Pongo pygmaeus (Bornean orangutan): 129011850
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Entry
129011850 CDS
T10128
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
129011850 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ppyg01009
]
129011850 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppyg04515
]
129011850 (PCDH20)
Protein phosphatases and associated proteins [BR:
ppyg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129011850 (PCDH20)
Cell adhesion molecules [BR:
ppyg04515
]
Cadherins
Protocadherins
129011850 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
129011850
NCBI-ProteinID:
XP_054303144
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All DBs
Position
14:complement(70343110..70349937)
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AA seq
952 aa
AA seq
DB search
MRGRANARSSRALGVSWCPATWHPRLDMGRLHRPRSSTSHRNLPHLFLFFLFVGPFSCLA
SYSRATELLYSLNEGLPAGVLIGSLAEDLRLLPRSAGRPDPQSQLPERTGAEWNPPLSFS
LASRGLSGQYVTLDNRSGELHTSAQEIDREALCVEGGGGTAWGGSVSISSSPSSDSCLLL
LDVLVLPQEYFRFVKVKIAIRDINDNAPQFPVSQISVWVPENAPVNTRLAIEHPAVDPDV
GINGVQTYRLLDYHGMFTLDVEENENGERTPYLIVMGALDRETQDQYVSIIIAEDGGSPP
LLGSATLTIGISDINDNCPLFTDSQINVTVYGNATVGTPIAAVQAVDKDLGTNAQITYSY
SQKVPQASKDLFHLDENTGVIKLFSKIGGSVLQSHKLTILANGPGCIPAVITALVSIIKV
IFRPPEIVPRYIANEIDGVVYLKELEPVNTPIAFFTIRDPEGKYKVNCYLDGEGPFRLSP
YKPYNNEYLLETTKPMDYELQQFYEVAVVAWNSEGFHAKRVIKVQLLDDNDNTPIFLQPL
IELTIEENNSPNAFLTKLYATDADSGERGQVSYFLGPDAPSYFSLDSVTGILTVSTQLDR
EEKEKYRYTVRAVDCGKPPRESVATVALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIG
VISVTDADAGQNGWVALSVVNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAIDGGE
PALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDAGMNAV
IAYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMV
NLFVNDTVSNESYIESLLRKEPEINIEEKEPQISIEPTHRKVESVSCMPTLVALSVISLG
SITLVTGMGIYICLRKGEKHPREDENLEVQIPLKGKIDLHMRERKPMDISNI
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccgagcgaatgcgcgcagctcacgggccctgggagtgagctggtgcccggca
acctggcacccgcgcctggatatggggcgtctacatcgtcccaggagcagcaccagccac
aggaacctgccgcatctgtttctgtttttcctcttcgtgggacccttcagctgcctcgcg
agttacagccgggctaccgagcttctgtacagcctaaacgagggactgcccgcgggggtg
ctcatcggcagcctggccgaggacctgcggctgctgccccggtctgcagggaggccggac
ccgcagtcgcagctgccagagcgcaccggtgctgagtggaacccccctctctccttcagc
ctggcctcccggggactgagtggccagtacgtgaccctagacaaccgctctggggagctg
cacacttcagctcaggagatcgacagggaggccctgtgtgttgaagggggcggagggact
gcgtggggcggcagcgtttccatctcctcctctccttcttctgactcttgtcttttgctg
ctggatgtgcttgtcctgcctcaggaatacttcaggtttgtgaaggtgaagatcgccatc
agagacatcaatgacaacgccccgcagttccctgtttcccagatctcggtgtgggtcccg
gaaaatgcacctgtaaacacccgattggccatagagcatcctgctgtggacccagatgta
ggcattaatggggtgcagacctatcgcttactggactaccatggtatgttcaccctggac
gtggaggagaatgagaatggggagcgcaccccctacctaattgtcatgggtgctttggac
agggaaacccaggaccagtatgtgagcatcatcatagctgaggatggtgggtctccacca
cttttgggcagtgccactctcaccattggcataagtgacattaatgacaattgccctctc
ttcacagactcacaaatcaatgtcactgtgtatgggaatgctacagtgggcaccccaatt
gcagctgtccaggctgtggataaagacttggggaccaatgctcaaattacttattcttac
agtcagaaagttccacaagcatctaaggatttatttcacctggatgaaaacactggcgtc
attaaacttttcagtaagattggaggaagtgttctgcagtcccacaagctcaccatcctt
gctaatggaccaggctgcatccctgctgtaatcactgctcttgtgtccattatcaaagtt
attttcagaccccctgaaattgtccctcgttacatagcaaatgagatagatggtgttgtt
tatctgaaagaactggaacccgttaacactcccattgcgtttttcaccataagagatcca
gaaggtaaatacaaggttaactgctacctggatggtgaagggccgtttaggttatcacct
tacaaaccatacaataatgaatatttactagagaccacaaaacctatggactatgagcta
cagcagttctatgaagtagctgtggtggcttggaactctgagggatttcatgccaaaaga
gtcattaaagtgcaacttttagatgacaatgataatactccaattttccttcaaccctta
atagaactaaccatcgaagaaaacaactcacccaatgcctttttgactaagctgtatgct
acagatgccgacagtggggagagaggccaagtttcatattttctgggacccgatgctcca
tcatatttttccttagacagtgtcacaggaattctgacagtttctactcagctggaccga
gaagagaaagaaaagtacagatacactgtcagagctgttgactgtgggaagccacccaga
gaatcagtagccactgtggccctcacagtgttggataaaaatgacaacagtcctcggttt
atcaacaaggacttcagcttttttgtgcctgaaaactttccaggctatggtgagattgga
gtaattagtgtaacagatgctgatgctggacaaaatggatgggtcgccctttctgtggtg
aaccagagtgatatttttgtcatagatacaggaaagggtatgctgagggctaaagtctct
ttggacagagagcagcaaagctcctatactttgtgggttgaagctattgatgggggtgag
cctgccctctcctctacagcaaaaatcacaattctccttctagatatcaatgacaaccct
cctcttgttttatttcctcagtctaatatgtcttatctgttagtactgccttctactctc
ccaggctccccggttacagaagtctatgctgtcgacaaagacgcaggcatgaatgctgtc
atagcttacagcatcatagggagaagaggtcctaggcctgagtccttcaggattgaccct
aaaactggcaacattactttggaagaggcattgctgcagacagattatgggctccatcgc
ttactggtgaaagtgagtgatcatggttatcccgagcctctccactccacggtcatggtg
aacctatttgtcaatgacactgtcagtaatgagagttacattgagagtcttttaagaaaa
gaaccagagattaatatagaggagaaagaaccacaaatctcaatagaaccgactcatagg
aaggtagaatctgtgtcttgtatgcccaccttagtagctctgtctgtaataagcttgggt
tccatcacactggtcacagggatgggcatatacatctgtttaaggaaaggggaaaagcat
cccagggaagatgaaaatttggaagtacagattccactgaaaggaaaaattgacttgcat
atgcgagagagaaaaccaatggatatttctaatatttga
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