Pongo pygmaeus (Bornean orangutan): 129010914
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Entry
129010914 CDS
T10128
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03082
ATP-dependent chromatin remodeling
ppyg04714
Thermogenesis
ppyg05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129010914 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
129010914 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
129010914 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppyg03021
]
129010914 (SMARCD1)
03036 Chromosome and associated proteins [BR:
ppyg03036
]
129010914 (SMARCD1)
Transcription machinery [BR:
ppyg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129010914 (SMARCD1)
Chromosome and associated proteins [BR:
ppyg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129010914 (SMARCD1)
PBAF complex
129010914 (SMARCD1)
GBAF(ncBAF) complex
129010914 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
129010914
NCBI-ProteinID:
XP_054301542
LinkDB
All DBs
Position
10:47710388..47726249
Genome browser
AA seq
644 aa
AA seq
DB search
MPCAKMKVLLQAPLHQRSRVGVETGAEAVVRPPFQVLVFLPSAWGRPLTGPLYRRALLYG
FPSRTVKAGRRGQHAFSASRPALAHSLAALSLPCRPAGRGNRRALGGRSGGGGSSGSGSL
CSCIGGSGKMAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRS
PMPGAAYPRPGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQV
QQQAVQNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEA
LKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKR
KFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQ
PPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQR
MKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLST
ASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVG
NPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgccatgcgccaagatgaaggtattactccaagcccctcttcatcagaggtctcgagtc
ggggttgagactggggctgaggctgtggtccgtccccctttccaggtccttgtcttcctc
ccgtcggcctgggggcgcccgctcacggggcctctctatcgcagagctcttctctatggt
tttccctcccggaccgtgaaggcgggaaggcgtggccagcacgccttttccgctagtcgc
cccgctctagcccatagtctcgctgccctgagcctcccgtgccggccggccggccgggga
aacaggcgggcgctcggggggcgctcggggggcggggggagttccggttccggttctttg
tgcagctgcatcggcggctccgggaagatggcggcccgggcgggtttccagtctgtggct
ccgagcggcggcgccggagcctcaggaggggcgggcgcggctgctgccttgggcccgggc
ggaactccggggcctcctgtgcgaatgggcccggctccgggtcaagggctgtaccgctcc
ccgatgcccggagcggcctatccgagaccaggtatgttgccaggcagccgaatgacacct
cagggaccttccatgggaccccctggctatggggggaacccttcagtccgacctggcctg
gcccagtcagggatggatcagtcccgcaagagacctgcccctcagcagatccagcaggtc
cagcagcaggcggtccaaaatcgaaaccacaatgcaaagaaaaagaagatggctgacaaa
attctacctcaaaggattcgtgaactggtaccagaatcccaggcctatatggatctcttg
gcttttgaaaggaaactggaccagactatcatgaggaaacggctagatatccaagaggcc
ttgaaacgtcccatcaagcaaaaacggaagctgcgaattttcatttctaacactttcaat
ccggctaagtcagatgccgaggatggggaagggacggtggcttcctgggagcttcgggta
gaaggacggctcctggaggattcagccttgtccaaatatgatgccactaaacaaaagagg
aagttctcttccttttttaagtccttggtgattgaactggacaaagacctgtatgggcca
gacaaccatctggtagaatggcacaggaccgccactacccaggagaccgatggctttcag
gtgaagcggccgggagacgtgaatgtacggtgtactgtcctactgatgctggattaccag
cctccccagtttaaattagacccccgcctagctcgactcctgggcatccatacccagact
cgtccagtgatcatccaagcactgtggcaatatattaagacacataagctccaggaccct
catgagcgggagtttgtcatctgtgacaagtacctgcagcagatctttgagtctcaacgt
atgaagttttcagagatccctcagcggctccatgccttgcttatgccaccagaacctatc
atcattaatcatgtcatcagtgttgacccgaatgatcagaaaaagacagcttgttatgac
attgatgttgaagtggatgacaccttgaagacccagatgaattcttttctgctgtccact
gccagccaacaggagattgctactctagacaacaagatccatgagacaatagaaaccatc
aaccagctgaagactcagcgggagttcatgttgagctttgccagagaccctcagggtttc
atcaatgactggcttcagtcccagtgcagggacctcaagacaatgactgatgtggtgggt
aacccagaggaggagcgccgagctgagttctacttccagccctgggctcaggaggctgtg
tgccgatacttctactccaaagtgcagcagagacgacaagaattagagcaagccctggga
atccggaatacatag
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