Pongo pygmaeus (Bornean orangutan): 129010892
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Entry
129010892 CDS
T10128
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X2
KO
K12821
pre-mRNA-processing factor 40
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129010892 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppyg03041
]
129010892 (PRPF40B)
Spliceosome [BR:
ppyg03041
]
Complex A
U1 snRNP components
U1 related factors
129010892 (PRPF40B)
Complex B
129010892 (PRPF40B)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
DUF4936
WW_2
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
129010892
NCBI-ProteinID:
XP_054301494
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All DBs
Position
10:47258106..47279970
Genome browser
AA seq
899 aa
AA seq
DB search
MSVPDSGPRPPAAPAPFPPGPPMMPPPFDTLGLEMPPPGIPPPFPPMGLPPMSQRPPAIP
PMPPGILPPMLPPMGAPPPLTQIPGMVPPMMPGMLMPAVPVTAATAPGADTASSAVAGTG
PPRALWSEHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKEYKSDTGKPYYY
NNQSKESRWTRPKDLDDLEVLVKQEAAGKQQQQLPQTLQPQPPQPQPDPPPAPPGPTPVP
TGLLEPEPGGSEDCDVLEATQPLEQGFLQQLEEGPSSSGQHQPQQEEEESKPEPERSGLS
WSNREKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQRE
KEEKEEARLRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTFGELEVWAVVPERDRKEVYD
DVLFFLAKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLMDNPSFAQDHQL
QNMDKEDALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQTFLDELHETGQLHS
MSTWMELYPAVSTDVRFANMLGQPGSTPLDLFKFYVEELKARFHDEKKIIKDILKDRGFC
VEVNTAFEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEAREREREKEEARRMRRREAA
FRSMLRQAVPALELGTAWEEVRERFVCDSAFEQITLESERIRLFREFLQVLEQTECQHLH
TKGRKHGRKGKKHHRKRSHSPSGSESEEEELPPPSLRPPKRRRRNPSESGSEPSSSLDSV
ESGGVALGGRGSPSSHLLGADHGLRKAKKPKKKTKKRRHKSNSPESETDPEEKAGKESNE
KEQEQDKDRELQQAELPNRSPGFGIKKEKTGWDTSESELSEGELERRRRTLLQQLDDHQ
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttcccgattctggtccccggcccccagcagcgcctgcccccttcccaccgggg
ccccccatgatgccaccacccttcgacacactggggctggagatgccccctccagggatc
cccccaccctttcctccgatggggctaccccccatgagtcagagaccaccagctataccc
cccatgccacctggcatcctgcccccaatgcttccaccaatgggggcaccaccaccactc
acacagataccaggaatggtacctccgatgatgccaggaatgctgatgccagcggtgcct
gtcaccgcagcgacggctccgggtgcggacaccgccagctctgctgtggctgggacaggc
cctccgagggccctatggagtgagcatgtggccccagatgggcgcatctactactacaat
gctgacgacaagcagtccgtgtgggagaagcccagcgtgctcaagtccaaggcagagctg
ctcctgtctcagtgtccctggaaagagtacaagtcggacacaggcaaaccttattactat
aacaaccagagtaaagagtctcgctggacccggcccaaggatctggatgacctagaggtt
ctagtcaaacaagaggctgcagggaaacagcagcagcagctgccacagacacttcagcca
cagccgcctcagccacagcctgaccccccacctgcacctcctggccccaccccagtgccc
acaggcctcctggaacctgagccaggtgggagtgaagactgtgatgtgttggaggccacc
cagcccctggaacaggggttcctgcagcagctggaggagggccccagcagttctggacag
catcagccacagcaggaggaggaggaatcaaagccagaaccagagaggtctggcctcagt
tggagcaaccgggagaaggcaaagcaggcattcaaggaactgctgagggacaaggctgtc
ccctctaatgcctcatgggaacaggccatgaagatggtggtcaccgacccccgttacagt
gccttgcctaaactgagtgagaaaaagcaggcattcaatgcctacaaggcgcagcgggag
aaggaggagaaggaggaggcccggctaagggccaaagaggccaagcagaccctgcagcat
ttcctggagcagcacgaacgcatgacctccaccacccgctaccggcgggcagaacagacc
tttggggagctggaggtctgggctgtggtccctgagagggatcgaaaagaggtttatgat
gatgtcctcttcttcctggccaagaaggagaaggaacaggccaagcagctccggcgccgc
aatatccaggccctaaagagcatcctggatgggatgagtagtgtcaacttccaaaccaca
tggtcccaggcccagcagtacctcatggataaccccagctttgctcaggaccatcagctg
cagaacatggacaaggaagatgcactgatctgttttgaggagcacatccgagctttggag
agggaagaggaggaggaacgggagcgggcccggcttcgggagcgacgccaacaacgcaag
aatcgggaggccttccagacctttctggacgagctgcacgagacagggcagctgcactct
atgtccacctggatggagctatatccagcagtcagcactgatgtccgctttgccaacatg
ctgggccagccgggctccacccctctggacttgttcaagttctatgtggaggagttgaag
gcacgattccatgatgaaaagaagatcattaaggacatccttaaggaccggggcttctgc
gtggaggtgaacacggcctttgaggacttcgcccacgtcataagctttgacaagagggct
gccgcactggatgcaggcaacatcaagctgaccttcaatagtctgctggagaaagcagag
gcacgggagagggagcgggagaaggaggaggcacgcaggatgcggcgcagggaagctgcc
tttcgaagcatgctgaggcaggctgtgcctgctctggagctaggcactgcctgggaagag
gtccgtgagcgttttgtgtgtgactcagcctttgagcagatcaccctggagtcggagcgg
atccggctcttccgggagttcctacaggtgctggagcagactgaatgccagcacctccac
accaaaggccgaaagcatggcaggaaaggcaagaagcaccatcgcaagcgttcccactca
ccctcaggctctgagtcagaagaagaggagctgcccccaccatctctccggccccccaag
cggaggaggcggaacccctcagagtcaggctctgagccctcttcctcacttgattcagtt
gaaagtgggggtgttgcccttggaggacggggctccccttcctcccatcttcttggagca
gatcatggccttcggaaagccaagaaaccaaaaaagaaaactaagaagagaagacacaag
tcgaatagtcctgagagtgagacagaccctgaggagaaagctggcaaggagagcaatgag
aaagaacaagaacaggacaaggacagggagctccagcaggcagagctccctaaccgttcc
ccaggctttggaatcaagaaggagaagacaggctgggacacgtcagaaagtgagctgagt
gagggtgagctggagaggcggcggcggacactcctacagcagctggacgatcaccagtga
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