Pongo pygmaeus (Bornean orangutan): 129019338
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Entry
129019338 CDS
T10128
Symbol
RFX1
Name
(RefSeq) MHC class II regulatory factor RFX1 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppyg03000
]
129019338 (RFX1)
Transcription factors [BR:
ppyg03000
]
Eukaryotic type
Other basic domains
RF-X
129019338 (RFX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
129019338
NCBI-ProteinID:
XP_054317657
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All DBs
Position
20:complement(14205920..14251454)
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AA seq
1090 aa
AA seq
DB search
MATQAYTELQAAPPPSQPPQAPPQAQPQPPPPPPPAAPQPPQPPTAAATPQPQYVTELQS
PQPQAQPPGGQKQYVTELPAVPAPSQPTGAPTPSPAPQQYIVVTVSEGAMRASETVSEAS
PGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLTNIQVPQQALPTQRLVV
QSAAPGSKGGQVSLTVHGTQQVHSPPEQSPVQTNNSSNKTAGAPTGTVPQQLQVHGVQQS
VPVTQERSVVQATPQAPKPGPVQPLTVQGLQPVHVAQESSGSQFPARKAEQRDPRPTPPP
EPPPRPPACSGEAPQLGSPEPPSPHYEPGAEQWVELVGVLPPHLLLPQQKVVFEPLPRLP
ARASPDQRVRIQRIPQVLVFGTAATALKVQQLQQVPVPHVYSSQVQYVEGGDASYTASAI
RSSTYSYPETPLYTQTASTSYYEAAGTAAQVSTPATSQAVASSGSMPMYVSGSQVVASST
STGAGASNSSGGGGSGGGGGGGGGGGGGGGSGSTGGGGSGAGTYVIQGGYMLGSASQSYS
HTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFM
GLRTRRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPFSQKQRLKPIQKMEGM
TNGVAVGQQPSTGLSDISAQVQQYQQFLDASRSLPDFTELDLQGKVLPEGVGPGDIKAFQ
VLYREHCEAIVDVMVNLQFTLVETLWKTFWRHNLSQPSEAPPLAVHDEAEKRLPKAILVL
LSKFEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHAMVNI
PEEMLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQ
ASWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLKPYQGSAGFPKAAKLF
LLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMGEF
ANLATSLNPLDPDKDEEEEEEEESEDELPQDISLAAGGESPALGPETLEPPAKLARTDAR
GLFVQALPSS
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacaggcatatactgagctacaggcagccccgccaccatcccagccgccacag
gccccgccacaagcccagccccagccgccaccgccaccacccccagcggcaccccagccc
ccgcagccacccaccgctgctgccacccctcagccccaatatgtcaccgagctgcagagc
ccccagccccaggcacagccaccgggcggccagaagcagtacgtgacggagctcccggct
gtacccgcaccctcgcagccaaccggtgcacccaccccttcgcctgcaccccagcagtac
atcgtggtcactgtctctgaaggtgccatgcgggccagcgagacggtgtcggaggccagc
cccggctccaccgccagccagaccggcgttcctactcaggtggttcagcaggtgcagggc
acccagcagcggctgctggtccagacgagcgtgcaggccaagccaggccacgtgtcgccc
ctccagctgaccaacatccaagtgccccagcaggctcttcccacgcagcgtctggtggtg
cagagcgcagccccaggcagcaaaggtggccaggtctccctgacggtccatggtacccag
caggtgcactcgcccccagagcagtcgccagtgcagaccaacaactcttccaacaagacg
gccggggcccccacgggcactgtgccacagcagctgcaggtccacggcgtccagcagagt
gtccccgtcacccaagagagatctgtggtccaggccactccacaagcgcccaaacccggc
ccggtgcagccgctgaccgtgcagggcctccagccagtccacgtggctcaagagagctca
ggcagtcagtttcccgctaggaaggcagagcagcgagatccccggcccacgccgccgccg
gagccgccgccccggccgcccgcgtgcagcggcgaggccccgcagctaggcagccccgag
ccgccgtcgccccattacgagccgggcgccgagcagtgggtggagctggtgggcgtgctg
cccccacacctgctcctgccgcagcagaaagtggtcttcgagccactgccccggctcccg
gcccgagccagccccgaccagagggtcaggatccagagaatcccccaggtgctagtgttc
ggcacggccgccacggccctcaaagtgcagcagctccagcaggtgcccgtcccacacgtg
tactccagccaggtgcagtatgtggagggcggcgatgccagctacacagccagtgccatc
cgttccagcacctactcctaccccgagacgccgctgtacacgcagacggcaagcaccagc
tactatgaggccgcaggcacggccgcccaggtcagcacccccgccacctcccaggcggtg
gccagcagtggctccatgcccatgtacgtgtccggcagccaggtcgtcgccagctccacc
agcactggggctggggccagcaacagcagcggaggtggtggcagtggtggtggcggcggc
ggcggcgggggaggaggtggcgggggtggcagtggcagcaccggaggcggcggcagcgga
gcaggcacctacgtgatccaaggcggctacatgctgggcagtgccagccagtcttactct
cacaccacccgtgcctcaccagccacggtccagtggctcctggacaactatgagacggct
gagggtgtgagtctgccacggagcaccctctactgccactacctgctgcactgccaggaa
cagaagctggagcctgtcaacgccgcctccttcggcaagctcatccgctccgtcttcatg
ggcctgcgaacccgccgtctgggcaccaggggcaactccaagtatcactactacggcctg
cgcatcaaggccagctcacccctgctgcggctgatggaggaccagcagcacatggccatg
cggggccagcccttctcgcagaagcagaggctcaagcccattcagaagatggaaggcatg
accaacggcgtggcggtggggcagcagccgagcacggggctgtcggacatcagcgcccag
gtgcagcagtaccagcagtttttggatgcctctcggagcctccctgacttcacagagctc
gacctccagggcaaggtgctgcctgagggcgttgggcccggggacatcaaagccttccag
gtcctgtaccgggaacactgtgaggccattgtcgacgtcatggtgaacctgcagttcacc
ctggtggagactctgtggaagaccttctggaggcacaacctcagccagcccagcgaggca
ccgccgctggccgtgcatgacgaggccgagaagcgactgcccaaagccatcctggtgctc
ctctccaagttcgagcccgtgctccaatggaccaagcactgtgacaacgtgctgtaccag
ggcctggtggaaatcctcattcctgacgtgctgcggcccatccccagtgccttgacccaa
gcgatccggaactttgccaagagcctggagagctggctcacccatgccatggtcaacatc
cccgaggagatgctgcgggtgaaggtggccgcggccggcgccttcgcacagacactgcgg
cgctacacatcgctcaaccacctggcgcaggcggcgcgcgctgtgctgcagaacactgca
cagatcaaccagatgctgagcgacctcaaccgcgtggacttcgccaacgtgcaggagcag
gcctcgtgggtgtgccgctgcgaggaccgcgtggtgcagcggctggagcaggacttcaag
gtgacgctgcagcagcagaactcgctggagcagtgggcggcctggctggacggcgtggtg
agccaggtgctcaagccctaccagggcagcgccggcttccccaaggccgccaagctcttc
ctcctcaagtggtccttctacagctccatggtgatccgggacctgaccctgcgcagcgcc
gccagcttcggttccttccacctcatccggctgctctacgacgagtacatgtactacctg
atagagcaccgcgtagcccaggctaagggcgagacccccatcgccgtcatgggcgagttc
gccaatctggccacctctctgaaccccctggaccccgacaaagacgaggaggaggaagag
gaggaggagagcgaggacgagctgccgcaggacatctcactggcggctggcggcgagtca
cccgcactgggcccagagaccctggagccgccggccaagctggcgcggactgacgcgcgc
ggcctcttcgtgcaggcgctgccctccagctaa
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