KEGG   Pongo pygmaeus (Bornean orangutan): 129019911
Entry
129019911         CDS       T10128                                 
Symbol
XRCC1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
ppyg  Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ppyg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    129019911 (XRCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppyg03400]
    129019911 (XRCC1)
DNA repair and recombination proteins [BR:ppyg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     129019911 (XRCC1)
SSDB
Motif
Pfam: BRCT XRCC1_N BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 129019911
NCBI-ProteinID: XP_054319429
LinkDB
Position
20:complement(49507527..49539207)
AA seq 673 aa
MSCPAAARTRPTVQKIFSRQTLTENGGQPRQARRPSLWSYSWRRRSRYTVWTSGMMAQLS
WRCWWAVQLEALGSKTMRLECSGTISAHCSPVLPGASDPPATTPQVAGTTGLHHHAQLCT
SQCDKVLLVTSSFMSPSESRSGSNPNRVRMFGPDKLVRAAAEKRWDRVKIVCSQPYSKDS
PFGLSFVRFHSPPDKDEAEAPSQKVTLTKLGQFRVKEEDESANSLRPGALFFSRINKTSP
VTASDPAGPSYAAATLQASSAASSASPVSRAVGSTSKPQESPKGKRKLDLNQEEKKTPSK
PPAQLSPSVPKRPKLPAPTRTPATAPVPAPAQGAVTGKSRGEGTEPRRPRAGPEELGKIL
QGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRI
VRKEWVLDCHRMRRRLPSRRYLMAGTGSSSEEDEASHSSGSGDEAPKLPQKRPQTKTKPT
QAAGPSSPQKPPTPEETKAASPVLQEDIDIEGEQSEGQDNGAEDSGDTEDELRRVAEQKE
HRLPPGQEENGEDPYAGSTDENTDNEEHQEPPDLPVPELPDFFQGKHFFLYGEFPGDERR
KLIRYVTAFNGELEDYMSDRVQFVITAQEWDPSFEEALMDNPSLAFVRPRWIYSCNEKQK
LLPHQLYGVVPQA
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgtcgtgtcctgcagcagccaggactcgacccactgtgcagaaaatcttctcaaggcag
acacttaccgaaaatggcgggcagccaaggcaggcgagaagaccatctctgtggtcctac
agttggagaaggaggagcagatacacagtgtggacatcgggaatgatggctcagctttcg
tggaggtgctggtgggcagttcagctggaggcactggggagcaagactatgaggctggag
tgcagtggcacgatctcagctcactgcagccctgtcctcccaggtgcaagtgatcctcct
gccacaacccctcaagtagctgggactacaggattgcaccaccatgcccaactttgcact
agtcagtgtgacaaggtccttctggtcacctcatctttcatgtccccttccgagagccgc
agtggctcaaaccccaaccgtgttcgcatgtttgggcctgacaagctggtccgggcagcc
gccgagaagcgctgggaccgggtcaaaattgtttgcagccagccctacagcaaggactcc
ccctttggcttgagttttgtacggtttcatagccccccagacaaagatgaggcagaggcc
ccatcccagaaggtgacattgaccaagcttggccagttccgtgtgaaggaggaggatgag
agcgccaactctctgaggccaggggctctcttcttcagccggatcaacaagacatcccca
gtcacagccagcgacccggcaggacccagctatgcagctgctaccctccaggcttctagt
gctgcctcctcagcctctccagtctccagggccgtaggcagcacctccaagccccaggag
tctcccaaagggaagaggaagttggatttgaaccaagaagaaaagaagacccccagcaaa
ccaccagcccagctgtcgccatctgttcccaagagacctaaattgccagctcccactcgt
accccagccacagccccagtccctgccccagcacagggggcagtgacaggcaaatcccga
ggagaaggcaccgagcccagacgaccccgagctggcccagaggagctggggaagatcctt
cagggtgtggtagtggtgctgagtggcttccagaaccccttccgctccgagctgcgagat
aaggccctagagcttggggccaagtatcggccagactggacccgggacagcacgcacctc
atctgtgcctttgccaacacccccaagtacagccaggtcctaggcctgggaggccgcatc
gtgcgtaaggagtgggtgctggactgtcaccgcatgcgtcggcggctgccctcccggagg
tacctcatggcagggacaggttccagcagtgaggaggatgaggcctctcacagcagcggc
agcggagatgaagcccccaagcttcctcaaaagcgcccccagaccaaaaccaagcccact
caggcagctggacccagctcaccccagaagcccccaacccctgaagagaccaaagcagcc
tcaccagtgctccaggaagatatagacattgagggggaacagtcagaaggacaggacaac
ggggcggaagattctggggacacagaggatgagctgaggagggtggctgagcagaaggaa
cacagactgccccctggccaggaggagaatggggaagacccgtatgcaggctccacggat
gagaacacagacaacgaggaacaccaggagcctcctgatctgccagtccctgagctccca
gatttcttccagggcaagcacttctttctttacggggagttccctggggacgagcggcgg
aaactcatccgatacgtcacagctttcaatggggagctcgaggactatatgagcgaccgg
gttcagtttgtgatcacagcacaggaatgggatcccagctttgaggaggccctgatggac
aacccctccttggcattcgttcgtccccgatggatctacagttgcaatgagaagcagaag
ttacttcctcaccagctctatggggtggtgccgcaagcctga

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