Pongo pygmaeus (Bornean orangutan): 129015982
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Entry
129015982 CDS
T10128
Symbol
RNPS1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1 isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03013
Nucleocytoplasmic transport
ppyg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129015982 (RNPS1)
03015 mRNA surveillance pathway
129015982 (RNPS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyg03019
]
129015982 (RNPS1)
Messenger RNA biogenesis [BR:
ppyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129015982 (RNPS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RRM_3
RRM_ACIN1
RRM_occluded
Nup35_RRM_2
RRM_MUD2_C
Motif
Other DBs
NCBI-GeneID:
129015982
NCBI-ProteinID:
XP_054310794
LinkDB
All DBs
Position
18:complement(2387238..2402572)
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AA seq
305 aa
AA seq
DB search
MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD
KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS
SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI
FSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA
PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS
SNSSR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggatttatcaggagtgaaaaagaagagcttgctaggagtcaaagaaaataataaaaag
tccagcactagggctccttcacctaccaaacgcaaagaccgctcagatgagaagtccaag
gatcgctcaaaagataaaggggccaccaaggagtcgagtgagaaggatcgcggcagggac
aaaacccgaaagaggcgcagcgcttccagtggtagcagcagtaccaggtctcggtccagc
tcgacttccagctcaggctccagcaccagcactggctcaagcagtggctccagctcttcc
tcagcgtccagccgctcaggaagctccagcacctcccgcagctccagctctagcagctct
tctggctctccaagtccttctcggcgcagacacgacaacaggaggcgttcccgctccaaa
tccaaaccacctaaaagagatgaaaaggagaggaaaaggcggagcccatctcctaagccc
accaaagtgcacattgggagactcaccaggaatgtgacaaaggatcacatcatggagata
ttttccacctatgggaaaattaaaatgattgacatgcccgtggaaaggatgcatccccat
ctgtccaaaggctatgcatacgtagagtttgagaatccagatgaagctgagaaggcgctg
aagcacatggatggaggacaaattgatggccaggagatcactgccaccgccgtgctggcc
ccctggcctaggccaccccccaggagattcagccctcccaggagaatgttgccaccaccg
cctatgtggcgcaggtctcccccacggatgaggagaaggtcccgctccccgaggcgcagg
tcccccgtgcgccggagatcacggtccccgggccgccgccgccacaggagtcgctccagc
tccaactcctcccgataa
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