Pongo pygmaeus (Bornean orangutan): 129015826
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Entry
129015826 CDS
T10128
Symbol
ATXN2L
Name
(RefSeq) ataxin-2-like protein isoform X1
KO
K23625
ataxin 2/2L
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg05014
Amyotrophic lateral sclerosis
ppyg05017
Spinocerebellar ataxia
ppyg05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129015826 (ATXN2L)
05017 Spinocerebellar ataxia
129015826 (ATXN2L)
05022 Pathways of neurodegeneration - multiple diseases
129015826 (ATXN2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyg03019
]
129015826 (ATXN2L)
Messenger RNA biogenesis [BR:
ppyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
129015826 (ATXN2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
DUF5415
Motif
Other DBs
NCBI-GeneID:
129015826
NCBI-ProteinID:
XP_054310392
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All DBs
Position
18:complement(31222567..31237391)
Genome browser
AA seq
1102 aa
AA seq
DB search
MLKPQPPQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPTAASPCLG
PVAAAGSGLRRGAEGILAPQPPPPQHQERPGAAAIGSARGQSTGKGPPQSPVFEGVYNNS
RMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIVD
TMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDDY
DLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLAR
EIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLASREGKYIPLPQRVREGPR
GGVRCSSSRGGRPGLSSLPPRGPHHLDNNSPGPGSEARGINGGPSRMSPKAQRPLRGAKT
LSSPSNRPSGETSVPPPPAAPPFLPVGRMYPPRSPKSAAPAPISASCPEPPIGSAVPTSS
ASIPVTSSVSDPGVGSISPASPKISLAPTDVKELSTKEPGRTLEPQELARIAGKVPGLQN
EQKRFQLEELRKFGAQFKLQPSSSPENSLDPFPPRILKEEPKGKEKEVDVLLTSEPMGSP
VSSKTESVSDKEDKPPLASAGGTEGPEQPPPPCPSQTGSPPVGLIKGEDKDEGPVAEQVK
KSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIP
QIHMGPAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAG
PPLVAATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIV
SSSTPQYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQ
HQAGQAPHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHHQQLPH
GFTNMAHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALSA
STPSPYPYIGHPQGEQPGQAPGFPGGADDRILCRVGRSHSRRRQGLAPGSVLCFPPSSLS
CDPAAPLPTASPALSDPDCLLT
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcctcagccgccacaacagccctcccagccccagcagccgccccccacgcaa
caggccgtggcccgtcggccccccgggggcaccagccctcccaacggcggcctcccgggg
ccgctggccacctctgcggctcctcccgggcctccaacggccgcctccccctgcctgggg
cctgtggccgctgccgggagcgggctccgccggggagccgaaggcatcttggcgccgcag
ccgccgccgccgcagcaccaggagaggccgggggccgcagccatcggcagcgccagggga
cagagcacaggaaagggacccccacagtcacctgtgtttgaaggcgtctacaacaattcc
agaatgctgcatttccttacagctgttgtgggctccacttgtgatgtaaaggtgaaaaat
ggtaccacttatgagggtatcttcaagacgctaagctcaaagtttgaactagccgtggat
gctgtgcaccggaaagcatctgagccagcaggtggccctcgtcgggaagacattgtggac
accatggtgtttaagccaagtgatgtcatgcttgttcacttccgaaatgttgacttcaat
tacgctactaaagacaagttcaccgattcagccattgccatgaactcaaaagtgaatggg
gaacacaaagagaaggtgcttcagcgctgggaggggggtgacagcaacagcgacgactat
gacctcgagtctgacatgtccaatggatgggaccccaatgaaatgttcaagttcaatgag
gagaactacggtgtgaagactacctatgatagcagtctttcttcttatacggtgccctta
gaaaaggacaactcagaagagtttcgtcagcgagagctgcgtgcggcccagttggctcga
gagattgaatcaagcccccagtaccgcctgcggatcgccatggagaacgacgatgggcgc
actgaagaggagaagcacagtgcagtccagcggcagggctcagggcgagagagccccagc
ttggcatccagggaggggaagtatatccctctgcctcaacgagtccgggaaggtccccgg
ggaggagttcgatgcagcagctctcggggtggtcggcctggccttagctctttgccacct
cgtggccctcaccatctggacaataacagccctggcccaggttctgaggcccgtggtatc
aatggaggtccttcccgcatgtccccaaaggcacagcggcctctgagaggtgccaagact
ctgtcttcgcccagtaataggccttctggagaaacttctgttccacctcctcctgcagct
cccccttttcttccagtgggccggatgtatcccccgcgttctcccaagtctgctgcccct
gccccaatctcagcttcctgtcctgagcctcccatcggctcggcagtgccaacctcttca
gcctccatccctgtgacctcatcagtctcagatcctggagtgggctccatttccccagct
tctccaaagatctccctggcccccacagatgtaaaagaactctctaccaaggaacctgga
agaactctggagccccaggagctggctcggatagctgggaaagtccccggtcttcagaat
gaacagaaacgattccaactggaagaactgagaaagtttggggcccagtttaagcttcag
cccagtagctcccctgagaacagcctggatccttttcctccccggatcttaaaggaggag
cccaaaggaaaggagaaggaggttgatgttctgttgacttcagagcccatggggtctcct
gtctcctccaagacagagtccgtatcggataaagaggacaaaccacccctggcatcagca
ggaggcactgaggggccagagcagcccccaccaccttgcccaagccaaactggcagcccc
ccagtgggcctcatcaagggagaagacaaagatgagggccctgttgctgaacaagtaaag
aaatcaacgttgaaccctaatgctaaggagttcaatcctacaaagcctctgctgtctgtg
aataaatccaccagtaccccaacttctccggggccccggactcattcaactccctccatc
ccggtgctgacagcaggccagagtgggctatacagcccccagtacatctcatacatacct
cagatccacatgggaccagctgtgcaggcacctcaaatgtatccatatcctgtatccaat
tcagtgcctgggcagcagggcaagtaccggggagcaaaaggctccctgcctccgcagcgc
tcggaccaacaccagccagcctcagccccgccaatgatgcaggccgccgcggctgctggc
ccgcctctggtggctgccacgccctattcttcctacatcccctacaaccctcagcagttc
ccaggccagccggccatgatgcagcccatggcccactacccctcacagccggtgtttgcc
cccatgcttcagagcaacccacgcatgctgacatcgggcagccatccccaggccattgtg
tcatcctctacccctcagtacccttctgcagagcagcccaccccccaagccctttatgcc
actgttcaccagtcctacccacaccatgccacgcagctccatgcccaccagccgcagcca
gctaccacacctactggaagccagccgcagtcccagcatgcggcccccagtcctgtccag
catcaggcggggcaggccccacacttgggcagtggacagccacagcagaatctgtaccac
ccaggggccctgacaggcacgccgccctctctgccaccgggaccttctgcccagtcccct
cagagcagcttcccccagccagccgctgtgtatgccatccaccaccagcagctgccccac
ggcttcaccaatatggcccatgttacccaggcccatgtccaaactggaatcacagcagcc
ccgccccctcaccctggggctccccacccgccccaggtgatgctgctgcacccaccccag
agtcatggggggcccccccaaggcgcggtgccccagagtggggtgcctgcactctcagct
tccacaccctcaccctacccctacatcggacacccccaaggtgagcagcctggccaggcg
cctggatttccaggaggagccgatgacaggattctatgtagggtgggcagaagccacagt
cgccgccgccaggggcttgctcctggctctgtcctttgcttccctccgtcctcgctcagt
tgtgatccagcagcccccctccccactgcctccccagctctcagtgaccccgactgtctc
ctgacttag
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