggttccgaactcaggccagatgacaccaaggctgaggagaaggagcccattgaaaca
cagcaaaatggtgacaaagaggaagatgaggaggggaagaaggaggacaagaaggggaaa
ttcaagttcatgttcaacatcgcggacgggggcttcacggagttgcacacgctgtggcag
aatgaggagcgggctgctgtatcctctgggaaaatctacgacatctggcaccggcgccat
gactactggctgctggctggtattgtgacgcatggctacgcccgctggcaggacatccag
aatgacccgcggtacatgatcctcaatgagcccttcaagtctgaggtccacaagggcaac
tacctggagatgaagaacaagttcctggcccgcaggtttaagctgctggagcaggcgttg
gtcattgaggagcagctccggagggctgcgtacctgaacatgacccaggaccccaaccac
cccgccatggccctcaacgcccgcctggctgaagtggagtgcctcgccgagagccaccag
cacctgtccaaggagtcccttgctgggaacaagcctgccaatgccgtcctgcacaaggtc
ctgaaccagctggaggagctgctgagcgacatgaaggccgacgtgacccggctgccgtcc
atgctgtcccgcatccccccggtggctgcccggctgcagatgtcggagcgcagcatcctg
agccgcctgaccaaccgcgccggggaccccaccatccagcagggcgctttcggctcttcc
cagatgtacagcaacaactttgggcccaacttccggggccctggaccgggagggattgtc
aactacaaccagatgcccctggggccctatgtgaccgatatctag
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integrated database retrieval system
