Pongo pygmaeus (Bornean orangutan): 129009377
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Entry
129009377 CDS
T10128
Symbol
HNRNPA1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03040
Spliceosome
ppyg05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129009377 (HNRNPA1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129009377 (HNRNPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyg03019
]
129009377 (HNRNPA1)
03041 Spliceosome [BR:
ppyg03041
]
129009377 (HNRNPA1)
Messenger RNA biogenesis [BR:
ppyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129009377 (HNRNPA1)
mRNA cycle factors
Common to processing body (P body) and stress granule
129009377 (HNRNPA1)
Spliceosome [BR:
ppyg03041
]
Common components
Common spliceosomal components
hnRNP proteins
129009377 (HNRNPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
129009377
NCBI-ProteinID:
XP_054298164
LinkDB
All DBs
Position
10:51939722..51946707
Genome browser
AA seq
372 aa
AA seq
DB search
MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV
TYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGS
GDGYNGFGNDGGYGGGGPGYSGGSRGYGSGGQGYGNQGSGYGGSGSYDSYNNGGGGCFGG
GSGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPYGGGGQYFAKPRNQGGYGSS
SSSSSYGSGRRF
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagtcggagtctcctaaagagcccgaacagctgaggaagctcttcattggaggg
ttgagctttgaaacaaccgatgagagcctgaggagccattttgagcaatggggaacgctc
acggactgtgtggtaatgagagatccaaacaccaagcgctccaggggctttgggtttgtc
acatacgccactgtggaggaggtggatgcagctatgaatgcaaggccacacaaggtggat
ggaagagttgtggaaccaaagagagctgtctcgagagaagattctcaaagaccaggtgcc
cacttaactgtgaaaaagatatttgttggtggcattaaagaagacactgaagaacatcac
ctaagagattattttgaacagtatggaaaaattgaagtgattgaaatcatgactgaccga
ggcagtggcaagaaaaggggctttgcctttgtaacctttgacgaccatgactccgtcgat
aagattgtcattcagaaataccatactgtgaatggccacaactgtgaagttagaaaagcc
ctgtcaaagcaagagatggctagtgcttcatccagccaaagaggtcgaagtggttctgga
aactttggtggtggtcgtggaggtggtttcggtgggaatgacaactttggtcgtggagga
aacttcagtggtcgtggtggctttggtggcagccgtggtggtggtggatatggtggcagt
ggggatggctataatggatttggtaatgatggtggttatggaggaggcggccctggttac
tctggaggaagcagaggctatggaagtggtggacagggttatggaaaccagggcagtggc
tatggcgggagtggcagctatgacagctataacaacggaggcggaggctgctttggcggt
ggtagtggaagcaattttggaggtggtggaagctacaatgattttggcaattacaacaat
cagtcttcaaattttggacccatgaagggaggaaattttggaggcagaagctctggcccc
tatggcggtggaggccaatactttgcaaaaccacgaaaccaaggtggctatggcagttcc
agcagcagcagtagctatggcagtggcagaagattttaa
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