Pongo pygmaeus (Bornean orangutan): 129010794
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Entry
129010794 CDS
T10128
Symbol
PAN2
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129010794 (PAN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyg03019
]
129010794 (PAN2)
Enzymes [BR:
ppyg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
129010794 (PAN2)
Messenger RNA biogenesis [BR:
ppyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129010794 (PAN2)
mRNA degradation factors
3'-5' decay
Pan complex
129010794 (PAN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAN2_N
UCH_1
UCH
RNase_T
WD40_like
WD40_CDC20-Fz
Beta-prop_THOC3
Motif
Other DBs
NCBI-GeneID:
129010794
NCBI-ProteinID:
XP_054301255
LinkDB
All DBs
Position
10:complement(54104890..54121694)
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AA seq
1208 aa
AA seq
DB search
MNFEGLDPGLAEYAPAMHSALDPVLDAHLNPSLLQNVELDPEGVALEALPVQESVHIMEG
VYSELHSVVAEVGVPVSVSHFDLHEEMLWVGSHGGHATSFFGPALERYSSFQVNGSDDIR
QIQSLENGILFLTKNNLKYMARGGLIIFDYLLDENEDMHSLLLTDSSTLLVGGLQNHILE
IDLNTVQETQKYAVETPGVTIMRQTNRFFFCGHTSGKVSLRDLRTFKVEHEFDAFSGSLS
DFDVHGNLLAACGFSSRLTGLACDRFLKVYDLRMMRAITPLQVHVDPAFLRFIPTYTSRL
AIISQSGQCQFCEPTGLANPADIFHVNPVGPLLMTFDVSASKQALAFGDSEGCVHLWTDS
PEPSFNPYSRETEFALPCLVDSLPPLDWSQDLLPLSLIPVPLTTDTLLSDWPAANSAPAP
RRAPPVDAEILRTMKKVGFIGYAPNPRTRLRNQIPYRLKESDSEFDSFSQVTESPVGREE
EPHLHMVSKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEP
VRCLIQNHLCQKEFCLACELGFLFHMLDLSRGDPCQGNNFLRAFRTIPEASALGLILADS
DEASGKGNLARLIQRWNRFILTQLHQDMQELEVPQAYRGAGGSSFCSSGDSVIGQLFSCE
MENCSLCRCGSETVRASSTLLFTLSYPDDKTGKNYDFAQVLKRSICLDQNTQAWCDTCEK
YQPTIQTRNIRHLPDILVINCEVNSSKEADFWRMQAEVAFKMAVKKHSGEVSKNKEFALA
DWKELGSPEGVLVCPSIEELKNVWLPFSIRMKMTKNKGLDVCNWTDGDEMQWGPARAEEE
HGVCVYDLMATVVHILDSRTGGSLVAHIKVGETYHQRKEGVTHQQWYLFNDFLIEPIDKH
EAVQFDMNWKVPAILYYVKRNLNSRYNLNIKNPIEASVLLAEASLARKQRKTHTTFIPLM
LNEMPQIGDLVGLDAEFVTLNEEEAELRSDGTKSTIKPSQMSVARITCVRGQGPNEGIPF
IDDYISTQEQVVDYLTQYSGIKPGDLDAKISSKHLTTLKSTYLKLRFLIDIGVKFVGHGL
QKDFRVINLMVWQGSFKSLLVPKDQVLDTVYLFHMPRKRMISLRFLAWYFLDLKIQGETH
DSIEDARTALQLYRKYLELSKNGTEPESFHKVLKGLYEKGRKMDWKVPEPEGQTSPKNAA
VFSSVLAL
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgagggtctggaccctggactggcagagtatgccccagccatgcattctgcc
ctggaccctgtcctggatgcccacctgaacccaagtctgctacagaatgtggagctggac
ccagagggagtggccttggaggctcttcccgtccaggaatcagtgcacataatggaaggt
gtctactctgaattgcacagcgtggtggctgaagtgggtgtacctgtttccgtctcccac
tttgacttgcacgaggagatgctgtgggtggggagccacgggggccatgccacttcattt
tttggcccagccttggagcgctactcatcctttcaagtcaatggcagtgatgatattcgg
cagatccagagcctggagaatggtatcctttttctcaccaagaacaacctcaagtatatg
gcccgtgggggcctcattatatttgattacctgctggatgagaatgaagatatgcacagt
ctcctactgactgacagcagcactctactcgttggtgggctgcagaatcacatactagag
attgatcttaacactgtccaggagactcagaagtatgcagtagagacgcctggagtcacc
atcatgagacagacaaatcgcttcttcttctgcggccacacgtctggcaaggtttccctg
agagacctccgtacttttaaggtagaacatgagtttgatgccttctcaggaagtctgtca
gactttgatgtgcatggcaacctgctagctgcctgtggcttctccagccgcctcactggc
ctggcctgcgaccgtttcctcaaggtgtatgatttgcgcatgatgcgtgccatcacacca
cttcaagtacatgtggatcctgccttcttgcgcttcattcctacatatacttctcgtctt
gctatcatctctcagtcagggcagtgccaattctgtgaacccacaggcctggccaaccca
gcagatatctttcatgtgaatcctgtggggcctctgctaatgacatttgatgtgtcagcc
agcaagcaggctctggcctttggggattctgagggctgtgtgcacctctggactgattcc
ccagagccttccttcaacccctactcccgtgagactgagtttgctttgccgtgtctcgtg
gactcactgcctcctctggactggagccaggacctgctgcctctttccctcatccctgtc
ccactcaccactgacacacttctctctgattggcctgctgccaactctgctccagctccc
aggcgagcaccacctgtggatgcagagattctgcgcaccatgaagaaggtgggcttcatt
ggctatgcacccaatccccgcaccaggctgcgcaatcagataccttacagactcaaggag
tcagacagtgaatttgacagcttcagccaggtcactgagtcaccagtaggacgagaagag
gaaccacatctccacatggtttctaagaaataccgcaaggtgaccatcaaatattccaag
ctagggctggaggactttgacttcaaacactacaataagaccttgtttgctggattagag
ccccacattcccaacgcttactgtaactgcatgatccaggtgctctatttcctggagcct
gtacgctgtctaattcaaaaccacctttgccagaaggagttctgtctggcatgtgagctg
ggcttcctgtttcacatgttggacctctctcgtggtgacccttgccagggcaataatttt
cttcgggcattccgtactattcctgaggcctcagcccttggtctgatcctggctgactca
gatgaggcctcaggcaagggcaatctggccaggctcattcagaggtggaatcgcttcatt
ctcactcaactgcatcaagatatgcaggagctggaagtaccacaggcttatcgaggtgct
ggaggcagcagcttttgctcatcgggggactctgttattgggcagctcttcagctgtgag
atggagaactgcagcctctgccgctgtggcagtgagaccgtgcgcgcctcatccaccctg
cttttcacactctcctaccctgatgataaaactgggaagaactatgactttgctcaggtg
ctgaagcgaagcatctgcctggaccagaatacacaggcctggtgtgacacctgtgaaaag
taccagcccacgattcagacccgcaacatccgccatctgccagatattcttgtcatcaat
tgtgaggtgaacagctcaaaagaggctgatttctggagaatgcaggctgaggttgccttc
aagatggcagtaaagaaacacagtggggaagtctccaagaacaaggaatttgctttggct
gattggaaggaactagggagtccagagggtgtgctggtgtgtccctccattgaggagttg
aagaacgtctggcttcctttctccattcgcatgaagatgaccaaaaacaaagggctggat
gtttgcaattggactgatggggatgagatgcagtggggcccagccagggcagaggaggag
catggtgtctgtgtgtatgacctgatggctactgtggtacacatcctggactcacgcaca
gggggcagcctggtggctcacatcaaagttggagagacctaccaccagcgcaaggagggc
gttactcaccagcagtggtatctgttcaatgactttcttattgaacctattgataagcat
gaagctgtgcagtttgacatgaattggaaagtacctgcaatcctttattatgtcaaacgg
aatctcaattccagatacaacctgaacatcaagaaccctattgaggcaagtgtcttgctg
gctgaagcctcgctggcacggaagcagcggaaaacacatactacctttattccactgatg
ctgaatgagatgccacagattggggacctggtgggtctggatgctgagtttgtcaccctt
aatgaggaggaagcagagttacgcagtgatggtaccaagtctaccattaaaccaagccag
atgtcagtagccaggattacctgtgttcggggccagggacccaatgagggtatccccttc
attgatgactacatctctacccaggagcaggtggtggattacttgactcaatactcgggt
ataaagcctggtgacctcgatgccaaaatttcctccaagcacctaacaactctcaagtct
acctacttaaagcttcgttttctcattgacattggagtcaagtttgtgggtcatggcctg
cagaaggacttccgggtcatcaacctgatggtttggcagggctcttttaagagtcttctt
gtgcccaaggaccaagtccttgacactgtctacctgttccatatgccccgaaaacgaatg
atttccctgcgattccttgcttggtactttctggacctgaagattcaaggggaaacccat
gacagtattgaggatgcccgcacagcccttcagctctaccgaaagtatctggagctaagc
aaaaatggcactgagcctgagtctttccacaaggtgctcaagggtctttatgagaagggc
agaaagatggactggaaggtgcctgagcctgagggccaaacaagtcccaagaatgcagct
gtcttctcctcagtgctggcgctctga
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integrated database retrieval system
