Pongo pygmaeus (Bornean orangutan): 129018047
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Entry
129018047 CDS
T10128
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppyg03000
]
129018047 (RAI1)
Transcription factors [BR:
ppyg03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
129018047 (RAI1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
129018047
NCBI-ProteinID:
XP_054315166
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All DBs
Position
19:complement(18416847..18547835)
Genome browser
AA seq
1913 aa
AA seq
DB search
MQSFRERCGFHGKQQNYQQTSQETSRLENYRQPSQAGLSCDRQRLLAKDYYNPQPYPSYE
GGAGTPSGTAAAVAADKYHRGSKALPTQQALQGRPAFPGYGVQDSSPYPGRYAGEESLQA
WGAPQPPPPQPQPLPAGVAKYDENLMKKTAVPPSRQYAEQGAQVPFRTHSLHVQQPPPPQ
QPLAYPKLQRQKLQNDIASPLPFPQGTHFPQHSQSFPTSSTYSSSVQGGGQGAHSYKSCT
APTAQPHDRPLTASSSLAPGQRVQNLHAYQSGRLSYDHHQQQQQQQQQQPQPQQQQALQS
RHHAQETLHYQNLAKYQHYGQQGQGYCQPDTAVRTPEQYYQTFSPSSSHSPARSVGRSPS
YSSTPSPLMPNLENFPYSQQPLSTGAFPAGITDHSHFMPLLNPSPTDATSSVDTQAGNCK
PLQKDKLPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKAAVPQKKGVKNLVSRTPEQ
HKSQHCSPEGSGYSAEPAGTPLSEPLSSTPQSTHAEPQEADYLSGSEDPLERSFLYCNQA
RGSPARVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSLHSSLPLDSFSKFVAGERDCP
RLLLSALAQEDLASEILGLQEAIGEKADKAWAEAPSLVKDSSKPPFSLENHSACLDSVAK
TAWARPGEPEALPDSLQLDKGGNAKDFSPGLFEDPSVAFATPDPKKTTGPLSFGTKPTLG
APAPDPTTAAFDCFPDTTAASSADSANPFAWPEENLGDACPRWGLHPGELTKGLEQGGKA
SDGISKGDTHEASACLGFQEEDPPGEKVASLPGDFKQEEVGGVKEEAGGLLQCPEVAKAD
RWLEDSRHCCSTADFGDLPLLPPTSRKEDLEAEEEYSSLCELLGSPEQRPGMQDPLSPKA
PLICTKEEVEEVLDSKAGWGSPCHLSGESVILLGPTVGTESKVQSWFESSLSHMKPGEEG
PDGERAPGDSTTSDTSLAQKPNKPAVPEAPIAKKEPVPRGKSLRSRRVHRGLPEAEDSPC
RAPALPKDLLLPESCTGPPQGQMEGAGAPGRGASEGLPRMCTRSLTALSEPRTPGPPGLT
TTPAPPDKLGGKQRAAFKSGKRVGKPSPKAASSPSNPAALPVASDSSPMGSKTKETDSPS
TPGKDQRSMILRSRTKTQEIFHSKRRRPSEGRLPNCRATKKLLDNSHLPATFKVSSSPQK
EGRVSQRARVPKPGAGSKLSDRPLHALKRKSAFMAPVPTKKRNLVLRSRSSSSSNASGNG
GDGKEERPEGSPTLFKRMSSPKKAKPTKGNGEPATKPPPPETPDACLKLASRAAFQGAMK
TKVLPPRKGRGLKLEAIVQKITSPSLKKFACKAPGASPGNPLSPSLPDKDRGLKGAGSSP
VGVEEGLVSVGTGQKLPASSGADPLCRNPTNRSLKGKLMNSKKLSSTDCFKTEAFTSPEA
LQPGGTALAPKKRSRKGRAGALGLSKGPLEKRPYLGPALLLTPRDRASGTQGASEDNSGG
GGKKPKMEELGLASQPPEGRPCQPQTRAQKQPGHTNYSSYSKRKRLTRGRAKNTTSSPCK
GRAKRRRQQQVLPLDPAEPEIRLKYISSCKRLRSDSRTPAFSPFVRVEKRDAFTTICTVV
NSPGDAPKPHRKPSSSASSSSSSSSFSLDAAGASLATLPGGSILQPRPSLPLSSTMHLGP
VVSKALSTSCLVCCLCQNPANFKDLGDLCGPYYPEHCLPKKKPKLKEKVRPEGTCEEASL
PLERTLKGPECAAAAAAGKPPRPDGPADPAKQGPLRTSARGLSRRLQSCYCCDGREDGGE
EAAPADKGRKHECSKEAPAEPGGEAQEHWVHEACAVWTSGVYLVAGKLFGLQEAMKVAVD
MTCSSCQEAGATIGCCHKGCIHTYHYPCASDAGCIFIEENFSLKCPKHKRLPL
NT seq
5742 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacaacagaactaccagcagacc
tcgcaggaaacatcacgcctggagaattacaggcagccgagtcaggccgggctaagctgc
gaccggcagcggctgctcgccaaggactattataacccgcagccttacccaagctatgag
ggtggcgctggcacgccctctggcactgcggccgcggtggccgccgacaagtaccaccga
ggcagcaaggccctgcccacacagcaagccctgcaggggaggccggctttccctggctac
ggcgtccaggacagcagcccctacccaggccgctatgctggtgaggagagccttcaggct
tggggggccccgcagccaccgcccccacaaccacagccactaccggcgggggtggccaag
tatgatgagaacttgatgaaaaagacagcagtgccccccagcaggcagtatgcagagcag
ggcgcccaggtgccctttcggactcactccctgcatgtccagcagccaccgccgccccag
cagcccctggcataccccaagctccaaaggcagaagctgcagaacgacattgcctcccct
ctgcccttcccccagggtacccactttcctcagcattcccagtccttccccacctcctcc
acctactcctcctccgtccaaggtggtgggcagggggcccactcctataagagttgcacg
gcgccgactgcccagccccatgacaggccgctgactgccagctccagcctggcccctggg
cagcgggtccagaatcttcatgcctatcagtcgggccgcctcagctatgaccaccaccag
cagcagcagcagcagcagcagcagcagccgcagccgcagcagcagcaagcccttcagagc
cggcaccatgcccaggaaaccctccattaccaaaacctcgccaagtatcagcactacggg
cagcaaggccagggctactgccagccagacacagccgtccggaccccagagcagtactac
cagaccttcagccccagctccagccactcacccgcccgctccgtgggccgctcgccttcc
tacagctccacaccgtcgccgctgatgccaaacctggagaactttccctacagccagcag
ccgctcagcaccggggccttccccgcagggatcactgaccacagccacttcatgcccctg
ctcaatccctccccaacggatgccactagctctgtggacacccaggctggcaactgcaag
ccccttcagaaggacaagctccccgagaacctgctgtcggatctcagcctgcagagcctc
acggcgctgacctcacaggtggagaacatctccaacaccgtccagcagctgctgctctcc
aaggctgctgtgccgcaaaagaaaggcgtcaagaaccttgtgtccaggaccccagagcag
cacaaaagccagcactgcagccctgaagggagcggctactcagccgagcccgcaggcaca
ccactgtcagagccgctgagcagcacgccacagtccacgcatgcggagccacaggaggcc
gactacctgagcggctccgaggacccactggagcgcagcttcctctactgcaaccaggcc
cgtggcagccctgccagggtcaacagcaactcgaaggccaagcccgagtctgtgtccacc
tgttctgtaacgtctcctgacgacatgtccaccaaatctgacgactccttccagagcctg
cacagcagtctgccgctcgacagcttctccaagttcgtggcgggtgagcgggactgtccg
cggctgctgctcagtgccctggcacaggaggacctggcctctgagatcctggggctgcag
gaagccatcggtgagaaggccgacaaagcttgggccgaagcacccagcctggtcaaggac
agcagcaagccacccttctcgctggagaaccacagcgcttgcctggactctgtggccaag
actgcgtgggcccggcctggggagccagaggccctgcccgactccttgcagctggacaag
ggcggcaatgccaaggacttcagcccagggctgtttgaagacccttccgtggctttcgct
acccctgaccccaaaaagacaactggtcctctctcctttggcaccaagcccacccttggg
gctcctgctccagaccccactacagcagcttttgactgtttcccggacacgaccgctgcc
agctcagcggacagtgccaacccctttgcctggccagaggaaaacctgggggatgcttgt
cccagatggggattgcaccctggcgagctcaccaagggcctggagcagggtgggaaggcc
tcagatggcatcagcaaaggggacacccatgaggcttcggcctgcctgggcttccaggag
gaggacccccctggggagaaggtggcctcgttgcccggggacttcaagcaggaggaggtg
ggtggggtgaaggaggaggcaggcgggctgctgcagtgccctgaggtggccaaagctgac
cggtggctggaggacagccggcactgctgttccaccgccgacttcggggacctcccactg
ctgccacccaccagcaggaaggaggacctggaagctgaggaggagtactcctccctatgt
gagctcctgggcagccccgagcagaggcccggcatgcaggacccactgtcacccaaggcc
ccactcatctgcaccaaggaggaagtggaggaggtgctggactccaaggctggctggggc
tctccatgccacctctcaggggagtccgtcatcctgctgggccctacagtgggcaccgag
tcaaaggtccagagctggtttgagtcctctctgtcccacatgaagccaggtgaagagggg
cctgatggggagcgagctccaggggattccaccacctcggacacctctctggcccagaag
cccaacaagcctgctgtgcccgaggcgcccattgcgaagaaagagcctgtgccacggggc
aaaagcttacggagccgtcgggtgcaccgggggctgcccgaggccgaggactccccatgc
agggcaccagcgctgcccaaagacctcttgctccctgaatcctgcacagggcccccacag
ggacagatggaaggggctggagccccaggccggggggcctcggaagggctccccaggatg
tgtactcgttctctcacggccctgagtgagccccgcacgcccgggcccccaggcctgacc
accacccctgcacccccagacaaactggggggcaagcagcgagccgccttcaagtcgggc
aagcgggtggggaagccctcacccaaggctgcctccagccccagcaacccggccgccctg
cctgtggcctccgacagcagcccgatgggctccaagaccaaggagacagactcgcccagc
acgcctggcaaggaccagcgctccatgatccttcggtcacgcaccaaaacccaggagatc
ttccactccaagcggcggaggccctctgagggccggctccccaactgccgtgccaccaag
aagctcctcgacaacagccacttgcccgccacgttcaaggtctccagcagcccccagaag
gagggcagggtgagccagcgggcaagggtccccaaacctggtgcaggcagcaagctctct
gaccggcccctccacgcactcaaaaggaagtcggccttcatggcgccggtccccaccaag
aagcggaacctggtcctgcggagccgcagcagcagcagcagcaacgccagtggcaatggg
ggagatgggaaggaggagaggcccgagggttcccccaccctcttcaagaggatgtcttct
cccaagaaagccaagcccaccaagggcaacggcgagcccgccacaaagcccccacccccg
gagacccccgatgcctgcctcaagctcgcctctcgggcagccttccagggggccatgaag
accaaggtgctgccaccccggaagggccggggcctaaagctggaagccatcgtgcagaag
atcacctcgcccagcctcaagaagttcgcatgtaaagcgccaggggcctctcctggtaat
cctctgagcccatcgcttcccgacaaagaccgtgggctcaagggtgctgggagcagccca
gtgggggtggaagaaggcctggtaagtgtgggcaccgggcagaagctcccagcttcttct
ggggctgatccgttatgcagaaatccaaccaacagatccttaaaaggcaaactcatgaac
agtaagaaactgtcttcgaccgactgtttcaaaaccgaggccttcacatccccggaggcc
ctgcagcccggggggactgccctggcacctaagaagaggagccggaaaggccgggcaggg
gcccttggactctccaaaggcccgctggagaagcggccctatcttggcccggctctgctc
ctgactccccgagacagggccagtggcacacaaggggccagcgaggacaactctggtgga
ggaggcaagaagccaaagatggaggagctgggcctggcctcccagcccccggagggcagg
ccctgccagccccagacaagggcacagaaacagccaggccacaccaactacagcagctat
tccaagcggaagcgcctcactcggggccgggccaagaacaccacctcttcaccctgtaag
gggcgtgccaagcgacgacggcagcagcaggtgctgcccctggatcctgcagagcctgaa
atccgcctcaagtacatttcctcttgcaagcggctgaggtcagacagccggacccccgcc
ttctcaccctttgtgcgggtggagaagcgagatgcattcaccaccatatgcactgttgtc
aactcccctggagatgcgcccaagccccacaggaagccttcctcctctgcctcctcttcc
tcatcctcatcctcgttctccttggatgcagccggggcctccctggccacactccctgga
ggctccatcctgcagccgcggccctccttgcccctctcctccacgatgcacttggggcct
gtggtttccaaggccctgagtacctcttgccttgtttgctgcctctgccaaaacccggcc
aacttcaaggaccttggggacctctgtgggccctactaccctgaacactgcctccccaaa
aagaagccaaaactcaaggagaaggtgcggccagaaggcacctgtgaggaggcctcgctg
ccgcttgagagaacactcaaaggtcccgagtgtgcagctgccgccgctgccgggaagccc
cccaggcctgacggcccagctgacccggccaagcagggcccactgcgcaccagtgcccgg
ggcctgtcccggaggctgcagagctgctactgctgtgatggccgggaggatgggggcgag
gaggcagccccagccgacaagggtcgcaaacatgagtgcagcaaggaggccccagcagag
cccggcggggaggcccaggagcactgggtgcacgaggcctgtgccgtgtggaccagcggc
gtctacctggtggccgggaagctctttgggctgcaggaggccatgaaggtggccgtggac
atgacgtgttccagctgccaggaagccggggccaccattgggtgctgccacaaaggatgc
atccacacctaccactacccgtgtgccagcgatgcaggttgcatattcatcgaagagaac
ttttctttgaaatgtcccaaacataagaggctgccgttgtaa
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