Pongo pygmaeus (Bornean orangutan): 129015466
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Entry
129015466 CDS
T10128
Symbol
RPGRIP1L
Name
(RefSeq) protein fantom isoform X1
KO
K16550
protein fantom
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ppyg01009
]
129015466 (RPGRIP1L)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ppyg03037
]
129015466 (RPGRIP1L)
Protein phosphatases and associated proteins [BR:
ppyg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129015466 (RPGRIP1L)
Cilium and associated proteins [BR:
ppyg03037
]
Primary cilia and associated proteins
MKS complex
129015466 (RPGRIP1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPGR1_C
C2-C2_1
C2
Motif
Other DBs
NCBI-GeneID:
129015466
NCBI-ProteinID:
XP_054309490
LinkDB
All DBs
Position
18:complement(50686508..50790689)
Genome browser
AA seq
1269 aa
AA seq
DB search
MSGPTDETAGDLPVKDTGLNLFGMGGLQETSTTRTMKSRQAVSRVSREELEDRFLRLHDE
NILLKQHARKQEDKIKRMATKLIRLVNDKKRYERVGGGPKRLGRDVEMEEMIEQLQEKVH
ELEKQNEALKNRLISAKQQLQTQGYRQTPYNNVQSRINTGRRKANENAGLQECPRKGIKF
QDVDVAETLHPMFTKYGNSLLEEARGEIRNLENVIQSQRGQIEELEHLAEILKTQLRRKE
NEIELSLLQLREQQATDQRSNIRDNVEMIKLHKQLVEKSNALSAMEGKFIQLQEKQRTLR
ISHDALMANGGELNMQLKEQRLKCCSLEKQLHSMKFSERRIEELQDRINDLEKERELLKE
NYDKLYDSAFSAAHEEQWKLKEQQLKVQIAQLETALKSDLTDKTEILDRLKTERDQNEKL
VQENRELQLQYLEQKQQLDELKKRIKLYNQENDINADELSEALLLIKAQKEQKNGDLSFL
VKVDSEINKDLERSMRELQATHAETVQELEKTRNMLIMQHKINKDYQLEVEAVTRKMENL
QQDYELKVEQYVHLLDIRAARIHKLEAQLKDIAYGTKQYKFKPEIMPDDSVDEFDETIHL
ERGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVRGLHPEYNFTSQ
YLVHVNDLFLQYIQKNTITLEVHQAYSTEYETIAACQLKFHEILEKSGRIFCTASLVGTK
GDIPNFGTVEYWFRLRVPMDQAIRLYRERAKALGYITSNFKGPEHMQSLSQQAPKTAQLS
STNSTDGNLNELHITIRCCNHLQSRASHLQPHPYVVYKFFDFADHDTAIIPSSNDPQFDD
HMYFPVPMNMDLDRYLKSESLSFYVFDDNDTQENIYIGKVNVPLISLAHDRCISGIFELT
DHQKHPAGTIHVILKWKFSYLPPSGSITTEDLRNFIHREEPEVVQRLPPASSVSTLAVAP
RPKPRQRLTPVDKKVSFVDIMPRQSDETSPPPEDMKEISPEVEHIPEIEINMLTVPHVPK
VSQESSVDEVKENTEKMHQGKDDVSLLSEGQLAEQSLASSEGETEITEDLEPEVEEDMSA
SDSDDCIIPGPISKNIKQPSEKIRIEIIALSLNDSQVTMDDTIQRLFVECRFYSLPAEET
PVSLPKPKSGQWVYYNYSNVIYVDKENNQAKRDILKAILQKQEMPNRSIRFTVVSDPPED
EQDLECEDIGVAHVDLADMFQEGRDLIEQNIDVFDARADGEGIGKLRVTVEALHALQSVY
KQYRDDLEA
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtccaactgatgagactgcaggagacttgcctgtgaaggatacaggtctaaac
ctctttggaatgggagggttacaagaaacttcaacaacacggacaatgaagtctcgccag
gcagtgtcacgtgtcagtcgtgaggaactggaagacagatttttgcgtttgcatgatgag
aacattttacttaaacagcatgcccgcaagcaggaggataaaattaaaagaatggccacc
aagttaatacggctagttaatgacaagaaaagatatgagcgggttggtggcggccccaag
cggctgggacgagatgtggaaatggaagaaatgattgagcagctgcaagagaaagttcat
gagcttgaaaaacaaaatgaagccctcaaaaacagactgatttcagccaaacagcaactt
caaacccagggttacaggcaaactccatacaataatgtacaatctcgtattaacactggg
cgtagaaaagcaaatgaaaatgctggtttacaggaatgccccaggaaaggtataaaattc
caagatgtagatgtagcagaaactctacatcccatgtttacaaaatatggcaacagttta
cttgaagaagccagaggagaaataagaaatttagaaaacgttattcagtcacaaagaggc
cagatagaggagttagagcacttggctgagatcctgaaaactcagttgaggagaaaagaa
aatgaaattgagttatctcttctgcagcttcgagaacagcaagctacagatcaaaggtca
aatattcgggacaatgtagaaatgattaagcttcataaacagctagtagagaaaagcaat
gctctttcagcaatggaaggaaaatttattcagcttcaagagaagcaaagaactctcaga
atcagccatgatgctttgatggcaaatgggggtgagttaaacatgcaacttaaagagcag
cgtttaaaatgctgcagtcttgagaaacaattacattctatgaagttttctgaaagaaga
atagaagagctgcaggatagaattaatgatttagaaaaggaacgggaacttttaaaggaa
aactatgataaactttatgacagtgccttcagtgctgcccatgaagagcaatggaagtta
aaggagcaacagctgaaagtacagattgctcagctcgagactgccttgaagtctgactta
acagacaaaactgaaatccttgacagattaaaaactgaaagagatcaaaatgaaaaactc
gttcaagagaatagagaactacagttacagtatctggaacaaaagcaacaacttgatgaa
cttaaaaaacgcataaaattgtacaaccaggagaatgatattaatgctgatgaattgagt
gaagctctcctacttataaaggctcaaaaagaacaaaaaaatggagacctttccttttta
gtgaaagtagatagtgaaattaataaagatctagaacgctctatgagagagctgcaagca
actcatgcagaaacggtgcaagagctggaaaagacaagaaacatgctaattatgcaacac
aaaattaataaagattatcagttggaggttgaggcagtgacccgtaagatggaaaatctg
cagcaagattatgaactcaaagtggaacagtatgttcatcttcttgatatcagggctgca
cgtatccataaactagaagcccaattaaaggatattgcctatggcaccaagcagtacaaa
tttaaaccagaaatcatgccagatgactctgttgatgaatttgatgaaaccatccactta
gaacgaggcgaaaatctatttgaaatccatatcaacaaagtaaccttttcttctgaagtt
ttacaggcatctggagataaagagcctgtcactttctgtacctatgctttctatgatttt
gaactacagacaactcctgtagtgcgaggccttcatcccgaatataacttcacttctcaa
tatcttgttcatgttaatgacttatttttgcaatatattcagaagaatactatcaccctt
gaggtccaccaagcttatagcacagaatatgaaacaattgcagcatgtcaattaaaattt
cacgaaattcttgaaaaaagtggccgaatattttgtacagcaagtttggttggaacaaaa
ggagacatcccaaattttggcacagtggaatactggttccgattaagagttcccatggat
caagcaattcgactttatcgagaaagggcaaaggctttgggatatataacatcaaatttt
aaggggccagagcatatgcagtcgttaagtcagcaagcacccaaaactgctcaactcagt
tctacaaattccacagatggcaacttaaatgaacttcacattacaataagatgttgcaac
cacctgcagtcccgagcaagccacctgcagccacacccatatgttgtgtacaagtttttt
gattttgcagaccatgatacagctatcattcccagtagcaatgatccacagtttgatgat
catatgtatttccccgtgccaatgaatatggatttggatcgataccttaagtcagagtct
ctgagtttttatgtttttgatgataatgatacccaggagaatatttacataggaaaagtc
aatgtgcctctgatttcgttggcacatgacaggtgtatctcaggaatatttgagttaaca
gaccatcaaaagcatcctgctggcaccatccatgttatattgaaatggaaattttcttac
cttccaccaagtggatcaataacaactgaagacttaagaaatttcattcacagagaagag
ccagaagttgttcaaagacttcctccagcatcctctgttagcacactagctgtagcacca
agacctaaaccaagacaacgtttaacacctgtagataagaaagtatctttcgtggatatc
atgccacgtcagagtgatgagacttctcctcctcctgaagatatgaaggaaatttcacca
gaggtagagcatataccagaaatagaaattaatatgctgactgttccacatgttcccaag
gtttcacaagaaagcagtgtagatgaggtaaaagagaatactgagaaaatgcaccaagga
aaagatgatgtgtctttactatctgaaggtcagcttgcagaacaaagcttggcatcttct
gaaggtgaaacagaaataacagaggacttggaaccagaagttgaagaggacatgtcagct
tctgacagtgatgactgtattattccaggtcctatctccaagaatatcaaacagccatca
gaaaaaattcggattgagatcatagctctaagccttaatgattctcaagtaaccatggat
gacactatccaacggctgttcgttgagtgccgattctacagtcttcctgctgaagagaca
cccgtgtcgcttccaaaacccaagagtgggcagtgggtctactataactatagcaatgtg
atctacgtggataaagaaaacaaccaagcaaagagagacatcttaaaagctatactacaa
aaacaagagatgcctaatagaagcattcgcttcaccgtggtcagtgatcctccagaagac
gagcaggacctggagtgtgaggacattggcgtggctcacgttgacctcgccgacatgttt
caggaagggagggacctcattgagcaaaatatcgatgtttttgatgcacgagcagatggt
gaaggtattggcaagctcagggtaacagtcgaagctctccatgccctccagtctgtctac
aagcaatacagagatgacttggaggcttga
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