Pongo pygmaeus (Bornean orangutan): 129016956
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Entry
129016956 CDS
T10128
Symbol
ABCA5
Name
(RefSeq) cholesterol transporter ABCA5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129016956 (ABCA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppyg02000
]
129016956 (ABCA5)
Transporters [BR:
ppyg02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
129016956 (ABCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
MMR_HSR1
AAA_23
AAA_16
Motif
Other DBs
NCBI-GeneID:
129016956
NCBI-ProteinID:
XP_063512597
LinkDB
All DBs
Position
19:complement(87423881..87511416)
Genome browser
AA seq
1641 aa
AA seq
DB search
MSTAIREVGVWRQTRTLLLKNYLIKCRTKKSSVQEILFPLFFLFWLILISMMHPNKKYEE
VPNIELNPMDKFTLSNLILGYTPVTNITSSIMHKVSTDHLPDVIIPEEYTNEKEMLTSSL
SKPSNFVGVVFKDSMSYELRFFPDMIPVSSIYMDSRAGCSKSCEAAQYWSSGFTVLQASI
DAAIIQLKTNVSLWKELESTKAVIMGETAVVEIDTFPRGVILIYLVIAFSPFGYFLAIHV
VAEKEKKIKEFLKIMGLRDTAFWLSWVLLYTSLIFLMSLLMAVIATASLLFPQSSSIVIF
LLFFLYGLSSVFFALMLTPLFKKSKHVGIVEFFVTVAFGFIGLMIILIESFPKSLVWLFS
PFCHCTFVIGIAQVMHLEDFNEGALFSNLTAGPYPLIITIIMLTLNSIFYVLLAVYLDQV
IPGEFGLRRSSLYFLKPSYWSKSKRNYEELSEGNVNGNISFSEIIEPVSSEFVGKEAIRI
SGIQKTYRKKGESVEALRNLSFDIYEGQITALLGHSGTGKSTLINILCGLCPPSDGFASI
YGHRVSEIDEMFEARKMIGICPQLDIHFDVLTVEENLSILASIKGIPANNIIQEVQKVLL
DLDMQTIKDNQAKKLSGGQKRKLSLGIAVLGNPKILLLDEPTAGIDPCSRHIVWNLLKYR
KANRVTVFSTHFMDEADILADRKAVISQGMLKCVGSSMFLKSKWGIGYRLSMYIDKYCAT
ESLSSLVKQHIPGATLLQQNDQQLVYSLPFKDMDKFSGLFSALDSHSNLGVISYGVSMTT
LEDVFLKLEVEAEIDQADYSVFTQQPLEEEMDSKSFDEMEQSLLILSETKASLVSTMSLW
KQQMYTIAKFHFFTLKRESKSVRSVLLLLLIFFTVQIFMFLVHHSFKNAVVPIKLVPDLY
FLKPGDKPHKYKTSLLLQNSTDSDIGDLISFFTSQNIMVTMINDSDYVSMAPHSAALNVM
HSGKDYVFAAVFNSTMVYSLPILVNIISNYYLYHLNVTETIQIWSTPFFQEITDIVFKIE
LYFQAALLGIIVTAMPPYFAMENAENHKIKAYTQLKLSGLLPSAYWIGQAVVDIPLFFII
LILMLGSLLAFHYGLYFYTVKFLAVVFCLIGYVPSVILFTYIASFTFKKILNTKEFWSFI
YSVTALACIAITEITFFMGYTIATILHYAFCITIPVYPLLGCLISFIKISWKNVRKNADT
YNPWDRLSVAVILPYLQCVLWIFLLQYYEKKYGGRSIRKDPFFRNLSTKSKNRKLPEPPN
NEDEDEDVKAERLKVKELMSCQCCEEKPSIMVSNLHKEYDDKKDFLSRKVKKVATKYISF
CVKKGEILGLLGPNGAGKSTIINILVGDIEPTSGQVFLGDYSSETSEDDDSLKCMGYCPQ
INPLWPDTTLQEHFEIYGAVKGMSASDMKEVISRITNALDLKEHLQKTVKKLPAGIKRKL
CFALSMLGNPQITLLDEPSTGMDPKAKQHMWRAIRTAFKNKKRAAILTTHYMEEAEAVCD
RVAIMVSGQLRCIGTVQHLKSKFGKGYFLEIKLKDWIENLEVDRLQREIQYIFPNASRQE
SFSSILAYKIPKEDVQSLSQSFFKLEEAKHAFAIEEYSFSQATLEQVFVELTKEQEEEDN
SCGTLNSTLWWERTQEDRVVF
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgcaattagggaggtgggagtttggagacagaccagaacacttctactgaag
aattacttaattaaatgcagaaccaaaaagagtagtgttcaggaaattctttttccacta
ttttttttattttggttaatattaattagcatgatgcatccaaataagaaatatgaagaa
gtgcctaatatagaacttaatcctatggacaaatttactctttctaatctaattcttgga
tatactccagtgactaatattacaagcagcatcatgcacaaagtgtctactgatcatcta
cctgatgtcataattcctgaagaatatacaaatgaaaaagaaatgttaacatccagtctt
tctaagccaagcaactttgtaggtgtggttttcaaagactccatgtcctatgaacttcgt
ttttttcctgatatgattccagtatcttctatttatatggattcaagagctggctgttca
aaatcatgtgaggctgctcagtactggtcctcaggtttcacagttttacaagcatccata
gatgctgccattatacagttgaagaccaatgtttctctttggaaggagctggagtcaact
aaagctgttattatgggagaaactgctgttgtagaaatagatacctttccccgaggagta
attttaatatacctagttatagcattttcaccttttggatactttttggcaattcatgtc
gtagcagaaaaagaaaaaaaaataaaagaatttttaaagataatgggacttcgtgatact
gccttttggctttcctgggttcttctatatacaagtctaatttttcttatgtcccttctt
atggcagtcattgcaacagcttctttgttatttcctcaaagtagcagcattgtgatattt
ctgctttttttcctttatggattatcatctgtattttttgctttaatgctgacacctctt
tttaaaaaatcaaaacatgtgggaatagttgaattttttgttactgtggcttttggattt
attggccttatgataatcctcatagaaagttttcccaaatcgttagtgtggcttttcagt
cctttctgtcactgtacttttgtgattggtattgcacaggtcatgcatttagaagatttt
aatgaaggtgctttattttcaaatttgactgcaggcccgtatcctctaattattacaatt
atcatgctcacacttaatagtatattctatgtcctcttggctgtctatcttgatcaagtc
attccaggggaatttggcttacggagatcatctttgtattttctgaagccttcatattgg
tcaaagagcaaaagaaattatgaggagttatcagagggcaatgttaatggaaatattagt
tttagtgaaattattgagcctgtttcttcagaatttgtaggaaaagaagccataagaatt
agtggtattcagaagacatacagaaagaagggtgaaagtgtggaggctttgagaaatttg
tcgtttgacatatatgagggtcagattactgccttacttggccacagtggaacaggaaag
agtacattgataaatattctttgtggactctgcccaccttctgatgggtttgcatctata
tatggacacagagtctcagaaatagatgaaatgtttgaagcaagaaaaatgattggcatt
tgtccacagttagatatacactttgatgttttgacagtagaagagaatttatcaattttg
gcttcaatcaaagggataccagccaacaatataatacaagaagtgcagaaggttttacta
gatttagatatgcagactatcaaagataaccaagctaaaaaattaagtggtggtcaaaaa
agaaagctgtcattaggaattgctgttcttgggaacccaaagatactgctgctagatgaa
ccaacagctggaatagacccctgttctcgacatattgtatggaatcttttaaaatacaga
aaagccaatcgggtgacagtgttcagtactcatttcatggatgaagctgacattcttgca
gataggaaagctgtgatatcacaaggaatgctgaaatgtgttggttcttcaatgttcctc
aaaagtaaatgggggattggctaccgcctgagcatgtacatagacaaatattgtgccaca
gaatctctttcttcactggttaaacaacatatacctggagctactttattacaacagaat
gaccaacaacttgtgtatagcttgcctttcaaggacatggacaaattttcaggtttgttt
tctgccctagacagtcattcaaatttgggtgtcatttcttatggtgtttccatgacaact
ttggaagacgtatttttaaagctagaagttgaagcagaaattgaccaagcagattatagt
gtatttactcagcagccactggaggaagaaatggattcaaaatcttttgatgaaatggaa
cagagcttacttattctttctgaaacaaaggcttctctagtgagcaccatgagcctttgg
aaacaacagatgtatacaatagcaaagtttcatttctttaccttgaaacgtgaaagtaaa
tcagtgagatcagtgttgcttctgcttttaatttttttcacagttcagatttttatgttt
ttggtgcatcactcttttaaaaatgctgtggttcccatcaaacttgttccagacttatat
tttctaaaacctggagacaaacctcataaatacaaaacaagtctgcttcttcaaaattct
actgactcagatatcggtgatcttattagctttttcacaagccagaacataatggtgacg
atgattaatgacagtgactatgtatccatggctccccatagtgcggctttaaatgtgatg
cattcaggaaaggactatgtttttgcagctgttttcaacagtactatggtttattcttta
cctatattagtgaatatcattagtaactactatctttatcatttaaatgtgactgaaacc
atccagatctggagtaccccattctttcaagaaattaccgacatagtttttaaaattgag
ctgtattttcaagcggctttgcttggaatcattgttactgcaatgccaccttactttgcc
atggaaaatgcagagaatcataagatcaaagcttatactcaacttaaactttcaggtctt
ttgccatctgcatattggattggacaagctgttgttgatatccccttattttttatcatt
cttattttgatgctaggaagcttattggcatttcattatggattatatttttatactgta
aagttccttgctgtggttttttgccttattggttatgttccatcagttattctgttcact
tatattgcttctttcacctttaagaaaattttaaataccaaagaattttggtcatttatc
tattctgtgacagcgttggcttgtattgcaatcactgaaataactttctttatgggatac
acaattgcaactattcttcattatgccttttgtatcaccattccagtctatccacttcta
ggttgcctgatttctttcataaagatttcttggaagaatgtacgaaaaaatgcggacacc
tataatccgtgggataggctttcagtagctgttatattgccttacctgcagtgtgtactg
tggattttcctcttacaatactatgagaaaaaatatggaggcagatcaataagaaaagat
ccctttttcagaaacctttcaacaaagtccaaaaataggaagcttccagaaccaccaaac
aatgaagatgaagatgaagatgtcaaagctgaaagactaaaggtcaaagagctgatgagt
tgccagtgttgtgaggagaaaccatccattatggtcagcaatttgcataaagaatatgat
gacaagaaagattttctttcaagaaaagtaaagaaagtggcaactaaatacatctctttc
tgtgtgaaaaaaggagagatcttaggactgttgggtccaaatggtgctggcaaaagcaca
attattaatattctggttggtgatattgaaccaacttcaggccaggtatttttaggagat
tattcttcagagacaagtgaagatgatgattcactgaagtgtatgggttactgtcctcag
ataaaccctttgtggccagatactacattgcaggaacattttgaaatttatggagctgtc
aaaggaatgagtgcaagtgacatgaaagaagtcataagtcgaataacaaatgcacttgat
ttaaaagaacatcttcagaaaactgtaaagaaactacctgcaggaatcaaacgaaagttg
tgttttgctctaagtatgctagggaatcctcagattactttgctagatgaaccatctaca
ggtatggatcccaaagccaaacagcacatgtggcgagcaattcgaactgcatttaaaaac
aaaaagcgggctgctattctgaccactcactatatggaggaggcagaggctgtctgtgat
cgagtagctatcatggtgtctgggcagttaagatgtatcggaacagtacaacatctaaag
agtaaatttggaaaaggctactttttggaaattaaattgaaggactggatagaaaaccta
gaagtagaccgccttcaaagagaaattcagtatattttcccaaatgcaagccgtcaggaa
agtttttcttctattttggcttataaaattcctaaggaagatgttcagtccctttcacaa
tctttttttaagctggaagaagctaaacatgcttttgccattgaagaatatagcttttct
caagcaacattggaacaggtttttgtagaactcactaaagaacaagaggaggaagataat
agttgtggaactttaaacagcacactttggtgggaaagaacacaagaagatagagtagta
ttttga
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