Pongo pygmaeus (Bornean orangutan): 129011590
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Entry
129011590 CDS
T10128
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
129011590 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ppyg01009
]
129011590 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppyg04515
]
129011590 (PCDH9)
Protein phosphatases and associated proteins [BR:
ppyg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129011590 (PCDH9)
Cell adhesion molecules [BR:
ppyg04515
]
Cadherins
Protocadherins
129011590 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
V_ATPase_I
Big_9
RCR
EphA2_TM
DUF6249
MAP17
DUF6377
7tm_3
Motif
Other DBs
NCBI-GeneID:
129011590
NCBI-ProteinID:
XP_054302685
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All DBs
Position
14:complement(75465753..76400964)
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AA seq
1237 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDVDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIIAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQCNSHSKSD
NIPVTPQKCPSSASFHIQENEESHYESQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLI
SHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSD
NCWMPPGLGPYQHPKSPLSTFAPQKEWVKKDKLVNGHTLTRAWKEDSNRNQFNDRKQYGS
NEGHFNNGSPMTDIPLANLKSYKQAGGAIESPKEHQL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattcc
gcaatagctcaagaacttatttacactattagagaggaattgcctgaaaatgtgcccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacagggaccagcgcc
agccttgtctacagactggtttctaaagctggggatgcccctttggtgaaagtatccagc
agcactggggaaattttcacaacctccaacagaatagacagagaaaaactctgtgctggc
gcctcatatgctgaggagaatgagtgtttctttgaacttgaggtggtgatcctccccaat
gatttcttcaggctgatcaaaataaaaataattgtcaaggataccaatgataatgccccc
atgtttccatctcctgtcatcaatatttccattccagaaaacactttgatcaacagccgc
tttccaattccatcagcaacagatcctgacacaggcttcaatggtgtacagcattatgaa
ttgttaaatgggcagagtgtttttggactagatatcgtggaaactccggagggagagaag
tggccacaattgattgttcagcaaaacttggatagagaacagaaagatacctatgtgatg
aaaatcaaagtagaggatggaggcactccacagaaatccagtacggccatactgcaggtc
acagtaagtgatgtaaatgacaacaggccggtgtttaaagagggtcaagtggaggtgcat
attccagagaatgctcccgtaggtacctctgtaattcagctccatgccactgatgcagat
ataggcagtaatgctgaaatccggtacatttttggtgcccaggtcgcccctgcaaccaaa
agactctttgctttaaataatactactgggctgattacagttcagaggtccttagataga
gaggagacagccattcacaaagtgacagtgctggctagtgacggcagctccactcctgct
cgagcaacggttaccatcaatgtcactgatgtaaatgataaccctcctaatatagacctc
aggtacattataagtcccatcaatggcactgtgtatttatctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaggacacagatgtgaatggcaaagtgatc
tgttttattgaaagagaggtcccatttcatttgaaggcagtatatgacaaccaatatttg
ttagagacctcttctttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcctctgattctgggaagcccagtttaaatcagactgccctggtaagggttaagcttgag
gatgaaaatgacaacccaccaattttcaaccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtgggttatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggaccgaatgcctccttctttgatctggaccgaaaa
acaggagttttgacagcctccagagtctttgacagagaagaacaagaacgattcattttt
acagtaactgccagggacaatgggacccctcccctccaaagccaagcggctgtgatagtt
actgttctggatgagaatgacaatagccccaagtttactcataatcattttcaatttttt
gtgtctgagaatctgccaaagtatagtactgtgggggtaatcacagtgacagatgcagat
gctggagagaataaagccgtgactctttccattctaaatgacaatgataattttgtgttg
gatccctattctggagtcataaagtcaaatgtctcatttgatagagagcagcagagttcc
tacacttttgatgtcaaagccactgatggaggacaaccacctcgttcctctactgcaaaa
gtcactatcaacgtcatggatgtcaatgacaacagcccagttgtcatttctccaccgtct
aatacttcctttaagttggtgcccctctcagccattcctggctccgtggtagcagaagtt
tttgcagtggatgttgacactggaatgaacgctgaactaaagtatactatagtgagtgga
aacaataaaggcttatttcggattgatccagtaacaggtaacattactctggaagaaaaa
ccggcacctactgatgtgggattgcatcgtttggtggtcaacataagtgacctggggtac
cctaagtctttgcatacgcttgtgcttgtattcctttatgttaatgacactgctggaaat
gcctcctatatctatgacttgatccgcaggactatggagaccccgttggacaggaacata
ggggatagtagccaaccctatcaaaatgaggactatctaaccatcatgattgccatcatt
gccggtgccatggtggtcatcgttgtgatctttgtcaccgttctggtgcgctgtcgccat
gcatcaaggttcaaagcagctcagaggagcaagcaaggtgccgaatggatgtccccaaac
caggagaacaagcaaaacaagaaaaagaaaagaaagaaaaggaagtctcccaaaagctct
cttttgaactttgttactatcgaagagtccaaacccgatgatgcagttcatgaacctatc
aatgggacaataagcctgccggctgaactggaggagcaaagtataggaagatttgactgg
ggcccggcacctccaacaacgttcaagcctaacagccctgacctggccaagcactacaaa
tctgcttctccacagcctgcttttcatctcaaaccagacactccagtttccgtgaaaaag
caccatgtgattcaggaactccctttggacaacacctttgtcgggggttgtgacaccctt
tctaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagtgtaactcacacagcaaaagtgac
aatattcctgtcactcctcagaaatgtcccagctccgcgagtttccacattcaggagaat
gaagaaagccattacgagtcgcagcgccgtgttacgtttcacctccctgatggctcccag
gaaagctgcagtgacagtggtctaggagaccatgagccggtgggtagtggaaccctgatc
tcacaccctcttcctctggttcagccacaggacgaattctatgaccaggcctctccggac
aagaggactgaagcagatggcaactctgatcccaactctgatgggcctttgggtccccga
ggattagctgaagctacagagatgtgcactcaagagtgcttggttttgggtcactctgat
aattgctggatgcctcctggcttgggtccatatcaacaccccaaatctcctctctcaacc
tttgcaccccagaaagaatgggtgaagaaggacaagcttgtgaatgggcacaccctgacc
agagcctggaaagaagacagcaacaggaatcagttcaatgaccgtaagcagtatggctcc
aacgaaggccatttcaacaatggcagccccatgacagacattcctctggcaaatctgaag
tcttataagcaagcaggaggtgctattgagagtcctaaggagcaccaactctaa
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