Pongo pygmaeus (Bornean orangutan): 129014598
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Entry
129014598 CDS
T10128
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X2
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04140
Autophagy - animal
ppyg04148
Efferocytosis
ppyg05132
Salmonella infection
Brite
Membrane trafficking [BR:
ppyg04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
129014598 (VPS39)
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GFIT
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NCBI-GeneID:
129014598
NCBI-ProteinID:
XP_054308046
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Position
16:complement(47387459..47437096)
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AA seq
875 aa
AA seq
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MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVGCNRFEVTLEKSNK
NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHTETGE
EVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVD
GKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAME
HQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPM
ATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQKRFDESMQVFAK
LGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYLTQKRSQLVKKL
NDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE
SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENL
HLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLIENFKGLAIPYLEHIIHVW
EETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGEEEGELGEYRQKLLMFLEIS
SCYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTRMAEEYCHKHYDQNK
DGNKDVYLSLLRMYLSPPSIHCLGPIKLELLEPKANLQAALQVLELHHSKLDTTKALNLL
PANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKV
CMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgctttcgagccagtgccgatcctagaaaagctgcctctgcaaatcgactgt
ctggctgcctgggaggaatggcttcttgtgggaaccaaacaaggacatcttcttctctat
aggattcggaaggacgttggttgcaacagatttgaagtgacactggagaaatccaataag
aacttctccaaaaagattcagcagatccatgtggtttcccagtttaagattctggtcagc
ttgttagaaaataacatttatgtccatgacctattgacatttcaacaaatcactacggtt
tcaaaggcaaagggagcatcactgtttacttgtgacctccagcacacagagaccggtgag
gaggtgttacggatgtgtgtggcagtaaaaaagaagctgcagctctatttctggaaggac
agggaatttcatgaattgcagggggactttagtgtgccagatgtgcccaagtccatggcg
tggtgtgaaaattctatctgtgtgggtttcaagagagactactacctaataagggtggat
ggaaaggggtccatcaaagagctctttccaacaggaaaacagctggagcccttagttgca
cctctggcagatggaaaagtggctgtgggccaggatgatctcaccgtggtactcaatgag
gaagggatctgcacacagaaatgtgccctgaactggacggacataccagtggccatggag
caccagcctccctacatcattgcagtgttgcctcgatatgttgagatccgaacatttgaa
ccgaggcttttggtccaaagcattgaattgcaaaggccccgtttcattacctcaggagga
tcaaacattatctatgtggccagcaatcattttgtttggagactcatccctgtccccatg
gcaacccaaatccaacaacttctccaggacaagcagtttgaattggctctgcagctcgca
gaaatgaaagatgattccgacagtgaaaagcagcaacaaattcatcacatcaagaacttg
tatgccttcaacctcttctgccagaagcgttttgatgagtccatgcaggtctttgctaaa
cttggcacagatcccacccatgtgatgggcctgtaccctgacctgctgcccacagactac
agaaagcagctgcagtatcccaacccattgcctgtgctctccggggctgaattggagaag
gctcacttagctctgattgactacctgacacagaaacgaagtcaattggtaaagaagctg
aatgactctgatcaccagtcaagtacctccccgctcatggaaggcactcccaccatcaaa
tccaagaagaagctgctacaaatcatcgacaccaccctgctcaagtgctatctccatacg
aatgtggccctggtggcccccttgctacgcctggagaacaatcactgccacatcgaggag
agcgagcatgtgctgaagaaggctcacaagtacagtgagcttatcatcctgtatgagaag
aaggggctccacgagaaagctctgcaggtgcttgtggaccagtccaagaaagccaactcc
cctctgaaaggccacgagaggacagtgcagtatctgcagcatctgggcacagaaaacctg
catttgattttctcctactcagtgtgggtactgagagacttcccagaagatggcctgaag
atatttactgaagatctcccggaagtggagtctctgccacgtgatcgagtcctcggcttc
ttaatagagaattttaagggtctggctattccttatctggaacacatcatccacgtttgg
gaggagacgggctctcggttccacaactgcctgatccagctctactgtgagaaggtgcaa
ggtctgatgaaggagtatctcctgtccttccctgcaggcaaaaccccagtcccagctgga
gaggaagagggtgagctgggagaataccggcaaaagctcctcatgttcttggagatttcc
agctgctatgatccaggccggctcatctgtgattttccctttgatggcctcttagaagaa
cgagctcttctgttggggcgcatggggaaacatgagcaagctcttttcatttatgtccac
atcttgaaggatacaaggatggctgaggagtattgccacaaacactatgaccaaaacaaa
gatggcaacaaagatgtgtatctgtccctgcttcggatgtacctgtcgccccccagcatt
cactgcctggggccaatcaagctggaactactggagccaaaagccaacctccaggccgct
ctgcaggtcctcgagctgcaccacagcaaactggacaccaccaaggccctcaaccttctg
ccagcaaacactcagatcaatgacatacgcatcttcctggaaaaggtcttggaagaaaat
gcacaaaagaaacggttcaatcaagtactcaagaaccttctccatgcagagttcctgagg
gtccaggaagagcggattttacaccagcaggtgaagtgcatcatcacagaggagaaggtg
tgcatggtgtgtaagaagaagattgggaacagtgcatttgcaagataccccaatggagtg
gtcgtgcactacttctgttccaaagaggtaaacccagctgacacttga
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