Pongo pygmaeus (Bornean orangutan): 129015301
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Entry
129015301 CDS
T10128
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04612
Antigen processing and presentation
ppyg05145
Toxoplasmosis
ppyg05152
Tuberculosis
ppyg05164
Influenza A
ppyg05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
129015301 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
129015301 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
129015301 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
129015301 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
129015301 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ppyg01001
]
129015301 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ppyg04054
]
129015301 (CIITA)
Enzymes [BR:
ppyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
129015301 (CIITA)
Protein kinases [BR:
ppyg01001
]
Serine/threonine kinases: Other
TAF1 family
129015301 (CIITA)
Pattern recognition receptors [BR:
ppyg04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
129015301 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
Motif
Other DBs
NCBI-GeneID:
129015301
NCBI-ProteinID:
XP_054308972
LinkDB
All DBs
Position
18:12626073..12689347
Genome browser
AA seq
1146 aa
AA seq
DB search
MTRGRAATDLPRPQSWREGEATSSARGSRGNSGSSQCAIMEVGPLEGGYLELLNSDADPL
CLYHFYDQMDLAGEEEIELYSEPDTDTINCDQFSRLLCDIEGDEETREAYANIAELDQYV
FQDSQLEGLSKDIFIEHIGPDEVIGESMEMPAEVGQKSQKRPFPEELPADLKHWKPAEPP
TVVTGSLLVGPVSNSSTLPCLPLSALFNQEPASGQTHLEKTDQIPIPSSSSSLSCLNLPE
GPIQFVPTISTLPHGLWQISGAGTEVSSIFIYHGEVPQASQVPPPSGLTVHGLPTSPDRP
GSTSPFAPSATDLPSMPEPALTSRANMTEHKTSPTQCQAAGEVSNKLPKWPEPVEQFYRS
LQDTYGAEPAGRDGILVEVDLVRARLERSSSKSLERELATPDWAERQLAQGGLAEVLLAD
KEHRRPRETRVIAVLGKAGQGKSYWAGAVSRAWACGRLPQYDFVFSVPCHCLNRPGDAYG
LQDLLFSLGPQPLVAADEVFSHILKRPDRVLLILDAFEELEAQDGFLHSTCGPAPAEPCS
LRGLLAGLFQKKLLRGCTLLLTARPRGRLVQSLSKADALFELSGFSMEQAQAYVMRYFES
SGMTEHQDRALTLLRDRPLLLSHSHSPTLCRAVCQLSEALLELGEDAKLPSTLTGLYVGL
LGRAALNSPPGALAELAKLAWELGRRHQSTLQEDQFPSADVRTWAMAKGLVQHPPGAAES
ELAFPSFLLQCFLGALWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLIFQ
PRARCLGALVGPSATALADRKQKVLARYLKRLQPGTLRARQLLELLHCAHEAEEAGIWQH
VVQELPARLSFLGTRLTPPDAHVLGKALEAAGRDFSLDLRSTGICPSGLGSLVGLSCVTR
FRAALSDTVVLWESLRQHGETKLLQAAEEKFTIEPFKAKSLKDVEDLGKLVQTQRTRSSS
EDTAGELPAVRDLKKLEFALGPISGPQTFPKLVQILTAFSSLQHLDLDALSENKIGDEGV
SQLSATFPQLKSLETLNLSQNNITDLGAYKLAEALPSLAASLLRLSLYNNCICDVGAESL
ARVLPDMVSLRVMDVQYNKFTAAGAQQLAASLRRCPHVETLAMWTPTIPFSVQEHLQQQD
SRISLR
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggggacgagctgccacagacttgccgcggccccagagctggcgggagggagag
gccaccagcagcgcgcgcgggagccgggggaacagcggcagctcacagtgtgccatcatg
gaggtggggccgctagaaggcggctacctggagctccttaacagcgatgctgaccccttg
tgcctctaccacttctacgaccagatggacctggctggagaagaagagattgagctctac
tcagaacccgacacagacaccatcaactgtgaccagttcagcaggctgttgtgtgacata
gaaggcgatgaagagaccagggaggcttatgccaatatcgcggaactggaccagtatgtg
ttccaggactcccagctggagggcctgagcaaagacattttcatagagcacataggaccg
gatgaagtgattggtgagagtatggagatgccagcagaagttgggcagaaaagtcagaaa
agacccttcccagaggagcttccggcagacctgaagcactggaagccagctgagcccccc
actgtggtgactggcagtctcctagtgggaccagtgagcaactcctccaccctgccctgc
ctgccattgtctgcgctgttcaaccaggagccagcctccggccagacgcacctggagaaa
accgaccagattcccataccttcctccagttcctcgttgagctgcctgaatctccctgag
ggacccatccagtttgtccccaccatctccactctgccccatgggctctggcaaatctct
ggggctggaacagaggtctccagtatattcatctaccatggtgaggtgccccaggccagc
caagtaccccctcccagtggactcactgtccacggcctcccaacatctccagaccggcca
ggctccaccagcccctttgctccatcagccactgacctgcccagcatgcctgaacctgcc
ctgacctcccgagcaaacatgacagagcacaagacgtcccccacccaatgccaggcagct
ggagaggtctccaacaagcttccaaaatggcctgagccagtggagcagttctaccgctca
ctgcaggacacgtatggggccgagcccgcaggccgcgatggcatcctggtggaggtggat
ctggtgcgggccaggctggagaggagcagcagcaagagcctggagcgggaactggccacc
ccggactgggcagaacggcagctggcccaaggaggactggctgaggtgctgttggctgac
aaggagcaccggcggccgcgtgagacacgagtgattgctgtgctgggcaaagctggtcag
ggcaagagctattgggctggggcagtgagccgggcctgggcttgtggccggcttccccag
tacgactttgtcttctctgtcccctgccactgcttgaaccgtccgggggatgcctatggc
ctgcaggatctgctcttctccctgggcccacagccactcgtggcggccgatgaggttttc
agccacatcttgaagagacctgaccgcgttctgctcatcctagacgccttcgaggagctg
gaagcacaagatggcttcctgcacagcacgtgcggaccggcaccggcggagccctgctcc
ctccgggggctgctggccggccttttccagaagaagctgctccgaggttgcaccctcctc
ctcacagcccggccccggggccgcctggtccagagcctgagcaaggccgacgccctattt
gagctgtccggcttctccatggagcaggcccaggcctacgtgatgcgctactttgagagc
tcagggatgaccgagcaccaagacagagccctgacgctcctccgggaccggccacttctt
ctcagtcacagccacagccctactttgtgccgggcagtgtgccagctctcagaggccctg
ctggagcttggggaggacgccaagctgccctccacgctcacgggactctatgtcggcctg
ctgggccgtgcagccctcaacagcccccccggggccctggcagagctggccaagctggcc
tgggagctgggccgcagacaccaaagtaccctacaagaggaccagttcccatccgcagac
gtgaggacctgggcgatggccaaaggcttagtccaacaccccccaggggccgcagagtcc
gagctggccttccccagcttcctcctgcaatgcttcctgggggccctgtggctggctctg
agtggcgaaatcaaggacaaggagctccctcagtatctagcattgaccccaaggaagaag
aggccctatgacaactggctggagggcgtgccacgctttctagccgggctgatcttccag
cctcgcgcccgctgcctgggagccctagtcgggccatcggcgactgccttggcggacagg
aagcagaaggtgcttgcgaggtacctgaagcggctgcagccggggacactgcgggcgcgg
cagctgctggagctgctgcactgcgcccacgaggccgaggaggctggaatttggcagcac
gtggtgcaggagctccccgcccgcctctcttttctgggcacccgtctcacgcctcctgat
gcacatgtactgggcaaggccttggaggcggcgggccgagacttctccctggacctccgc
agcactggcatttgcccctctggattggggagcctcgtgggactcagctgtgtcacccgt
ttcagggctgccttgagtgacacagtggtgctgtgggagtccctgcggcagcatggggag
accaagctacttcaggcagcagaggagaagttcaccattgagcctttcaaagccaagtcc
ctgaaggatgtggaagacctgggaaagcttgtgcagactcagaggacgagaagttcctcg
gaagacacagctggggagctccctgctgttcgggacctaaagaaactggagtttgcgctg
ggccccatctcaggcccccagactttccccaaactggtgcagatcctcacggccttttcc
tccctgcagcatctggacctggatgcgctgagtgagaacaagatcggggacgagggtgtc
tcgcagctctcagccaccttcccccagctgaagtccttggaaaccctcaacctgtcccag
aacaacatcactgacctgggtgcctacaaactcgccgaggccctgccttcactcgctgca
tccctgctcaggctaagcttgtacaataactgcatctgcgacgtgggagccgagagcctg
gctcgtgtgcttccggacatggtgtccctccgggtgatggacgtccagtacaacaagttc
acggctgccggggcccagcagctcgctgccagccttcggaggtgtcctcatgtggagacg
ctggcgatgtggacgcccaccatcccattcagtgtccaggaacacctgcaacaacaggat
tcacggatcagcctgagatga
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