Pongo pygmaeus (Bornean orangutan): 129015641
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Entry
129015641 CDS
T10128
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
ppyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129015641 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
129015641 (EDC4)
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Ortholog
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Gene cluster
GFIT
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NCBI-GeneID:
129015641
NCBI-ProteinID:
XP_054309949
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Position
18:65241092..65252528
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AA seq
1437 aa
AA seq
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MASCASIDIEDATQHLRDILKLDRPAGGPSAESPRPSSAYNGDLNGLLVPDPLCSGDGTS
TNKTGLRTMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSVA
DLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCPF
IPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSSHSTWPVDVSQIKQGFIVVKGHSTCL
SEGALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQ
DPDVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQEEGHACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPA
EEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHTA
HEDFTFGESRPELGSEGLGSAAHGSQPDLRRIVELPAPADFLSLSSETKPKLMTPDAFMT
PSASLQQITASPSSSSSGSSSSSSSSSSSLTAVSAMSSTSAVDPSLTRPPEELTLSPKLQ
LDGSLTMSSSGSLQASPRGLLPGLLPAPADKLTPKGPGQVPTAASALSLELQEVEPLGLP
QASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEGLEPDSMASAASALHLLS
PRPRPGPELGPQLGLDGGPGDGDRHSTPSLLEAALTQEASTPDSQVWPTAPDITRETCST
LAESPRNGLQEKHKSLAFHRPPYHLLQQRDSQDASAEQSDHDDEVASLASASGGFGTKVP
APRLPAKDWKTKGSPRTSPKLRRKSKKDDGDAAMGSRLTEHQVAEPPEDWPALIWQQQRE
LAELRHSQEELLQRLCTQLEGLQSTVTGHVERALETRHEQERILEAGSTTWHRDRGSILG
LGRSTRPAPGLFLSYGSERRLERALAEGQQRGGQLQEQLTQQLSQALSSAVAGRLERSIR
DEIKKTVPPCVSRSLEPMAGQLSNSVATKLTAVEGSMKENISKLLKSKNLTDAIARAAAD
TLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSFRLGTQEYLQQLESHMKSRKAREQ
EAREPVLAQLRGLVSTLQSATEQMAATVASSVRAEVQHQLHVAVGSLQESILAQVQRIVK
GEVSVALKEQQAAVTSSIMQAMRSAAGTPVPSAHLDCQAQQAHILQLLQQGHLNQAFQQA
LTAADLNLVLYVCETVDPAQVFGQPPCPLSQPVLLSLIQQLASDLGTRTDLKLSYLEEAV
MHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNSLGKAARRLSLMLHGLVTPSLP
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcgagcatcgacatcgaggacgccacgcagcatctgcgggacatcctc
aagctggaccggcccgcgggcggccccagtgcagaaagcccacggccatccagtgcctac
aatggggacctcaatggacttctggtcccagacccgctctgctcaggtgatggtacctca
acaaacaagactggccttcggaccatgccacccattaacctgcaagagaagcaggtcatc
tgtctctcaggagatgatagctccacctgcattggaattttggccaaggaggtggagatt
gtggccagcagtgactctagcatttcaagcaaggcccggggaagcaacaaggtgaaaatt
cagcctgtcgccaagtatgactgggagcagaagtactactatggcaacctgattgctgtg
tctaactccttcttggcctatgccattcgggctgccaacaatggctctgccatggtgcgg
gtgatcagtgtcagcacttcggagcggaccttgctcaagggcttcacaggcagtgtggct
gatctggctttcgcgcacctcaactctccacagctggcctgcctggatgaggcaggcaac
ctgttcgtgtggcgcttggctctggttaatggcaaaattcaagaagagatcttggtccat
attcggcagccagagggcacgccactgaaccactttcgcaggatcatctggtgccccttc
atccctgaggagagcgaggactgctgtgaagagagcagccctacagtggccctgctgcat
gaagaccgggctgaggtgtgggacctggacatgctccgctccagccacagtacctggcct
gtggatgtcagccagatcaagcagggcttcattgtggtaaaaggtcatagcacgtgcctc
agtgaaggagccctctcacctgatgggactgtgctggctactgcgagccatgatggctat
gtcaagttctggcagatctacattgaggggcaagatgagccaaggtgtctgcacgagtgg
aagcctcatgatgggcggcccctctcctgcctcctgttctgtgacaaccataagaaacaa
gaccctgatgtccctttctggaggttccttattactggtgctgaccagaaccgagagtta
aagatgtggtgtacagtatcctggacctgcctgcagactattcgcttctccccagatatc
ttcagctcagtgagtgtgccccctagcctcaaggtttgcttggacctctcagcagaatac
ctgattctcagcgatgtgcaacggaaggtcctctatgtgatggagctgctgcaaaaccag
gaggagggccatgcctgcttcagctccatctcggagttcctgctcacccaccctgtgctg
agcttcggtatccaggttgtgagtcgctgccggctacggcacactgaggtgctgcctgcc
gaagaggaaaatgacagcctgggtgctgatggtacccatggagccggtgccatggagtct
gcggccggtgtgctcatcaagctcttttgtgtgcatactaaggcactgcaagatgtgcag
atccgcttccagccacagctgaaccctgatgtggtggccccactgcccacccacactgct
cacgaggactttacatttggagagtctcggcccgaactgggctccgagggcctggggtca
gctgctcacggctcccagcctgacctccgacgaatcgtggagctgcctgcacccgccgac
ttcctcagtctgagcagtgagaccaagcccaagttgatgacacctgacgccttcatgaca
cctagcgcctccttgcagcagatcactgcctctcccagcagcagcagcagcggtagcagc
agcagcagcagcagtagcagcagctcccttacagctgtgtctgccatgagcagcacctca
gctgtggacccctccttgaccaggccacctgaggagctgaccttgagccccaagctgcag
ctggatggcagcctgacaatgagcagcagtggcagccttcaggcaagcccgcgcggcctc
cttcctggcctgctcccagccccagctgacaaactgactcccaaggggccgggccaggtg
cctactgccgcctctgcactgtccctggaactgcaggaagtggagcccctggggctaccc
caagcctcccctagccgcacccgttcccctgatgtcatctcctcagcttctactgccctg
tcccaggacatccctgagattgcgtctgaggccctgtcccgtggttttggctcctctgca
ccagagggccttgagccagacagtatggcttcagctgcctcggcactgcacctgctgtcc
ccacggccccggccagggcctgagctcggcccccagcttggccttgatggaggtcctggg
gatggagatcggcatagtaccccctccctcctggaggcagccttgacccaggaggcctca
actcctgatagtcaggtttggcccacagcacctgacattactcgtgagacctgcagcacc
ctggcagaaagccccaggaatggccttcaggaaaagcacaagagcctagccttccaccga
ccaccatatcacctgctgcagcaacgtgacagccaggatgccagtgctgagcaaagtgac
catgatgatgaggtggccagccttgcctctgcttcaggaggctttggcaccaaagttcct
gctccacggctgcctgccaaggactggaagaccaagggatcccctcgaacctcacccaag
ctcaggaggaaaagcaagaaggatgatggggatgcagccatgggatcccggctcacagag
caccaggtggcagagccccctgaggactggccagcactaatttggcaacagcagagagag
ctggcagagctgcggcacagccaagaagagctgctgcagcgtctgtgtacccaactcgaa
ggcctgcagagcacagtcacaggccacgtagaacgtgcccttgagacccggcacgagcag
gaacgtatccttgaggctggtagcacaacatggcatagggacaggggcagcattcttggc
ctgggaaggagtacacgacctgctccaggcctgttccttagctacggctcagagcggcgg
ctggagcgagcactggctgaggggcagcagcggggagggcagctgcaggagcagctgaca
caacagttgtcccaagcactgtcttcagctgtagctgggcgtctagagcgcagcatacgg
gatgagatcaagaagacagtccctccatgtgtctcaaggagtctggagcctatggcaggc
caactgagcaactcagtggctaccaagctcacagctgtggagggcagcatgaaagagaac
atctccaagctgctcaagtccaagaacttgactgatgccatcgcccgagcagctgcagac
acattacaggggccgatgcaggctgcctaccgggaagccttccagagtgtggtgctgccg
gcctttgagaagagctgccaggccatgttccagcaaatcaatgatagcttccggctgggg
acacaggaatacttgcagcagctagaaagccacatgaagagccggaaggcacgggaacag
gaggccagggagcctgtgctagcccagctgcggggcctggtcagcacactgcagagtgcc
actgagcagatggcagccaccgtggccagcagtgttcgggctgaggtgcagcaccagctg
catgtggctgtgggcagcctgcaggagtccattttagcacaggtacagcgcatcgttaag
ggtgaggtgagtgtggcgctcaaggagcagcaggccgccgtcacctccagcatcatgcag
gccatgcgctcagctgctggcacacctgtcccttctgcccaccttgactgccaggcccag
caagcccatatcctgcagctgctgcagcaaggccacctcaatcaggccttccagcaggcg
ctgacagctgctgacctgaacctggtgctgtatgtatgtgaaactgtggacccagcccag
gtttttgggcagccaccctgcccactctcccagcctgtgctcctttccctcatccagcag
ctggcatctgaccttggcactcgaactgacctcaagctcagctacctggaagaggccgtg
atgcacctggaccacagtgaccccatcactcgggaccacatgggctccgttatggcccag
gtgcgccaaaagctttttcagttcctgcaggctgagccacacaactcacttggcaaagca
gcccggcgtctcagcctcatgctgcatggcctcgtgacccccagcctcccttag
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