Pongo pygmaeus (Bornean orangutan): 129015363
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Entry
129015363 CDS
T10128
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03040
Spliceosome
Brite
Enzymes [BR:
ppyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129015363 (DHX38)
Spliceosome [BR:
ppyg03041
]
Complex C
Other components
Step II factors
129015363 (DHX38)
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GFIT
Other DBs
NCBI-GeneID:
129015363
NCBI-ProteinID:
XP_054309182
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Position
18:complement(69543840..69563260)
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AA seq
1233 aa
AA seq
DB search
MEDTSEDASIHRLEGTDLDCQVGGLICKTKSAASEQHVFKAPAPRPSLLGLDLLASLKRR
EREEKDDGEDKKKSKISSYKDWEESKDDQKDAEEEGGDQAGRNIRKDRHYRSARVETPSH
PGGVSEEFWERSRQRERERREHGVYASSKEEKDWKKEKSRDRDYDRKRDRDERDRSRHSS
RSERDGGSERSSRRNEPESPRHRPKDAATPSRSTWEEEDSCSGSSRRSQWESPSPTPSYR
DSERSHRLSTRDRDRSVRSKYSDDTPLPTPSYKYNEWADDRRHLGSTPRLSRGRGRREEG
EEGISFDTEDERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEDYVRRREQHLHKQKQ
KRISAQRRQINEDNERWETNRMLTSGVVHRLEVDEDFEEDNAAKVHLMVHNLVPPFLDGR
IVFTKQPEPVIPVKDATSDLAIIARKGSQTVRKHREQKERKKAQHKHWELAGTKLGDIMG
VKKEEEPDKAVTEDGKVDYRTEQKFADHMKRKSEASSEFAKKKSILEQRQYLPIFAVQQE
LLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEE
MGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLN
TDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQ
EDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYS
QLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDAL
QIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKS
LGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTVCSSLLGGLTSTGRLMVEFPLDPA
LSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNV
YLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCIC
AAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVT
AVDGEWLAELGPMFYSVKQAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRS
PLGSVRSMKIYTPGRKEQGEPMTPRRTPARFGL
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaccagtgaggatgcctcgatccatcgattggaaggcactgatctggactgt
caggttggtggtcttatttgcaagaccaaaagtgcggccagcgagcagcatgtcttcaag
gctcctgctccccgcccttcattactgggactggacttactggcttccctgaaacggaga
gagcgagaggagaaggatgatggggaggacaagaagaagtccaaaatctcctcctacaag
gactgggaagagagcaaggatgaccagaaggatgctgaggaagagggcggtgaccaggct
ggccgaaatatccggaaagacagacattatcgatctgctcgggtagagactccatcccat
ccaggtggtgtgagcgaagagttttgggaacgcagtcggcagagagagcgggagcggcgg
gaacatggtgtctatgcctcgtccaaagaagaaaaggattggaagaaggagaaatcgcgg
gatcgagactatgaccgcaagagggacagagatgagcgggatagaagtaggcacagcagc
agatcggagcgagatggagggtcagagcgtagcagcagaagaaatgaacccgagagccca
cgacatcgacctaaagatgcagccaccccttcaaggtctacctgggaggaagaggacagt
tgctctggctcctcaaggcgctcacagtgggaatcgccctccccgacgccttcctatcgg
gattctgagcggagccatcggctgtccactcgagatcgagacaggtctgtgaggagcaag
tactcggatgacacgcctctgccaactccctcctacaaatacaacgagtgggccgatgac
agaagacacttggggtccaccccgcgtctgtccaggggccgaggaagacgcgaggagggc
gaagaaggaatttcatttgacacggaggacgagcggcagcagtgggaggatgaccagagg
caagccgatcgggattggtacatgatggacgagggctatgatgagttccacaaccctctg
gcctattcctccgaggactacgtgaggaggcgggagcagcacctgcataaacagaagcag
aagcgcatttcagctcagcggagacagatcaatgaggataacgagcgctgggagacaaac
cgcatgctcaccagtggggtggtccatcggctggaggtggatgaggactttgaagaggac
aatgcagccaaggtgcatctgatggtgcacaatctggtgcctccctttctggatgggcgc
attgtcttcaccaagcagccggagccggtgattccagtgaaggacgccacttctgacctg
gccatcattgctcggaaaggcagccaaacagtgcggaagcatagggagcagaaggagcgc
aagaaggctcagcacaaacactgggaactggctgggaccaaactgggagatataatgggc
gtcaagaaggaggaagagccagataaagctgtgacggaggatgggaaggtggactacagg
acagagcagaagtttgcagatcacatgaagagaaagagcgaagccagcagtgaatttgca
aagaagaagtccatcctggagcagaggcagtacctgcccatcttcgcagtgcagcaggag
ctgctcactattatcagagacaacagcatcgtgatcgtggttggggagacggggagtggt
aagaccactcagctgacacagtacctgcatgaagatggttacacggactatgggatgatt
gggtgtacccagccccggcgtgtagctgccatgtcagtggccaagagagtcagtgaagag
atggggggaaaccttggcgaggaggtgggctatgccatccgctttgaagactgcacttca
gagaacaccttgatcaaatacatgactgacgggatcctgctccgagagtccctccgggaa
gccgacctggatcactacagtgccatcatcatggacgaggcccacgagcgctccctcaac
actgacgtgctcttcgggctgctccgggaggtagtggctcggcgctcagacctgaagctc
attgtcacatcagccacgatggatgcggagaagtttgctgccttttttgggaatgtcccc
atcttccacatccctggccgtaccttccctgttgatatcctcttcagcaagaccccacag
gaggattacgtggaggctgcagtgaagcagtccttgcaggtgcacctgtcgggggcccct
ggagacatccttatcttcatgcctggccaagaggacattgaggtgacctcagaccagatt
gtggagcatctggaggaactggagaacgcacctgccctggctgtgctgcccatctactct
cagctgccttctgacctccaggccaaaatcttccagaaggctccagatggtgttcggaag
tgcatcgttgccaccaatattgccgagacgtctctgactgttgacggcatcatgtttgtt
atcgattctggttattgcaaattaaaggtcttcaaccccaggattggcatggatgctctg
cagatctatcccattagccaggccaatgccaaccagcggtcagggcgagccggcaggacg
ggcccaggtcagtgtttcaggctctacacccagagtgcctacaagaatgagctcctgacc
accacggtgcccgagatccagaggaccaacctggccaacgtggtgctgctgctcaagtcc
ctcggggtgcaggacctgctgcagttccacttcatggacccgcccccggaggacaacatg
ctcaactctatgtatcagctctggatcctcggggccctggacaacacagtttgctcatct
ctcctaggtggtctgacctctactgggcggctgatggtggagttcccgctggaccctgcc
ctgtccaagatgctcatcgtgtcctgtgacatgggctgcagctctgagatcctgctcatt
gtctccatgctctcggtccccgccatcttctacaggcccaagggtcgagaggaggagagt
gatcaaatccgggagaagttcgctgttcctgagagcgatcatttgacctacctgaatgtc
tacctgcagtggaagaacaataattactccaccatctggtgtaacgatcatttcatccat
gctaaggccatgcggaaggtccgggaggtgcgagctcaactcaaggacatcatggtgcag
cagcggatgagcctggcctcgtgtggcactgactgggacatcgtcaggaagtgcatctgt
gctgcctatttccaccaagcagccaagctcaagggaatcggggagtatgtgaacatccgc
actgggatgccctgccacttgcaccccaccagctccctttttggaatgggctacacccca
gattacatagtgtatcacgagttggtcatgaccaccaaggagtacatgcagtgcgtgacc
gctgtggacggggagtggctggcggagctgggccccatgttctatagcgtgaaacaggcg
ggcaagtcacggcaggagaaccgtcgtcgggccaaagaggaagcctctgccatggaggag
gagatggcgctggccgaggagcagctgcgagcccggcggcaggagcaggagaagcgcagc
cccctgggcagtgtcaggtctatgaagatctacactccaggccggaaagagcaaggggag
cccatgacccctcgccgcacgccagcccgctttggtctgtga
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