Pongo pygmaeus (Bornean orangutan): 129018731
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Entry
129018731 CDS
T10128
Symbol
SS18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03082
ATP-dependent chromatin remodeling
ppyg05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129018731 (SS18)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
129018731 (SS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppyg03036
]
129018731 (SS18)
Chromosome and associated proteins [BR:
ppyg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129018731 (SS18)
GBAF(ncBAF) complex
129018731 (SS18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
129018731
NCBI-ProteinID:
XP_054316494
LinkDB
All DBs
Position
17:complement(40470076..40545136)
Genome browser
AA seq
531 aa
AA seq
DB search
MGRCSGCGARAPGGGRAGKGVCRTGGPARCPGVTLASPRPARPGCFVRTPPRVSAGGGEV
GSLVAALQTQPSLGALTRAWGTLEGTLVEFEERAGKVPMDSGVIPRASSSLLHRRLFIYS
AANIYRAPILGAEATVMLDDNNHLIQCIMDSQNKGKTSECSQYQQMLHTNLVYLATIADS
NQNMQSLLPAPPTQNMPMGPGGMNQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQM
PGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPM
GNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQ
RQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPE
QGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGP
SQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggggcggtgttcgggctgcggggcgcgtgcgcccggcggcggccgcgcagggaagggc
gtgtgtcggaccggcggccccgcgcgttgccccggagttactttggcgtcgccccgcccc
gcgcgccccggctgcttcgtgcggaccccaccgcgggtctcggcaggcggaggggaagtc
ggatcgctggtcgccgccctgcaaactcagccgagtttgggagcactcacgagggcttgg
ggaacgctggagggaaccttagtagagtttgaggagcgggcagggaaggtccccatggac
tctggggttatccccagagcctcttcttcccttctgcatcgccgcctattcatttattct
gcagcaaatatttatcgagcgcctattttaggcgctgaggctactgtgatgttggatgac
aataaccatcttattcagtgtataatggactctcagaataaaggaaagacctcagagtgt
tctcagtatcagcagatgttgcacacaaacttggtataccttgctacaatagcagattct
aatcaaaatatgcagtctcttttaccagcaccacccacacagaatatgcctatgggtcct
ggagggatgaatcagagcggccctccccctcctccacgctctcacaacatgccttcggat
ggaatggtaggtgggggtcctcctgcaccacacatgcagaaccagatgaacggccagatg
cctgggcctaaccatatgcctatgcagggacctggacccaatcaactcaatatgacaaac
agttccatgaatatgccttcaagtagccatggatccatgggaggttataaccattctgtg
ccatcatcacagagcatgccagtacagaatcagatgacaatgagtcagggacaaccaatg
ggaaactatggtcccagaccaaatatgaatatgcagccaaaccaaggtccaatgatgcat
cagcagcctccttctcagcaatacaatatgccacagggaggcggacagcattaccaagga
cagcagccacctatgggaatgatgggtcaagttaaccaaggcaatcatatgatgggtcag
agacagattcctccctatagacctcctcaacagggcccaccacagcagtactcaggccag
gaagactattacggggaccaatacagtcatggtggacaaggtcctccagaaggcatgaac
cagcaatattaccctgatggtcataatgattacggttatcagcaaccgtcgtatcctgaa
caaggctacgataggccttatgaggattcctcacaacattactacgaaggaggaaattcg
cagtacggccaacagcaagatgcataccagggaccacctccacaacagggatatccaccc
cagcagcagcagtacccagggcagcaaggttacccaggacagcagcagggctacggtcct
tcacagggtggtccaggtcctcagtatcctaactacccacagggacaaggtcagcagtat
ggaggatatagaccaacacagcctggaccaccacagccaccccagcagaggccttatgga
tatgaccagggacagtatggaaattaccagcagtga
DBGET
integrated database retrieval system
