Pongo pygmaeus (Bornean orangutan): 129018932
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Entry
129018932 CDS
T10128
Symbol
RBBP8
Name
(RefSeq) DNA endonuclease RBBP8 isoform X1
KO
K20773
DNA endonuclease RBBP8 [EC:3.1.-.-]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129018932 (RBBP8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppyg03400
]
129018932 (RBBP8)
DNA repair and recombination proteins [BR:
ppyg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-C complex
129018932 (RBBP8)
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Gene cluster
GFIT
Motif
Pfam:
CtIP_N
SAE2
Motif
Other DBs
NCBI-GeneID:
129018932
NCBI-ProteinID:
XP_054316995
UniProt:
E5FGG8
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Position
17:37302686..37394593
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AA seq
895 aa
AA seq
DB search
MNISGSSCGSPNSADISSDFKDLWTKLKECHDREVQGLQVKVTKLKQERILDAQRLEEFF
TKNQQLREQQKVLHETIKVLEDRLRAGLCDRCAVTEEHMRKKQQEFENIRQQNLKLITEL
MNERNTLQEENKKLSEQLQQKIENDQQHQAAELEREEDVIPDSPITDFSFSGINRLRRKE
NPHVRYMEQTHTKLERSVCANELRKVSKSSTHPQHNPNENEILVADTYDQSQSPMAKTHG
TSSYTPDKSSFNLATVVAETLGLGVQEESETQGPMSPLGDELYHCLEGDHKKQPFEESTR
NTEDSLRFSDSTSKTPPQEELPTRVSSPVFGAMSSIKSGLDLNTSLSPSLLQPGKKKHLK
TLPFSNTCISRLEKTRSKSEDSALFTHHSLGSEVNKIIIQSSNKQILKNISESLGEQNRT
EYVKDSNTDKHLEPLKSLGGRTSKRKKTEEESEHEVSCPQASFDKENAFPFPMDNQFSMN
GDCVMDKPLDLSDRFSAIQRQEKSQGSETSKNRFRQVTLYEALKTIPKGFSSSRKASDGN
CTLPKDSPGEPCLQECIILQPLSKCSPDNKPSLQIKEENAVVKIPLRPRESLETENVLDD
IKDAGSHEPIKIQTRSVRGGCELASVLQLNPCRTGKIKSLQNNQDVSFENIQWSIDPGAD
LSQYKMDVTVIDTKDGSQSKLGGETVDMDCTLVSETVLLKMKKQEQKGEKSSNEERKMND
SLEDMFDRTTHEEYESCLADSFSQAADEEEELSAATKKLHTHGDKQDKVKQKAFVEPYFK
DDERETSLQNFPHIEVVRKKEERRKLLGHTCKECEIYYADMPAEEREKKLASCSRHRFRY
IPPNTPENFWEVGFPSTQTCMERGYIKEDLDPCPRPKRRQPYNAIFSPKGKEQKT
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgaacatctcgggaagcagttgtggaagccctaactctgcagatatatctagtgacttt
aaggacctttggacaaaactaaaagagtgtcatgatagagaagtacaaggtttacaagta
aaagtaaccaagctaaaacaggaacgaatcttagatgcacaaagactagaagaattcttc
accaaaaatcaacagctgagggaacagcagaaagtccttcatgaaaccattaaagtttta
gaagatcggttaagagcaggattatgtgatcgctgtgcagtaactgaagaacatatgcgg
aaaaaacagcaagaatttgaaaatatccggcagcagaatcttaaacttattactgaactt
atgaatgaaaggaatactctacaggaagaaaataaaaagctttctgaacaactccagcag
aaaattgagaatgatcaacagcatcaagcagccgagcttgaacgtgaggaagacgttatt
ccagattcaccgataacagacttctcattttctggcattaaccggctacgaagaaaggag
aacccccatgtccggtacatggaacaaacacatactaaattggagcgctctgtgtgtgca
aatgaattgagaaaagtttccaagtcttcaactcatccacaacataatcctaatgagaat
gaaattctagtagctgacacttatgaccaaagtcaatctccaatggccaaaacacatgga
acaagcagctatactcctgataagtcatcttttaatttagctacagttgttgctgaaaca
cttggacttggtgttcaggaagaatctgaaactcaaggtcccatgagcccccttggtgat
gagctctaccactgtctggaaggagatcacaagaaacagccttttgaggaatctacaaga
aatactgaagatagtttaagattttcagattctacttcaaagactcctcctcaagaagaa
ttacctactcgagtgtcatctcctgtatttggagctatgtctagtatcaaaagtggttta
gatttgaatacaagtttgtccccttctcttttacagcctgggaaaaaaaaacatctgaaa
acactcccttttagcaacacttgtatatctagattagaaaaaactagatcaaaatctgaa
gatagtgcccttttcacacatcatagtcttgggtctgaagtgaacaagatcattatccag
tcatctaataaacagatacttaaaaatataagtgaatccctaggtgaacagaataggact
gagtacgttaaagattctaacactgataaacatttggagcccctgaaatcattgggaggc
cgaacatccaaaaggaagaaaactgaggaagaaagtgaacatgaagtaagctgcccccaa
gcttcttttgataaagaaaatgctttcccttttccaatggataatcagttttccatgaat
ggagactgtgtgatggataaacctctggatctgtctgatcgattttcagctattcagcgt
caagagaaaagccaaggaagtgagacttctaaaaacagatttaggcaagtgactctttat
gaggctttgaagaccattccaaagggcttttcctcaagccgtaaggcctcggatggcaac
tgcacgttgcccaaagattccccaggggagccctgtttacaggaatgcatcatccttcag
cccttgagtaaatgctctccagacaataaaccatcattacagataaaagaagaaaatgct
gtcgttaaaattcctctacgtccacgtgaaagtttggagactgagaatgttttagatgac
ataaaggatgctggttctcatgagccaataaaaatacaaaccaggtcagtccgtggagga
tgtgaactcgcatcagttcttcagttaaatccatgtagaactggtaaaataaagtctcta
caaaacaaccaagatgtatcctttgaaaatatccagtggagtatagatccgggagcagac
ctttctcagtataaaatggatgttactgtaatagatacaaaggatggcagtcagtcaaaa
ttaggaggagagacagtggacatggactgtacgttggttagtgaaaccgttctcttaaaa
atgaagaagcaagagcagaagggagaaaaaagttcaaatgaagaaagaaaaatgaatgat
agcttggaagatatgtttgatcggacaacacatgaagagtatgaatcctgtttggcagac
agtttctcccaagcagcagatgaagaggaggaattgtctgctgccacaaagaaactacac
actcatggtgataaacaagacaaagtcaagcagaaagcatttgtggagccatattttaaa
gatgatgaaagagagactagcttgcaaaattttcctcatattgaggtggttcggaaaaaa
gaggagagaagaaaactgcttgggcacacgtgtaaggaatgtgaaatctattatgcagat
atgccagcagaagaaagagaaaagaagttggcttcctgctcaagacaccgattccgttac
attccacccaacacaccagagaatttttgggaagttggttttccttccactcagacttgt
atggaaagaggttatattaaggaagatcttgatccttgtcctcgtccaaaaagacgtcag
ccttacaacgcaatattttctccaaaaggcaaggagcagaagacatag
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