Pongo pygmaeus (Bornean orangutan): 129010065
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Entry
129010065 CDS
T10128
Symbol
LHX5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
129010065 (LHX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppyg03000
]
129010065 (LHX5)
Transcription factors [BR:
ppyg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
129010065 (LHX5)
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Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Prok-RING_1
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
129010065
NCBI-ProteinID:
XP_054299767
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All DBs
Position
10:complement(112141882..112151656)
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AA seq
402 aa
AA seq
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MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
SSSSLKEGSLNSVSSCTDRSLSPDLQDALQDDPKETDNSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGSNYDFFAHGP
PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGA
LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcactgtgccggttgcgagcggcccatcctcgaccgctttctgctgaacgtg
ctggaccgcgcgtggcacatcaaatgtgttcagtgctgcgagtgcaaaaccaacctctcg
gagaagtgcttctcgcgcgagggcaagctctactgcaaaaatgactttttcaggcgcttt
ggcaccaaatgcgccggctgcgcgcaaggcatctcgcccagcgacctggtgcgcaaggcc
cggagcaaagtctttcacctcaactgtttcacctgcatggtgtgtaacaagcagctgtcc
accggcgaggagctctacgtcatcgacgagaacaagttcgtgtgcaaagacgactacctg
agctcatccagcctcaaggagggcagcctcaactcagtgtcatcctgtacggaccgcagt
ttgtccccggacctccaggacgcactgcaggacgaccccaaagagacggacaactcgacc
tcgtcggacaaggagacagccaacaacgagaacgaggagcagaactcgggcaccaagcgg
cgcggcccccgcaccaccatcaaggccaagcagctggagacgctcaaggctgcctttgcc
gccacgcccaagcccacgcgccacatccgcgagcagctggcgcaggagaccggcctcaac
atgcgcgtcatccaggtgtggtttcagaaccgacggtccaaagaacgcaggatgaaacag
ctgagcgccctgggcgcccggaggcacgccttcttccggagtccgcggcgcatgcgtccg
ctgggcggccgcttggacgagtctgagatgttggggtccaccccgtacacctactacgga
gactaccaaggcgactactacgcgccgggaagcaactacgacttcttcgcgcacggcccg
ccttcgcaggcgcagtccccggccgactccagcttcctggcggcctctggccccggctcg
acgccgctgggcgcgctggagccgccgctcgccggcccgcacgccgcggacaaccccagg
ttcaccgacatgatctcgcacccggacacaccgagcccagagccgggcctgccgggcgcg
ctgcaccctatgccaggcgaggtgttcagcggcgggcccagcccgcccttcccaatgagc
ggcaccagcggctacagcggacccctgtcgcatcccaacccggagctcaacgaggccgcc
gtgtggtaa
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