Pongo pygmaeus (Bornean orangutan): 129013945
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Entry
129013945 CDS
T10128
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
129013945 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyg03019
]
129013945 (MYO5C)
04131 Membrane trafficking [BR:
ppyg04131
]
129013945 (MYO5C)
03029 Mitochondrial biogenesis [BR:
ppyg03029
]
129013945 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppyg04812
]
129013945 (MYO5C)
Messenger RNA biogenesis [BR:
ppyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
129013945 (MYO5C)
mRNA cycle factors
P-body specific factors
129013945 (MYO5C)
Membrane trafficking [BR:
ppyg04131
]
Others
Actin-binding proteins
Myosins
129013945 (MYO5C)
Mitochondrial biogenesis [BR:
ppyg03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
129013945 (MYO5C)
Cytoskeleton proteins [BR:
ppyg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
129013945 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Csm1_N
WIV_dom_3
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
129013945
NCBI-ProteinID:
XP_054306690
LinkDB
All DBs
Position
16:complement(57444973..57550370)
Genome browser
AA seq
1742 aa
AA seq
DB search
MAVAELYTQYNRVWIPDPEEVWKSAEIAKDYRVGDKVLRLLLEDGTELDYSVNPESLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNSRNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSGSNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDEQNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLGSAEEFNYTRMGGNTVIEGVNDR
AEMVETQKTFTLLGFKEDFQMDVFKILAAILHLGNVQITTVGNERSSVSEDDSHLKVFCE
LLGLESGRVAQWLCNRKIVTSSETVVKPMTRPQAVNARDALAKKIYAHLFDFIVERINQA
LQFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNRNPLFEKPR
MSNTSFVIQHFADKVEYKCEGFLEKNRDTVYDMLVEILRASKFHLCANFFQENPAPPSPF
GSMITVKSAKQVIKPNSKHFRTTVGSKFRSSLYLLMETLNATTPHYVRCIKPNDEKLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTHIEFYSRYGILMTKQELSFSDKKEVCKAV
LHRLIQDSNQYQFGKTKIFFRAGQVAYLEKLRLDKLRQSCVMIQKHMRGWLQRKKFLRER
RAALIIQQYFRGQRTVRKAITAVALKEAWAAIIIQKHCRGYLVRNLYQLIRVATITMQAY
TRGFLARRRYRKMLEEHKAVILQKYARAWLARRRFQSIRRFVLNIQLTYRVQRLQKKLED
QNKENHGLVEKLTSLAALRAGDVEKIQKLEAELERAATHRRNYEEKGKRYRDAVEEKLAK
LQKRNSELETQKEQIQLKLQEKTEELKEKMDNLTKQLFDDVQKEERQRMLLEKSFELKTQ
DYEKQIQSLKEEIKALKDEKMQLQHLVEEEQVTSDGLKAEVARLSKQVKTISEFEKEIEL
LQAQKIDVEKHVQSQKREMREKMSEITKQLLESYDIEDVRSRLSVEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFREENDINESIRHE
VTRLTSENMMIPDFKQQISELEKQKQDLEIRLSEQTEKMKGKLEELSNQLHRSQEEEGTQ
RKAMEAQNEIHTKEKEKLIDKIQEMQEASDHLKKQFETESEVKSNFRQEASRLTLENRDL
EEELDMKDRVIKKLQDQVKTLSKTIGNANDVHSSSGPKEYLGMLQYKREDEAKLIQNLIL
DLKPRGVVVNMIPGLPAHILFMCVRYADSLNDANMLKSLMNSTINGIKQVVKEHLEDFEM
LSFWLSNTCHFLNCLKQYSGEEEFMKHNSPQQNKNCLNNFDLSEYRQILSDVAIRIYHQF
IIIMERNIQPIIVPGMLEYESLQGISGLKPTGFRKRSSSIDDSDGYTMTSLLQQLSYFYT
TMCQNGLDPELVRQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDK
NLQNSLAKETLEPLSQAAWLLQVKKTTESDAKEIYERCTSLSAVQIIKILNSYTPIDDFE
KRVTPSFVRKVQALLNSREDSSQLMLDTKYLFQVTFPFTPSPHALEMIQIPSSFKLGFLN
RL
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgagctgtacacgcagtacaacagggtctggattcccgatcctgaagaa
gtttggaagtctgctgaaatagccaaggactacagagttggtgacaaggtcctgcgactc
ctgctggaggatggaacggagctggattattctgtcaatccagaatctctgcctccactt
cggaatcctgacatcctcgtgggcgagaatgacctcacggctctcagctatcttcatgaa
cccgcggtgctccacaacctcagaatccgctttgcagaatccaaactcatttacacctac
agtggaatcattttggtggccatgaatccttacaagcagttgccaatatacggagatgcc
atcatccacgcctacagcgggcagaacatgggtgatatggacccacacatatttgccgtg
gcagaagaggcatacaagcagatggccagaaacagcagaaatcagtccataattgtaagt
ggggagtcaggtgctggaaagacagtgtcggctcgctatgccatgaggtactttgccact
gtcagcaaatcgggcagcaacgctcacgtggaagacaaggtcctggcatccaatcccatc
accgaggctgttggaaatgccaagaccacccgaaatgacaatagtagtcggtttgggaaa
tacacagaaatcagttttgatgaacaaaatcaaattataggagccaacatgagaacttac
ctcctggagaaatccagagttgtctttcaatcggaaaatgaacgaaattaccacattttc
tatcagctttgtgcatctgcacagcagtcggaatttaaacatcttaaattggggagtgcc
gaagaatttaattatacgagaatgggaggcaatactgtcattgagggtgtgaatgatcga
gctgaaatggtagagactcaaaagaccttcacgcttctgggtttcaaggaggattttcag
atggacgtttttaaaatcctggcagccatcctacatctgggcaatgtgcagatcaccacg
gtgggcaacgagaggtcctcagttagtgaggatgacagtcacctgaaggtgttctgtgag
ctcctgggcctggagagtggcagagttgctcagtggctgtgcaatcgcaaaatcgtcaca
agctctgagacggtggtaaaacccatgaccaggcctcaggctgtcaacgccagggatgca
ctggccaaaaagatctatgctcacctgttcgacttcattgtggagagaattaaccaagcg
ttgcagttttcaggcaagcagcacacttttattggtgttttggacatttatggttttgaa
acctttgatgtgaacagctttgaacaattttgcatcaattacgctaatgaaaaactgcaa
cagcagtttaacatgcatgtcttcaaactggaacaagaagaatacatgaaggaagatata
ccttggacgctgatagatttttatgacaatcaaccagttattgacctgattgaagcaaaa
atgggaattctggagttactggatgaagaatgtttgttaccacatggaactgatgaaaac
tggcttcaaaagctgtataataattttgtcaacaggaaccctttgtttgaaaagcctaga
atgtcaaacacatcctttgtcatccagcactttgctgataaggtagagtataaatgtgaa
ggtttcctggagaaaaacagagacaccgtctatgacatgctggttgaaatcctgagagca
agcaagtttcatctctgcgccaacttttttcaagaaaatccagctcctccttctcctttt
ggttcaatgattacagttaaatctgcaaagcaagtcatcaagccaaacagcaagcatttc
cggaccacagttgggagcaagttccgcagctctctgtacttgctcatggagacgctcaat
gcgacgacgccccactacgttcgatgcatcaagccaaatgatgagaagttaccctttgaa
tttgactccaaaagaattgttcagcagctgcgagcctgtggcgttttagaaacgattcgc
attagtgcacagagctacccttccaggtggacacacatcgagttctacagtcgctacggc
attctcatgaccaagcaagagctttccttcagcgataaaaaggaggtgtgcaaggcggtt
ttacacagactcatccaggattctaatcagtaccagtttggtaaaaccaaaattttcttc
agagcaggacaagtggcttatttagagaaacttcgattggataaactgaggcagagttgt
gttatgatacaaaagcacatgcgtggctggctccagaggaaaaaattcctccgagagaga
cgagccgccctgataatccagcagtacttccggggtcagcgaactgtgaggaaagctatt
actgcagtggccttaaaagaagcctgggcagccataatcattcagaagcactgccgtggg
tatcttgttcgcaacctgtatcagctgattcgtgtggccaccatcaccatgcaggcgtac
acccgaggattcctggcaaggaggaggtatcgaaagatgctggaggaacacaaggctgta
atcctgcagaaatacgcacgggcgtggctggccagacgcagattccagagtatccgacga
ttcgtgcttaatattcagcttacttacagggtccagcgtttgcagaaaaagctggaagat
caaaacaaagaaaaccatgggctggtggagaagctgaccagcctggctgctcttcgagct
ggggatgtggaaaagattcagaagctggaagcagaactagaaagagcagccactcacagg
cgaaattacgaggagaaggggaagagatacagggatgctgtggaagagaaattggcaaag
cttcagaagcgtaattcagaactggaaacacagaaagaacaaatacagctgaagcttcaa
gagaagactgaagagttgaaagaaaaaatggacaacctcaccaagcagctctttgatgat
gtacaaaaggaagaacgacaaagaatgcttcttgaaaaaagttttgaactgaaaacacaa
gactatgagaagcagattcagtctttgaaagaagaaattaaagctctcaaggatgagaag
atgcaactccaacacctggtggaggaggagcaggtcacttctgatggcttgaaggccgaa
gtggcccgcctgagcaagcaggtcaagacaatctctgagttcgaaaaagagatagaacta
cttcaggcacagaagatagatgtggagaaacatgtgcagtcacaaaaacgggaaatgaga
gaaaagatgtcagagatcaccaaacaacttctcgaaagctatgacattgaagatgtaaga
agcaggctctctgtggaagatctggaacatttaaatgaggatggagaactttggtttgct
tatgaaggactaaagaaagcaacacgtgttttggagagccatttccagtctcagaaggat
tgctatgaaaaggagattgaagctttgaacttcaaagtggtgcatctaagtcaagaaatc
aaccacctgcagaagttattcagagaagaaaatgacatcaatgaaagcatccgtcatgaa
gttaccaggctaacatcagagaacatgatgatcccagactttaaacagcaaatttcagaa
ttggagaagcagaagcaagatcttgaaatccgcctgagtgaacaaactgagaaaatgaaa
ggaaaactagaagaattgtctaatcagttacatcgcagtcaagaggaagaaggaacacaa
agaaaggccatggaagcccaaaatgaaatacataccaaagagaaggagaagctgattgat
aagattcaagaaatgcaggaggccagtgaccacttgaagaaacaatttgaaactgaaagt
gaagtcaagagtaacttccggcaggaagcatcccggctcactttggaaaacagggatctt
gaagaagaactagacatgaaggacagagtgattaaaaagctacaagatcaagtcaagaca
ctaagcaagacaattggcaacgccaatgatgtgcactcgtcctcaggacccaaggagtac
cttggaatgctgcaatacaagagagaagacgaggccaagctcattcagaacctcattctt
gacttgaagccccgtggtgtggtggtgaacatgatccctgggctgccggctcatatcctg
ttcatgtgtgtgcgctatgcagactctctgaatgatgccaacatgctgaagtccctcatg
aacagcaccattaatggcatcaagcaggtggttaaggaacatttagaagactttgaaatg
ctgtccttttggctttccaacacttgtcattttctcaattgcctgaagcagtacagtgga
gaagaggaattcatgaagcataatagtccacaacagaataagaactgcttgaacaatttt
gacctttcagaatacagacagattctcagtgatgtggctatacgaatatatcatcaattt
attatcataatggaaaggaatatccaaccgataatagttccgggcatgctggagtatgag
agcctgcagggcatttccggcctgaagcccacaggcttccggaagcgctcctccagcata
gacgactcggacggctacaccatgacttccctcctgcagcagctgagctacttttacacc
accatgtgccagaacggcctggaccccgagctcgtgaggcaggcggtgaagcagctcttc
ttcttgatcggggcggtcacgctgaatagcctcttcctgcgcaaggacatgtgctcctgc
agaaaagggatgcagatcaggtgcaatatcagctacttagaagaatggcttaaagataag
aacttgcagaacagcttagcaaaggaaactttggagcccctctctcaggcagcctggttg
cttcaggtcaagaagaccacagagagtgatgccaaggagatctacgaacgctgcacctca
ctgtctgctgtgcagatcataaagatccttaattcatatacacctatagatgactttgag
aagagagtgactccatcctttgttcgcaaagtacaggctctcctaaatagccgggaggat
tcatcacagctgatgttggataccaaatatctctttcaagtcacatttccttttaccccc
tctccacatgctctggaaatgattcagatccccagcagtttcaagctaggctttctgaat
aggttatag
DBGET
integrated database retrieval system
