Pongo pygmaeus (Bornean orangutan): 129014538 Help Entry 129014538         CDS       T10128                                  Symbol SPG11 Name (RefSeq) spatacsin isoform X1   KO K19026   spatacsin Organism ppyg  Pongo pygmaeus (Bornean orangutan) Pathway ppyg05014   Amyotrophic lateral sclerosis ppyg05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:ppyg00001]  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     129014538 (SPG11)    05022 Pathways of neurodegeneration - multiple diseases     129014538 (SPG11)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ppyg03400]     129014538 (SPG11) DNA repair and recombination proteins [BR:ppyg03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      129014538 (SPG11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  129014538 NCBI-ProteinID:  XP_054307974 LinkDB All DBs Position 16:complement(49770407..49872332) Genome browser AA seq 2443 aa AA seqDB search MAAEEGVASAASAGGSWGVAAMGRVLPMLLVPVPAEVMGQLGSRAQLHTQQEALGSLTAA GSLQVLSLEPGSRGGGRCCLEGPFWHFIWEDSRDSSTPTEKPKLLAVGENYELLIYEFNL KDGRCDATILYSCSGEALQKLIEDQDISISLLSLRILSFHNNTSLLFINKCVILHIIFPE RDAAIRVLNCFTLPLPAQAVDMIIDTQLCRGILFVLSSLGWIYIFDVVDGTYVAHVDLAL HKEDMCNEQQQEPAKISSFTSLKVSQDLDVVVIVSSSNSAVALNLNLYFRQHPGHLLCER ILEDLPIQGPKGIDEDDPVNSAYNMKLTKFSFQIDRSWKAQLSSLNETIKKSKLEVSCCA PWFQDILHLESPKSGNHSTSVQSWAFIPQDIMHGQYNVLQKDHAKTSDPGRSWKIMHISE QEEPIELKCVSVTGFTALFTWEVERMGYTITLWDLETQGMQCFSLGTKCIPVDSSGDQQL CFVLTENGLSLILFGLTQEEFLNRLMIHGSASTVDTLCHLNGWGRCSIPIHALEAGIENR QLDTVNFFLKSKENLFNPSSKSSVSNQFDHLSSHLYLRNVEELIPALDLLCSAIRESYSE PQSKHFSEQLLNLTLSFLNNQIKELFIHTEELDEHLQKGVNILTSYINELRTFMIKFPWK LTDAIDEYDIHENVPKVKESSIWKKLSFEEVIASAILNNKIPEAQTFFRIDSHSAQKLEE LIGIGLNLVFDNLKKNNIKEASELLKNMGFDVKGQLLKICFYTTNKNIRDFLVEILKEKN YFSEKEKRTIDFVHQVEKLYLGHFQENMQIQSFPRYWIKEQDFFKHKSVLDSFLKYDCKD EFNKQDHRIVLNWALWWDQLTQESILLPRISPEEYKSYSPEALWRYLTARHDWLNIILWI GEFQTQHSYASLQQNKWPLLTVDVINQNTSCNNYMRNEILDKLARNGVFLASELEDFECF LLRLSRIGGVIQDTLPVQNYKTKEGWDFHSHFILYCLEHSLQHLLYVYLDCYKLSPENCP FLEKKELHEAHPWFEFLVQCRQVASDLTDPKLIFQASLANAQILIPTNQASVSSMLLEGH TLLALATTMYSPGGVSQVVQNEENENCLKKVDPQLLKMALTPYPKLKTALFPQCTPPSVL PSDITLYHLTQSLSPFDPSRLFGWQSANTLAIGDAWSHLPHFSSPDLVNKYAIVERLNFA YYLHNGRPSFAFGTFLVQELIKSKTPKQLIQQVGNEAYVIGLSSFHIPSIGAACVCFLEL LGLDSLKLRVDMKVANIILSYKCRNEDAQYSFIRESLAEKLSKLADGEKTTTEELLVLLE EGTWNSIQQQEIKRLSSESSSQWALVVQFCRLHNMKLSISYLRECAKANDWLQFIIHSQL HNYHPAEVKSLIQYFSPVVQDHLRLAFENLPSVPTSKMDSDQVCNKSPQELQGSKEEMTD LFEILLQCSEEPDSWHWLLVEAVKQQAPILSVLASCLQGASAISCLCVWIITSVEDSVAT EAMGHIQDSTEDHTWNLEDLSVIWRTLLTRQKSKTLIRGFHLFFKDSPLLLVMEMYELCM FFRNYKEAEAKLLEFQKSLETLNTAATKVHPVIPAMWLEDQVCFLLKLMLQQCKTQYELG KLLQLFVEREHLFSDGPDVKKLCVLCQILKDTSIAINHTIITSYSIENFQHECRSILEKL QTDGQFALARRVAELAELPVDDLVIKEITQEMQTLKHIEQWSLKQARIDFWKKCHENFKK NSISSKAASSFFSTQAHVACEHPTGWSSIEERHLLLTLSGHWLAQEDMVPLDKLEELEKQ IWLCRITQHTLGRNQEETEPKFSRQISTSGELSFDSLASEFSFSKLAALNTSKYLELNSL PSKETCENRLDWKEQESLNFLIGHLLDDGCVHEASRVCRYFHFYNRDVALVLHCRALASG EASMEDLHPEIHALLQSAELLEEEAPDIPLRRVHSTSSLDSQKFVTVPSSDEVVTNLEVL TSKCLHGKNYCRQVLCLYDLAKELGCSYTDVAAQDGEAMLREILASQQPDRCKRAQAFIS TQGLKPDTVAELVAEEVTRELLTSSQGTGHKQMFNPTEESQTFLQLTTLCQDRTLVGMKL LDKISSVPHGELSCTTELLILAHHCFTLTCHMEGIIRVLQAAQMLTDNHLAPSEEYGLVV RLLTGIGRYNEMTYIFDLLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNM IALCFSMCREIGENHEAAARIQLKLIESQPWEDSLKDGHQLKQLLLKALTLMLDAAESYA KDSCVRQAQHCQRLTKLITLQIHFLNTGQNIMLINLGRHKLMDCILALPRFYQASIVAEA YDFVPDWAEILYQQVILKGDFNYLEEFKQQRLLKSSIFEEISKKYKQHQPTDMAMENLKK LLTYCEDVYLYYKLAYEHKFYEIVNVLLKDPQTGCCLKDMLAG NT seq 7332 nt NT seq  +upstreamnt  +downstreamnt atggctgcagaggagggggtcgcgagtgccgcttccgccggcggtagctggggcgttgcg gccatggggcgggttctaccgatgctgttggtgccggtccccgccgaggtgatggggcag ctcggctcccgggcgcagctgcacacacagcaggaggctctggggagcctgacggctgcg ggcagcctccaagtgctttctctggagcctggcagccggggcgggggtcgctgctgcctg gagggccccttctggcactttatatgggaggattctcgtgacagcagcacaccaactgaa aagcccaaactgctcgctgttggtgaaaattatgaactgcttatctatgaatttaatttg aaagatggaagatgtgatgcaaccattttgtatagctgtagtggggaggcattgcaaaag ctcattgaagatcaagatatcagtatttccttattgtctttgagaatcctgtcatttcac aataacacatcattattgttcatcaacaaatgtgtcatcctacatattatatttcctgaa agagatgctgcaattagagtactcaactgtttcacactacccttgcctgcacaggcagtg gacatgattattgacacgcagctctgcagaggaattctttttgttttgagtagtttaggc tggatctacatttttgatgttgtggatggtacatatgtagctcatgtggatttagcactt cacaaagaagacatgtgtaatgagcagcaacaggagccagccaagatttcttcatttact tcactgaaagtttctcaagaccttgatgttgtagtgattgtcagctcctccaactccgca gttgctcttaacttaaatttgtatttcaggcaacacccaggacacctactgtgtgaaaga atactagaagaccttcctattcaaggacctaagggcatagacgaagatgatcctgttaac tctgcctacaacatgaaactgaccaagttttccttccaaattgataggtcttggaaagcc cagctatcatcattgaatgaaacaataaagaaatccaaactggaggtttcctgttgtgct ccatggttccaggatattttgcatttggagtcacctaaatctggtaaccacagtacaagt gtgcagagctgggctttcattccacaggacataatgcacgggcaatataatgttctacag aaagatcatgccaagaccagtgatccaggaagatcatggaaaataatgcacatcagcgaa caagaggaacccatagagcttaaatgtgtgtctgtgacaggattcactgcactgtttact tgggaagtggaaaggatgggctataccattaccctctgggatttggagacccagggcatg cagtgtttttcccttggcacaaagtgtattcctgtagacagtagtggagaccagcaactg tgctttgttttgacagagaatggactctctctgattttgtttggtttgactcaagaagag tttttaaacaggctcatgatccatggaagtgccagcactgtggacactctttgtcatctc aatggctgggggaggtgctcaattcccatacatgcactagaggccgggatagaaaatcgt cagctggacacagtaaatttctttttgaagagcaaggaaaatctttttaatccatcctca aagtcttctgtatctaatcagtttgatcacttgtcatcccatttatatttaagaaatgtg gaagagctgataccagcattggatttactttgctcagcaattagagaaagttattctgaa ccccaaagcaaacacttttcagaacaattgcttaatcttacactgtctttccttaacaac caaataaaggagctttttattcacactgaagaactagatgaacatctgcaaaaaggagtg aacattttgactagctacattaatgaacttcgaaccttcatgataaagtttccttggaag ctaacagatgctatagatgaatatgatatacatgaaaatgtccccaaagtaaaggagagc agtatatggaagaaactcagctttgaggaagttattgccagtgccattttaaacaacaaa ataccagaggcacagactttcttcaggattgatagtcattctgctcaaaaacttgaggag ctgattggcataggcctaaatttggtctttgacaatttgaaaaagaacaatataaaggaa gcctctgaacttttgaagaatatggggtttgatgtaaaaggccaattgctcaagatatgc ttctatacaactaataaaaatatacgtgactttttggttgaaattttaaaagaaaaaaat tatttttctgaaaaagagaaaagaactatagacttcgtgcatcaagttgagaagctttat ttgggacatttccaagaaaatatgcaaatccagtcatttcccaggtattggataaaggaa caagattttttcaagcacaagtctgttttggactcattcctgaaatatgattgtaaagat gaatttaacaaacaggaccatagaattgtgttaaattgggctctgtggtgggatcaacta acacaagaatccatccttctccccaggataagtccagaagaatacaaatcatattcccct gaagccctctggagatacctcacagctcgccatgattggttaaacattatcttatggatt ggagaatttcaaacccagcatagttatgcttcacttcagcagaacaaatggccccttctg actgttgatgttattaaccagaatacttcctgtaacaactacatgaggaatgaaatttta gataagctggccaggaatggggtttttctggcatctgaactggaagactttgaatgcttc ctcctaagactgagccgtattggaggtgtaatacaggataccctccctgttcaaaactac aagaccaaagaaggttgggatttccattctcatttcattctctattgtttggagcacagt ctgcagcatcttctttatgtctaccttgactgttacaaacttagtcctgaaaattgtccc tttttggaaaaaaaagagttacatgaagcacacccttggtttgaatttttagttcagtgt cgacaagttgccagtgatttaacagatcccaaactgatcttccaggctagccttgcaaat gctcagattttgattcccaccaatcaggccagtgtaagcagtatgctattggaaggacat accctcctggcccttgctactacaatgtattctcctgggggtgtcagtcaggttgttcag aatgaagaaaatgaaaactgtttgaagaaggtggatccccagctgttgaagatggcatta actccttaccccaagctaaaaactgctctcttcccacagtgcactcctcctagtgtcctg ccatctgatattacactctaccaccttactcagtcattatcaccctttgatcctagcaga ctgtttggctggcagtctgctaacacactagctataggagatgcatggagtcatctccca catttctctagccctgacctggttaataaatatgctatagtggaacgtctgaattttgct tattatttacataatggacggccatcatttgcatttggtacttttctggtccaggaatta atcaagagcaaaactcccaagcagctgatccagcaagtaggcaatgaagcctatgttata gggctgtcctccttccacataccttcaataggagctgcatgtgtttgtttcttagaattg cttggccttgacagcctcaagctcagagttgatatgaaagtggccaatataattttgagc tacaagtgcagaaatgaagatgctcagtacagctttatcagagagtctctagccgaaaaa ctatctaaactagctgatggtgaaaagaccaccacagaagaattgcttgttctcttagaa gaaggtacatggaacagcattcagcaacaggaaataaagaggttatccagtgaatctagc agccaatgggcattagtggtacagttctgcaggctacacaatatgaaactaagcatatct taccttagagaatgtgccaaagcaaatgattggctgcagttcattattcacagccagctc cacaactaccacccagcagaggtgaaatcccttatccagtacttcagcccagtcgttcaa gaccacttaaggctggcttttgagaacttgccctcagtgcctacctccaaaatggacagc gatcaagtctgcaataagtccccccaggaacttcaaggaagcaaagaagagatgaccgat ttatttgaaattctgctccaatgctcagaggagccagactcctggcactggcttctggtt gaagcagtgaaacaacaggcccctatcctcagtgttctggcctcatgtctccagggtgcc agtgccatttcttgtctctgtgtttggatcatcacttctgtggaggacagtgttgcaact gaagcaatgggacacattcaggactcaacagaggaccatacctggaaccttgaggatctt tcagtcatctggagaacattattaacaagacagaagagcaaaactctcatcagaggtttc caccttttctttaaggattccccgttactactggtgatggagatgtatgaactgtgtatg ttcttcaggaattataaagaagctgaagctaaacttctggagtttcagaagagccttgaa acgcttaacacagcagccacaaaggtccaccctgtcatccctgctatgtggctggaggat caggtgtgtttccttttgaagcttatgctacagcagtgtaagacccagtatgagctgggg aagcttttacagctctttgttgaaagagagcatctcttctctgatggtccagatgttaaa aagctttgcgtcctttgccagattttgaaggatacatccatagccattaatcatacaatt attaccagctacagcattgagaattttcagcatgaatgtagatctattttggaaaaactg cagacagatggacaattcgctttggccaggagggtagcagaattagctgagttacctgtg gacgacttggttattaaagagataacacaggaaatgcagaccctaaaacacattgaacag tggtcactaaaacaagcaagaattgacttctggaaaaaatgccatgagaattttaagaaa aattcaatttcaagcaaagcagcgtcttcctttttctcaacccaggcccatgtggcatgt gagcacccaactggatggagcagcattgaggagcgccatctgctgctcaccttgtcaggg cactggcttgcccaggaggacatggtgcccttggacaagctggaggagctggaaaagcag atctggctctgccgcatcacccagcacactcttggaagaaatcaggaggaaacagagccc aaattttctcgacagatctcaactagtggtgaactttcctttgatagtttagccagtgag ttttccttctccaagttggctgctctgaacacatcaaaatacttagaacttaacagcctt ccatccaaagagacatgtgagaatagactggattggaaagagcaggagtcactaaacttt ttgattgggcacctactggatgatggctgtgtgcacgaagcaagtagagtatgccggtat tttcatttttataatcgagatgtcgccttggtattgcactgcagagcactggcctcaggg gaagctagtatggaggatctgcacccagagatccatgctctcctacaaagtgctgagctg cttgaggaagaagcgcccgacattcccctaaggagagtccacagcacttcaagtctggat agtcagaagtttgtgacagtgccctccagtgatgaagtggtaactaacctggaagtgctg acaagcaaatgcctccatgggaagaactactgtcgacaggtcctctgtctgtatgatctt gccaaggagttgggctgttcctacacagatgttgctgctcaggatggtgaagccatgctc cgggaaatcttggcctctcagcagcctgaccgatgcaaacgagcccaggccttcatcagc acgcagggccttaagccagatactgtggctgaactcgtggcagaagaggtgacacgggag ctgcttacttcatcacagggaacaggacataagcagatgttcaacccaacagaggaaagc cagacatttcttcagctgaccactctgtgtcaagaccgcacattggtaggcatgaagttg ttggataagatttcctccgttccccatggggaattgtcttgcaccacagagctcctgatc ctggcccatcattgcttcaccctgacgtgccacatggagggcatcatccgagtcctacag gccgcccagatgctcacagataaccacctggcccccagtgaggagtatgggctggtggta cggctcctcactggcattggaaggtacaacgagatgacatacatatttgatttgctgcat aaaaagcactactttgaagtgctaatgaggaagaagttggatccgagtggtaccctgaaa acagccctgctggactacatcaaacgctgccgtcctggagacagtgagaagcacaatatg attgccctgtgcttcagcatgtgccgggagattggcgagaaccacgaggcagctgcccgc atccaactgaaattgattgagtctcagccctgggaggacagcctcaaggatgggcaccag ctgaagcaactgctgctgaaggccctgactctgatgttggatgcagcagagagttacgcc aaggactcctgtgtgcgacaggcccagcactgtcagcggctcaccaagttgataactctg cagattcactttctgaatactggccagaacataatgctcatcaacttgggtcgccacaag ctgatggactgtattctggccctacctcggttctaccaggcgtctattgtggctgaggcc tatgattttgttccagattgggctgaaattttataccagcaagtgattcttaaaggagac tttaattacttggaagaatttaagcagcaaaggttattaaagtccagtatatttgaagag atttccaaaaaatataaacaacatcagcctactgacatggccatggaaaacctgaagaaa ttactcacatattgtgaagatgtttacctgtattacaagttggcatacgaacacaagttt tatgaaattgtaaatgtgcttctgaaggaccctcagacaggttgctgtctaaaggacatg ctagcaggttag

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