Pongo pygmaeus (Bornean orangutan): 129017638
Help
Entry
129017638 CDS
T10128
Symbol
ABCA6
Name
(RefSeq) ATP-binding cassette sub-family A member 6 isoform X1
KO
K05649
ATP-binding cassette, subfamily A (ABC1), member 6
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129017638 (ABCA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppyg02000
]
129017638 (ABCA6)
Transporters [BR:
ppyg02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
129017638 (ABCA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_15
nSTAND1
AAA_29
AAA_22
AAA_23
Motif
Other DBs
NCBI-GeneID:
129017638
NCBI-ProteinID:
XP_054314220
LinkDB
All DBs
Position
19:complement(87234477..87312966)
Genome browser
AA seq
1617 aa
AA seq
DB search
MNMKQKSVYQQTKALLCKNFLKKWRMKRESLLEWGLSILLGLCIALFSSSMRNVQFPGMA
PQNLGRVDKFNSSSLMVVYTPISNLTQQIMNKTALAPLLKGTSVIGAPNKTHMDEILLEN
LPYAMGIIFNETFSYKLIFFQGYNSPLWKEDFSAHCWDGYGEFSCTLTKYWNRGFVALQT
AINTAIIEITTNHPVMEELMSVTAITMKTLPFITKNLLHNEMFILFFLLHFSPLVYFISL
NVTKERKKSKNLMKMMGLQDSAFWLSWGLIYAGFIFIISIFITIIVTFTQIIVMTGFMVI
FILFFLYGLSLVALVFLMSVLLKKAVLTNLVVFLLTLFWGCLGFTVFYEQLPSSLEWILN
ICSPFAFTAGMIQIIKLDYNLNGVIFPDPSGDSYTMIATFSMLLLDGLIYLLLALYFDKI
LPYGNERHYSPLFFLNSSSCFQHQRTNTKVIEKEIDAEHLSDDYFEPVAPEFQGKEAIRI
RNVKKEYKGKSGRVEALKGLLFDIYEGQITAILGHSGAGKSSLLNILNGLSVPTEGSVTI
RNKNLSEMQDLEEIRKITGVCPQFNVQFDILTVKENLSLFAKIKGIHPKEMEQQVQRILL
ELDMQNIQDNLAKHLSEGQKRKLTFGIAILGDPQILLLDEPTTGLDPFSRDQVWSLLRER
RADHVILFSTQSMDEADILADRKVIMSNGRLKCAGSSIFLKRRWGLGYHLSLHRNEICNP
EQITSFITHHIPDAKLKTENKEKLVYTLPLERTNTFPDLFSDLDKCSDQGVTGYDISMST
LNEVFMKLEGQSTIEQDFEQVEMIRDSESLNEMELAHSSFSEMQTAVSDMGLWRMQVFAM
ARLRFLKLKRQTKVLLTLLLVFGIAMFPLIVENIMYAMLNEKIDWEFKTELYFLSPGQLP
QEPRTSLLIINNTESNIEDFIKSLKHQNILLEVDDFENRNGTDGLSYNGAIIVSGKQKDY
RFSVVCNTKRLHCFPILMNIISNGLLRMFNHTQHIRIESSPFPLSHIGLWTGLPDGSFFL
FLVLCSISPYITMGSISDYKKNAKSQLWISGLYTSAYWCGQALVDVSFFILILLLMYLIF
YIENMQYLLITSQIVFALVIVTPGYAASLVFFIYMISFIFRKRRKNSGLWSFYFFFASTI
MFSITLINHFDLSILITTMVLVPSYTLLGSKTFLEVRDQEHYREFPEANFELSATDFLVC
FIPYFQTLLFVFVLRCMELKYGKKRMRKDPVFRISPQSRDAKPNPEEPVDEDEDVQAERI
RTATALTTSVLDEKPVIIASCLHKEYAGQKKSCFSKRKKKIAARNISFCVQEGEILGLLG
PNGAGKSSSIRMISGITKPTAGEVELKGHSSVLGHLGYCPQENVLWPMLTLREHLEVYAA
VKGLRKADARLAITRLVSAFKLREQLNVPVQKLTAGTMRKLCFVLSLLGNSPVLLLDEPS
TGIDPTGQQQMWQAIQAVVKNTERGVLLTTHNLAEAEALCDRVAIMVSGRLRCIGSIQHL
KNKLGKDYILELKVKEPSQVTLVHTEILKLFPQAAGQERYSSLLTYKLPMADVYPLSQTF
HKLEAVKHNFNLEEYSLSQCTLEKVFLELSKEQEVGNFDEEIDTTMRWKLLPHSDEP
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgaaacagaaaagcgtgtatcagcaaaccaaagcacttctgtgcaagaatttt
cttaagaaatggaggatgaaaagagagagcctattggaatggggcctctcaatacttcta
ggactgtgtattgctctgttctccagttccatgagaaatgtccagtttcctggaatggct
cctcagaatctgggaagggtggataaatttaatagctcttctttaatggttgtgtataca
ccaatatctaatttaacccagcagataatgaataaaacagcacttgctcctcttttaaaa
ggaacaagtgtcattggggcaccaaataaaacacatatggacgaaatacttctggaaaat
ttaccatatgctatgggaatcatctttaatgaaactttctcttataagttaatatttttc
cagggatataacagtccactttggaaagaagatttctcagctcattgctgggatggatat
ggtgagttttcatgtacattgaccaaatactggaatagaggatttgtggctttacaaaca
gctattaatactgccattatagaaatcacaaccaatcaccctgtgatggaggagttgatg
tcagttactgctataactatgaagacattacctttcataactaaaaatcttcttcacaat
gagatgtttattttattcttcttgcttcatttctccccacttgtatattttatatcgctc
aatgtaacaaaagagagaaaaaagtctaagaatttgatgaaaatgatgggtctccaagat
tcagcattctggctctcctggggtctaatctatgctggcttcatctttattatttccata
ttcattacaattatcgtaacattcacccaaattatagtcatgactggcttcatggtcata
tttatactcttttttttatatggcttatctttggtagctttggtgttcctgatgagtgtg
ttgttaaagaaagctgtcctcaccaatttggttgtgtttctccttaccctcttttgggga
tgtctgggattcactgttttttatgaacaacttccttcatctctggagtggattttgaat
atttgtagcccttttgcctttactgctggaatgattcagattatcaaactggattataac
ttgaatggtgtaatttttcctgacccttcaggagactcatatacaatgatagcaactttt
tctatgttgcttttggatggtctcatctacttgctattggcattatactttgacaaaatt
ttaccctatggaaatgagcgccattattctcctttatttttcttgaattcatcatcttgt
ttccaacaccaaaggactaatactaaggttattgagaaagaaatcgatgctgagcatctc
tctgatgattattttgaaccagtagctcctgaattccaaggaaaagaagccatcagaatc
agaaatgttaagaaggaatataaaggaaagtctggaagagtggaagcattgaaaggcttg
ctctttgacatatatgaaggtcaaatcacggcaatcctgggtcacagtggagctggcaaa
tcttcactgctaaatattcttaatggattgtctgttccaacagaaggatcagttaccatc
cgtaataaaaatctctctgaaatgcaagacttggaggaaatcagaaagataaccggcgtc
tgtcctcaattcaatgttcagtttgacatactcaccgtgaaggaaaacctcagcctgttt
gctaaaataaaagggattcatccaaaggaaatggaacaacaggtacaacgaatattattg
gaattggacatgcaaaacattcaagataaccttgctaaacatttaagtgaaggacagaaa
agaaagctgacttttgggattgccattttaggagatcctcaaattttgctcttagatgaa
ccaactactggattggatcccttttccagagatcaagtgtggagcctcctgagagagcgt
agagcagatcatgtgatccttttcagtacccagtccatggatgaggctgacatcctggct
gatagaaaagtgatcatgtccaatgggagactgaagtgtgcaggttcttctatctttttg
aaaagaaggtggggtcttggatatcacctaagtttacataggaatgaaatatgtaatcca
gaacaaataacatccttcattactcatcatatccctgatgctaaattaaaaacagaaaac
aaagaaaagcttgtatatactttgccactggaaaggacaaatacatttccagatcttttc
agtgatctggacaagtgttctgaccagggagtgacaggttatgacatttccatgtcaact
ctaaatgaagtctttatgaaactggaaggacagtcaactattgaacaagatttcgaacaa
gtggagatgataagagactcagaaagcctcaatgaaatggagctggctcactcttccttc
tctgaaatgcagacagctgtgagtgacatgggcctctggagaatgcaagtctttgccatg
gcacggctccgtttcttaaagttaaaacgccagacaaaagtgttattgaccctattattg
gtatttggaatcgcaatgttccctttgattgtcgaaaatataatgtatgctatgttaaat
gaaaagatcgattgggaatttaaaaccgaattatattttctctctcccggacaacttcct
caggaaccccgtaccagcctgttgatcatcaataacacagaatcaaatattgaagatttt
ataaaatcactgaagcatcaaaatatacttttggaagtagatgactttgaaaacagaaat
ggtactgatggcctctcatacaatggagctatcatagtttctggtaaacaaaaggattat
agattttcagttgtgtgtaataccaagagattgcactgttttccgattcttatgaatatt
atcagcaatgggctacttcgaatgtttaatcacacacaacatattcgaattgagtcaagc
ccatttcctcttagccacataggactctggactgggctgccggatggttcctttttctta
tttttggttctatgtagcatttctccttatatcaccatgggcagcatcagtgattacaag
aaaaatgctaagtcccagctatggatttcgggcctctacacttctgcttactggtgtggg
caggcactagtggacgtcagcttcttcattttaattctccttttaatgtatttaattttc
tacatagaaaacatgcagtaccttcttattacaagccaaattgtgtttgctttggttata
gttactcctggttatgcagcttctcttgtcttcttcatatatatgatatcatttattttt
cgcaaaaggagaaaaaacagtggcctttggtcattttacttcttttttgcctccaccatc
atgttttccatcactttaatcaatcattttgacctaagtatattgattaccaccatggta
ttggttccttcatataccttgcttggatctaaaacatttttggaagtgagagaccaggag
cactacagagaatttccagaggcaaattttgaattgagtgccactgattttctagtctgc
ttcataccctactttcagactttgctattcgtttttgttctaagatgcatggaactaaaa
tatggaaagaaaagaatgcgaaaagatcctgttttcagaatttccccccaaagtagagat
gctaaaccaaatccagaagaacccgtagatgaagatgaagatgttcaagcagaaagaata
agaacagcaactgctctcaccacttcagtcttagatgagaaacctgttataattgccagc
tgtctacacaaagaatatgcaggccagaagaaaagttgcttttcaaagaggaagaagaaa
atagcagcaagaaatatctctttctgtgttcaagaaggtgaaattttgggattgttagga
cccaatggtgctggaaaaagttcatctattagaatgatatctgggatcacaaagccaact
gctggagaggtggaactgaaaggccacagttcagttttgggccacctggggtactgccct
caggagaacgtgctgtggcccatgctgacgttgagggagcacctggaggtgtatgctgcc
gtcaaggggctcaggaaagcggacgcgaggctcgccatcacaagattagtgagtgctttc
aaactgcgtgagcagttgaatgttcctgtgcagaaattaacagcaggaaccatgagaaag
ttgtgttttgtgctgagcctcctgggaaactcacctgtcttgctcctggatgaaccatct
acaggcatagaccccacagggcagcagcaaatgtggcaggcaatccaggcagtcgttaaa
aacacagaaagaggtgtcctcctgaccacccataacctggctgaggcagaggccttgtgt
gaccgtgtggccatcatggtgtctggaaggcttagatgcattggctccatccaacacctg
aaaaacaaacttggcaaggattacattctagagctaaaagtgaaggaaccttctcaagtg
actttggtccacactgagattctgaagcttttcccacaggctgcagggcaggaaaggtat
tcctccttgttaacctataagctgcccatggcagacgtttaccctctatcacagaccttt
cacaaattagaggcagtgaagcataactttaacctggaagaatacagcctttctcagtgc
acattggagaaggtattcttagagctttctaaagaacaggaagtaggaaattttgatgaa
gaaattgatacaacaatgagatggaaactcctccctcattcagatgaaccttaa
DBGET
integrated database retrieval system
