Pongo pygmaeus (Bornean orangutan): 129012960
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Entry
129012960 CDS
T10128
Symbol
FANCM
Name
(RefSeq) Fanconi anemia group M protein isoform X1
KO
K10896
fanconi anemia group M protein
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
129012960 (FANCM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppyg03400
]
129012960 (FANCM)
DNA repair and recombination proteins [BR:
ppyg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
129012960 (FANCM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCM-MHF_bd
DEAD
Helicase_C
ResIII
ERCC4
Cas3-like_C_2
HHH_2
Motif
Other DBs
NCBI-GeneID:
129012960
NCBI-ProteinID:
XP_054305132
LinkDB
All DBs
Position
15:43742199..43806815
Genome browser
AA seq
2050 aa
AA seq
DB search
MSGRQRTLFQTWGSSISRSSGTPGCSSGTERPQSPGSSKAPLPAAAEAQLESDDDVLLVA
AYEAERQLCLEDGGFCTSAGALWIYPTNCPVRDYQLHISRAALFCNTLVCLPTGLGKTFI
AAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMAEMTGSTQAFTRKEI
WCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYCQVVRELVKYTNHFR
ILALSATPGSDIKAVQQVITNLLIGQIELRSEDSPDILAYSHERKVEKLIVPLGEELAAI
QKTYIQILESFAHSLIQRNVLMRRDIPNLTKYQIILARDQFRKNPSPNIMGIQQGIIEGE
FAICISLYHGYELLQQMGMRSLYFFLCGIMDGTKGMTRSKNELGRNEDFMKLYNHLECMF
AHTRSTSANGISAIQQGDKHKKFVYSHPKLKKLEEVVIEHFKSWNAENTSEKKRDETRVM
IFSSFRDSVQEIAEMLSQHQPIIRVMTFVGHASGKSTKGFTQKEQLEVVKQFRDGGYNTL
VSTCVGEEGLDIGEVDLIICFDSQKSPIRLIQRMGRTGRKRQGRIVVILSEGREERIYNQ
SQSNKRSIYKAISGNRQVLRFYQRSPRMVPDGINPKLHKMFITHGVYEPEKPSRNLQRKS
SIFSYRDGMRQSSLKKDWFLSEEEFKLWNRLYRLRDSDEIKEITLPQVQFSSLQNEENKP
TQESTTGIHQLSLSEWRLWQDHPLPTHQIDHSDRCRHFIGLMQMIEGMRHEEGECSYELE
VESYLQMEDVTSTFIAPRNESNNLPNDTFITHKKSSFIKNINQGSSSLVIESDEECAEIF
KQTHIKPTKIVSLKKKVSKEIKKDQLKKENNHGIIDSLDTDRNSTVENIFQEDLPNDKRT
SDTDEIAATCTINENVIKEPCVLLTECQFTNKSTSSLAGNVLDSGYNSFSDEKSVSSNLF
LPFEEELYIVRTDDQFYNCHSLTKEVLANVERFLSHSPPPLSGLSDLEYEIAKGTALENL
LFLPCAEHLQSDKCTCLMSRSAVNSQQNLELNSLKCINYPSEKSCLYDIPNDNISDEPSL
CDCDVHKHNQNENLVPNNRVQIHRGPAQNLVGENNHDVGNSDLPVLSTDQDESLLLFEDV
NTEFDDVSLSPLNSKSKSLRVSDKTAISEMPLVSQFLISDELLLDNNSELQDQITCDANS
FKSRDDQRGVQEEKVKNHEDIFDCSRDLFSVTFDLGFCSPDSDDEILEHTSDSNRPLDDL
YGRYLEIKEISDANYVWNQALIPRDHSKNFTSGTVIIPSNEDMQNPNYVHLPLSAAKNEE
LLSPGYSQFSLPVQEKVMSTPLSKSNTLNSFSKIRKEILKTPDSNKEKVNLQRFKEALNS
TFDYSEFSLEKSKSSGQIYLHKSCHSVEDGQLLTSNESEDDEIFRRKVKKARGNILNSPE
DQKNSEVDSPLHAVKKRRFPINRSELSSSDESENFSKPCSQLEDFKVCNRNARRGIKVPK
RQSHLKHVARKFLDDEAELSEEDAEYVSSDENDESENEQDSSLLDFLNDETQLSQAINDS
EMRAIYMKSLRSPMMNNKYKMIHKTHKNINIFSQIPEQDETYLEDSFCVDEEESYKGQSS
EEEVCVDFNLITDDCFASRSKKYKTRRAVMLKQMMEQNCAHSKKKLSRIILPDDSSEEEN
NVNDKRESNIAVNPSTVKKNKQQDHCLNSVPSGSSLQSKVHSSPRVNPLAKQSKQTSLNL
KDTISEVSDFKPQNHNEVQSTTPPFTTVDSQKDCRKFPVPQKDGSALEDSSTSVASCSKS
RPHLAGTHTSLRLPQEGKGTCILVGGHEITSGLEVISSLRAIHGLQVEVCPLNGCDYIVS
NRMVVERRSQSEMLNSANKNKFIEQIQHLQSMFERICVIVEKDREKTGDTSRMFRRTKSY
DSLLTTLIGAGIRILFSSCQEETADLLKELSLVEQRKNVGIHVPTVVNSNKSEALRFYLS
IPNISYVTALNMCHQFSSVKRMANSSLQEISMYAQVTHQKAEEIYRYIHYVFDIQMLPND
LNQDRLKSDA
NT seq
6153 nt
NT seq
+upstream
nt +downstream
nt
atgagcggacgacaaagaacgctttttcagacgtggggctcaagtatctcccgatcatct
gggactccgggttgcagctccggaactgagcgacctcagagccctggcagctccaaggcg
cctttgccagcagcagcggaggctcagctggagtcggacgatgatgtgttgcttgtcgcg
gcgtacgaggctgagcggcagttgtgtctagaggatggcgggttctgcacttccgcgggc
gccctgtggatttaccctactaattgcccagtgcgggactaccagctgcacatctcccgg
gctgctctgttttgcaatacgctggtgtgtctgcctaccggactgggaaagacctttatt
gccgccgtggtcatgtacaatttctaccgctggttcccttcaggaaaggtggtcttcatg
gccccaacgaaacccttggtgacacagcagatcgaggcttgctaccaggtgatgggtatc
ccgcagtcccacatggccgaaatgacagggtctacacaagctttcaccaggaaggaaata
tggtgcagtaagagagtgctttttcttacacctcaggtcatggtaaatgacctttctaga
ggagcttgtcccgctgctgaaataaagtgtttagttattgatgaagctcataaagctctc
ggaaactatgcttattgccaggttgtaagagaactagtcaaatatacaaatcactttaga
atcttggctctaagtgccacaccaggtagtgatataaaggctgtgcaacaagttattact
aacctgctaattgggcagatagagcttcgttctgaagattctccagatattttggcatat
tctcatgaaagaaaagttgaaaagcttattgttccgcttggtgaagaacttgcagccatc
caaaagacctatatccagattttggaatcatttgctcattctttgattcagaggaatgtt
ttgatgagaagggatatcccaaatctaacaaaatatcagataattctggcaagagatcaa
tttaggaaaaacccatctccgaatattatgggaatacaacaaggcataatcgagggagag
tttgctatttgtattagtttatatcatggttatgaattattgcagcaaatgggaatgaga
tcattatatttcttcctttgtggaattatggatggaactaaaggaatgacacggtcaaaa
aatgaacttggtcgaaatgaagacttcatgaaactctataatcatctagagtgtatgttt
gcacatacacgtagtacttcagcaaatggtatttctgctatccaacaaggagataaacat
aaaaaatttgtttatagtcatccaaagttaaagaaattagaagaagttgtaattgaacac
ttcaagtcatggaatgctgaaaacacttctgaaaagaaacgtgatgagacccgagttatg
atcttctcttcatttcgagatagtgttcaagaaattgcagaaatgctttcacagcatcag
ccaattattagagtaatgacttttgtcggccatgcctcagggaaaagcacgaagggtttt
acccagaaggagcaactggaggtagtgaaacagtttcgtgatggtggttacaacacgttg
gtttctacctgtgtgggtgaagaaggtttggatataggagaagttgatcttataatatgt
tttgattcccagaagagcccaattcgtcttatacaacgaatgggtagaactggccgtaaa
cgtcaaggcaggatagttgttatcctttctgaaggacgagaggaacgtatttataatcag
agtcagtccaacaaaagaagtatatataaagctatttcaggtaacaggcaggtccttcgt
ttttaccaaagaagtccacgaatggttcctgatggaatcaacccaaaattacacaaaatg
ttcatcacacatggtgtctatgaaccagagaagccttctcggaacttgcagcgaaagtca
tctatcttttcctatagggatggaatgaggcaaagtagcctaaagaaagattggttctta
tcagaagaagaatttaaattatggaacagactttatagattaagagacagtgatgaaatt
aaagagataacattgcctcaagttcagttttcttctttacaaaatgaggaaaacaaacca
actcaagaatcaaccactggaattcatcaactctctctctctgaatggagactgtggcaa
gatcatcctttgcctacacatcaaattgatcactcagatcgatgccgccattttataggc
cttatgcaaatgatagagggaatgagacacgaagagggagaatgcagctatgaattggaa
gttgaatcttatttacaaatggaagatgttacctcaacatttattgctcccaggaatgaa
tctaataatcttcccaatgacacctttatcactcacaagaaatcgtcttttataaagaac
ataaatcaaggcagttcatccttagtgatagaatctgatgaagaatgtgctgaaattttt
aaacaaactcatatcaaacctactaaaattgtttctttaaagaaaaaagtgtctaaagaa
ataaaaaaagatcaacttaaaaaagaaaataatcacggtattatagattctttagatact
gacagaaattctactgttgaaaatatttttcaagaagacctaccaaatgataaaaggaca
tcagatacagatgaaattgctgccacatgtactattaatgaaaatgttattaaagagcca
tgtgtattattaacagagtgtcagtttacaaataaatccactagttcacttgctggaaat
gttttagattctggttataacagtttcagtgatgaaaaatctgtttcatctaacttattt
cttccattcgaagaagagctttatattgttagaacagatgaccaattttataattgtcac
tcattgacaaaagaggtactagctaatgtagagagatttttatctcattctcctccgcct
ctcagtggactctcagacttggaatatgaaattgctaagggtactgcacttgagaatttg
cttttcttaccctgtgcagagcatttacaaagtgataaatgcacctgtttgatgtcacgt
tcagctgtgaattctcaacagaatttagaattgaattcacttaaatgtataaattatcca
tctgaaaaaagttgcctttatgatatacctaatgataatatttctgatgagccaagtctc
tgtgactgtgatgtacataaacataatcaaaatgaaaatttagtacctaacaatcgtgtt
caaatacacagaggccctgcacagaatttagttggagagaacaatcatgatgttggtaac
agtgacctcccagtattgtccactgatcaagatgaaagtttactattatttgaagatgtt
aatacagagttcgacgatgtgagtctttcacccttgaacagtaaaagcaaatctttacgt
gtgtcagacaaaactgctattagtgaaatgcctctggtctctcagttcttaatttctgat
gaacttttgttggacaataattctgaactccaagatcaaatcacctgtgatgctaatagt
tttaaatctcgtgatgatcagagaggtgtacaggaagaaaaagtgaagaatcatgaggat
atttttgattgctctagggatttattttctgttacctttgatttaggattctgtagtcca
gattctgatgatgaaatattggaacatacatcagatagcaatagacctctagatgatcta
tatggaaggtatttggaaattaaggagataagtgatgcaaattatgtttggaatcaagca
ctaataccaagagatcatagtaaaaattttactagtggaaccgttattatcccatcaaat
gaagatatgcagaatccaaattatgtacatttgccactgagtgcagcaaaaaatgaagaa
ttgttatctcctggttattctcagttttctttaccagtgcaagaaaaagttatgagtaca
ccactctctaaatcaaacacattgaactcattttctaagataagaaaggaaatacttaag
acaccagattctaataaggaaaaagtaaacctacaaagattcaaagaagcattgaattca
acttttgactattcagaattttctctagaaaagtctaaaagcagtggtcaaatatatctg
cataaatcctgtcattctgttgaagatggacaattattaacaagtaatgaaagtgaagat
gatgagattttccgaagaaaagttaaaaaagcaagaggaaatattttaaactctcctgag
gatcagaaaaatagtgaagttgattctccacttcatgctgtcaaaaagcgcagatttcct
ataaacagatcagaattatcatctagtgatgagagtgagaatttttccaaaccatgttca
caattagaagacttcaaggtttgtaacaggaatgccagaagaggcatcaaagtcccaaag
agacagagtcacttaaagcatgtagctaggaagtttttagatgatgaagcagaactttct
gaagaggatgcagaatatgtttcatcagatgaaaatgatgagtcagaaaatgaacaagat
tcctcattacttgactttttaaatgatgaaactcaactttcacaggctataaatgattct
gaaatgagagctatttacatgaaatctttgcgtagtccaatgatgaacaataagtacaaa
atgattcataagacacataaaaacataaacattttctcacagattcctgaacaagatgaa
acctatttagaggatagtttttgtgttgatgaagaggagtcttacaaaggccagtcaagt
gaagaagaagtttgtgttgattttaacttaataactgatgattgctttgcaagtaggagt
aaaaagtataaaactcgacgtgcagtaatgctaaaacaaatgatggaacaaaattgtgca
cattcaaaaaagaaattatccagaattattttaccagatgattcaagtgaggaggagaac
aatgtaaatgataaaagagaatctaatattgcggttaacccaagcactgttaagaagaac
aaacaacaggaccattgtttaaattcagtgccttctggatcttctctgcagtccaaggtg
cattctagtccaagagttaatccattagcaaagcagagcaaacagacatcactgaattta
aaggatacaatttccgaagtctcagacttcaaacctcagaatcataatgaagtccagtct
accacaccacccttcactactgttgattcacagaaagactgtagaaaatttccagttcca
cagaaggatggtagtgctttggaggattctagcacttcagtggcatcctgttccaagtca
agaccacatttagctgggacacatacttctcttagacttccacaggaaggaaaaggaacc
tgtattcttgtaggtggtcatgaaatcacttctggattagaagtaatttcttccctaaga
gcaattcatgggttgcaagtagaagtttgtcctcttaatggctgtgattacatcgtgagt
aaccgcatggtggtggaaaggaggtctcaatctgagatgttaaatagtgccaataagaac
aagttcattgagcagatccagcacctgcagagtatgtttgaaagaatatgtgtgattgtg
gaaaaggacagagaaaaaacaggagacacatcaaggatgtttaggagaacaaagagctat
gacagcctgctgactaccttaattggcgctggaatccgaattcttttcagttcctgccaa
gaagaaactgcagatttgctaaaggaactgtctttagtggaacaaagaaagaatgttggt
attcatgttccaacagtggtgaatagtaataaaagtgaggcactccggttttatttaagt
attcccaatataagttatgtaactgcattaaatatgtgtcaccagttttcatctgtgaaa
aggatggctaacagctcacttcaagaaatctccatgtatgcacaagtaactcatcagaag
gctgaggagatctatagatatattcactatgtatttgacatacaaatgttaccaaatgat
cttaaccaagatagactgaaatctgatgcataa
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integrated database retrieval system
