Pongo pygmaeus (Bornean orangutan): 129011719
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Entry
129011719 CDS
T10128
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppyg03000
]
129011719 (SOX1)
Transcription factors [BR:
ppyg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129011719 (SOX1)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
129011719
NCBI-ProteinID:
XP_054302855
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Position
14:122075486..122080269
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AA seq
390 aa
AA seq
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MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGGAKANQDRVKRPMNAFMVW
SRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYR
PRRKTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGAAAGGGY
AHVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHAHPH
NPQPMHRYDMGALQYSPISNSQGYMSASPSGYGGLPYGAAAAAAAAAGGAHQNSAVAAAA
AAAAASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAAAAA
AAAQSRLHSLPQHYQGAGAGVNGTVPLTHI
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgacctgcactcgcccggcggcgcccaggcccccacg
aacctctcgggccccgccggggcgggcggcggcgggggtggaggcgggggcggcggcggc
gggggcgccaaggccaaccaggaccgggtcaagcggcccatgaacgccttcatggtgtgg
tcccgcgggcagcggcgcaagatggcccaagagaaccccaagatgcacaactcggaaatc
agcaagcgcctgggggccgagtggaaggtcatgtccgaggccgagaagcggccgttcatc
gacgaggccaagcggctgcgcgcgctgcacatgaaggagcacccggattacaagtaccgg
ccgcgccgcaagaccaagacgctgctcaagaaagacaagtactcgctggccggcgggctc
ctggcggccggcgcgggtggcggcggcgcagccgtggccatgggcgtgggtgtgggcgtg
ggcgcggcggccgtgggccagcgcctggagagcccaggcgccgcggcgggcggcggctac
gcgcacgtcaacggctgggccaacggcgcctaccccggctcggtggcggcggcggcggcg
gccgcggccatgatgcaggaggcgcagctggcctacgggcagcacccgggcgcgggcggc
gcgcacccgcacgcgcaccccgcgcacccgcatccgcaccacccgcacgcacacccgcac
aacccgcagcccatgcaccgctacgacatgggcgcgctgcagtacagccccatctccaac
tcgcagggctacatgagcgcgtcgccctcgggctacggcggcctcccctacggcgccgcc
gccgccgccgctgccgctgcgggcggcgcgcaccagaactcggcagtggctgcggcggcg
gcggcggcggccgcgtcgtcgggcgccctgggcgcgctgggctctctggtgaagtcggag
ccgagcggcagcccgcccgccccggcgcactcgcgggcgccgtgccccggggacctgcgc
gagatgatcagcatgtacttgccggccggcgaggggggcgacccggcggcggcagcagcg
gccgcggcgcagagccggctgcactcgcttccgcagcactaccagggcgcgggcgcgggc
gtgaacggcacggtgcccctgacgcacatctag
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