Pongo pygmaeus (Bornean orangutan): 129017377
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Entry
129017377 CDS
T10128
Symbol
SOX9
Name
(RefSeq) transcription factor SOX-9
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04024
cAMP signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
129017377 (SOX9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppyg03000
]
129017377 (SOX9)
Transcription factors [BR:
ppyg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129017377 (SOX9)
SSDB
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GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
129017377
NCBI-ProteinID:
XP_054313862
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All DBs
Position
19:90310036..90315444
Genome browser
AA seq
509 aa
AA seq
DB search
MNLLDPFMKMTDEQEKGLSGAPSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKGEPDL
KKESEEDKFPVCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAAR
RKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRK
SVKNGQAEAEEATEQTHISPNAIFKALQADSPHSSSGMSEVHSPGEHSGQSQGPPTPPTT
PKTDVQPGKADLKREGRPLPEGGRQPPIDFRDVDIGELSSDVISNIETFDVNEFDQYLPP
NGHPGVPATHGQVTYTGSYGISSTAATPAGAGHVWMSKQQAPPPPPQQPPQAPPAPQAPP
QPQAAPPQQPAAPPQQPQAHTLTTLSSEPGQSQRTHIKTEQLSPSHYSEQQQHSPQQIAY
SPFNLPHYSPSYPPITRSQYDYTDHQNSSSYYSHAAGQGTGLYSTFTYMNPAQRPMYTPI
ADTSGVPSIPQTHSPQHWEQPVYTQLTRP
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctggaccccttcatgaagatgaccgacgagcaggagaagggcctgtccggc
gcccccagccccactatgtccgaggactccgcgggctcgccctgcccgtcgggctccggc
tcggacaccgagaacacgcggccccaggagaacacgttccccaagggcgagcccgacctg
aagaaggagagcgaggaggacaagttccccgtgtgcatccgcgaggcggtcagccaggtg
ctcaagggctacgactggacgctggtgcccatgccggtgcgcgtcaacggttccagcaag
aacaagccgcacgtcaagcggcccatgaacgccttcatggtgtgggcgcaggcggcgcgc
aggaagctcgcggaccagtacccgcacttgcacaacgccgagctcagcaagacgctgggc
aagctctggagacttctgaacgagagcgaaaagcggcccttcgtggaggaggcggagcgg
ctgcgcgtgcagcacaagaaggaccatccggattacaagtaccagccgcggcggaggaag
tcggtgaagaacgggcaggcggaggcagaggaggccacggagcagacgcacatctccccc
aacgccatcttcaaggcgctgcaggccgactcgcctcactcctcctccggcatgagcgag
gtgcactcccccggcgagcactcggggcaatcccagggcccaccgaccccacccaccacc
cccaaaaccgacgtgcagccgggcaaggctgacctgaagcgagaggggcgccccttgcca
gaggggggtagacagccccctatcgacttccgcgacgtggacatcggcgagctgagcagc
gacgtcatctccaacatcgagaccttcgacgtcaacgagtttgaccagtacctgccgccc
aacggccacccgggggtgccggccacgcacggccaggtcacctacacgggcagctacggc
atcagcagcaccgcggccaccccggcgggcgcgggccacgtgtggatgtccaagcagcag
gcgccgccgccacccccacagcagcccccacaggccccgccggccccgcaggcgcccccg
cagccgcaggcggcgcccccgcagcagccggccgcacccccgcagcagccacaggcgcac
acgctgaccacgctgagcagcgagccgggccagtcccagcgaacacacatcaagacggag
cagctgagccccagccactacagcgagcagcagcagcactcgccccagcagatcgcctac
agccccttcaacctcccacactacagcccctcctacccgcccatcacccgctcacagtac
gactacaccgaccaccagaactccagctcctactacagccacgcggcgggccagggcacc
ggcctctactccaccttcacctacatgaaccccgcccagcgccccatgtacacccccatc
gccgacacctctggggtcccttccatcccgcagacccacagcccccagcactgggaacaa
cccgtctacacacagctcactcgaccttga
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