Pongo pygmaeus (Bornean orangutan): 129019843
Help
Entry
129019843 CDS
T10128
Symbol
DHX34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyg03019
]
129019843 (DHX34)
Enzymes [BR:
ppyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129019843 (DHX34)
Messenger RNA biogenesis [BR:
ppyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
129019843 (DHX34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_DHX34
HA2_C
Helicase_C
OB_NTP_bind
DEAD
HA2_N
AAA_22
nSTAND3
ResIII
AAA_19
TsaE
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
129019843
NCBI-ProteinID:
XP_054319239
LinkDB
All DBs
Position
20:53405105..53438640
Genome browser
AA seq
1143 aa
AA seq
DB search
MPPPRTREGRDRRDHHRAPSEEEALEKWDWNCPETRRLLEDAFFREEDYIRQGSEECQKF
WTFFERLQRFQNLKTSRKEEKDPGQPKDSIPVLADLPRTYDPRYRINLSVLGPATRGSQG
LGRHLPAERVAEFHRALLHYLDFGQKHAFGRLAKLQRERAALPIAQYGNRILQTLKEHQV
VVVAGDTGCGKSTQVPQYLLAAGFSHVACTQPRRIACISLAKRVGFESLSQYGSQVGYQI
RFESTRSAATKIVFLTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLRRLLP
TRPDLKVILMSATINISLFSSYFSNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPR
PFLRVLESIDHKYPPEERGDLLVFLSGMAEISTVLEAAQTYASHTQRWVVLPLHSALSVA
DQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWI
SQASAEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDP
RTFPFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFS
LVEPVLTIAAALSVQSPFTRSAQSSPECAAARRPLESDQGDPFTLFNVFNAWVQVKSERS
RNSRKWCRRRGIEEHRLYEMANLRRQFKELLEDHGLLAGAQAAQVGDSYSRLQQRRERRA
LHQLKRQHEEGTGRRRKVLRLQEEQDGGSSDEDRASPAPPGASDGVDIQDVKFKLRHDLA
QLQAAASSAQDLSHEQLALLKLVLGRGLYPQLAIPDAFNNSRKDSDQIFHTQAKQGAVLH
PTCVFAGSPEVLHTQELEASSCDGSQDDKDKMSSKHQLLSFVSLLETNKPYLVNCVRIPA
LQSLLLFSRSLDTNGDCSRLVADGWLELQLADSESAVRLLAASLRLRARWESALDRQLVH
QAQRRLEEEEQDVPVSPKEVATLSKELLQFTASKIPYSLRRLTGLEAQNMYVGPHTIPAT
PHLPGLFGSSTLSPHPTKGGYAVTDFLTYNCLTSDTDLYSDCLRTFWTCPHCGLHAPLTP
LERITHENTCPQAPQDGPPGAEEAAPETLQKTSVLQRPYHCEACGKDFLFTPTEVLRHRK
QHM
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcctagaacaagggagggcagggatcgccgagaccaccaccgggctcccagc
gaggaagaggccttggagaaatgggactggaattgtccagagacgcgtcgcctcttggaa
gatgccttcttccgtgaagaggattacatccgtcagggttctgaggaatgtcagaagttt
tggaccttctttgaacgcctgcagagattccagaatctcaagacctccaggaaggaggag
aaagaccctggacagcccaaggacagcatcccagtgctggccgacctacctcgcacttac
gacccacgttaccgcatcaacctttctgttcttggccctgccacgcggggctctcaggga
ctgggcaggcacttgcccgcagagagagtggctgagttccaccgagccctgttgcactac
ctggactttggccagaagcacgcatttgggcgtctggccaagctgcagcgtgagcgggca
gccctccccatcgcccagtatgggaaccgcatcctgcagacactgaaggagcaccaggtg
gtggtagtggctggtgacaccggctgtggcaagtccactcaggtgccccagtacctgctg
gctgctggcttcagtcatgtggcgtgcacccagccccggcggatcgcctgcatctcactg
gccaagcgtgtcggctttgagagcctcagtcagtatggctcacaggtcggctaccagatc
cgctttgagagcacacgttcggcggccaccaagattgtattcctgacagtggggctgctc
ctgcgacaaatccagcgggaacccagcctgccccagtatgaggtcctgattgtggatgaa
gtccatgagcggcatctccacaacgatttcctcctgggtgtcctccggcgcctgttgccc
acacggcctgacctcaaggtcatcctcatgtcggccaccatcaacatctcgctcttctcc
agctatttcagcaatgcccctgtggtacaggtgcctgggaggctgttccccatcacggtc
gtgtaccagccgcaggaggcggagccgaccacgtccaagtcagagaagctggacccgcgg
cctttcctgagggtgctggagtccattgaccacaagtacccgcctgaggagcggggtgac
ctccttgtcttcctcagcggcatggcggagatcagcaccgtgctggaggctgcccagacc
tatgccagccacacccagcgctgggtggtgctgccgctgcacagtgccctgtctgtggct
gaccaggacaaggtatttgatgtggcaccccctggagtccggaaatgcatcctctccacc
aacatcgctgagacctcagtcaccattgacgggatccgctttgtagtagattctggaaag
gtgaaggagatgagctatgacccgcaggccaagctgcagcggctgcaggagttctggatc
agtcaggccagcgcagagcagcggaagggccgggcgggccgcacgggccccggagtctgc
ttccgcctctatgccgaatcggactatgatgctttcgccccctaccccgtcccggaaatt
cggagggtggccctggactcgttggtgctgcagatgaagagcatgagtgtgggggacccc
cgaaccttccccttcatcgagcccccaccaccagccagcctggaaactgccatcctctac
ctccgggaccagggggccctggacagctcagaggccctcacacccattgggtccctgctg
gcccagctgcctgtggacgttgtgattgggaagatgctgatcctgggctccatgttcagc
ctggtcgagcctgtgctcaccatcgcggccgcgctcagcgtccagtcgcccttcacccgc
agcgcccagagcagcccagagtgcgcggcagcacgacggccactggagagcgaccagggt
gacccctttacgctcttcaacgtcttcaacgcctgggtgcaggtgaaatctgaacggagc
agaaactctcgcaagtggtgccgccgccggggcatagaggagcatcgactgtacgagatg
gccaaccttcggcgccagttcaaggagctgttggaggaccacgggctgctggctggggcc
caggctgcgcaggtgggggacagctacagtcggctgcagcagcgccgggagcgccgggcc
ctgcaccagctgaaacgccagcacgaggagggcacggggcgcaggcgcaaggtgctgcgg
ctgcaggaggagcaggacggcggctccagcgacgaggacagggctagcccagccccccca
ggggccagtgatggcgtggacatccaggatgtgaagttcaagcttcggcatgacctggcg
cagctgcaggccgccgccagctcagcccaggacctgagccacgagcagctggctctgctg
aagctggtgctgggccggggcctgtatccgcagctggccatccccgacgccttcaacaac
agccgaaaggactcagaccagattttccacacgcaggccaagcagggcgccgtgctgcac
cccacctgtgtcttcgctggcagccccgaggtgctgcacacacaggagctggaggccagc
agctgcgatggaagccaagacgacaaggacaagatgagcagcaaacaccagctcctcagc
ttcgtgtccctgctggagaccaacaagccgtatctggtgaactgcgtccgcatccctgcc
ctccagtccctcctgctttttagccggtctttggacaccaacggtgactgctcccgcctg
gtggccgatggctggctggagctgcagctggcagacagtgaaagtgccgtccggctcctg
gcggcttccctgcggctccgtgcccgctgggaaagtgccctggaccggcagctggtgcat
caggcccagcggcggctggaggaggaggagcaggatgtgccagtcagccccaaggaggtg
gccaccctgagcaaggaactcctgcaattcacggcatccaagattccttacagcctccgg
cggctcacagggctagaagcccagaacatgtatgtgggaccccacaccatcccagccacc
ccccatcttcctggcctctttggcagctccaccctgtccccccaccccaccaaggggggc
tacgcagtcactgacttcctcacctacaactgcctcacgagtgacacagacctgtacagc
gactgtctccgaaccttctggacctgcccccattgtggcctgcacgcgcccctcacgccc
ctggagcgcatcacccatgagaacacctgcccccaggccccacaggatgggcccccaggg
gctgaggaagctgcccctgaaaccctccagaagacatctgtcctgcagaggccctaccac
tgcgaggcctgcgggaaggacttcctgttcacacccacagaggtgctgcgccaccggaag
cagcacatgtga
DBGET
integrated database retrieval system
