Pongo pygmaeus (Bornean orangutan): 129020080
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Entry
129020080 CDS
T10128
Symbol
ATG4D
Name
(RefSeq) cysteine protease ATG4D isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04136
Autophagy - other
ppyg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129020080 (ATG4D)
04136 Autophagy - other
129020080 (ATG4D)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppyg01002
]
129020080 (ATG4D)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppyg04131
]
129020080 (ATG4D)
03029 Mitochondrial biogenesis [BR:
ppyg03029
]
129020080 (ATG4D)
Peptidases and inhibitors [BR:
ppyg01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
129020080 (ATG4D)
Membrane trafficking [BR:
ppyg04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
129020080 (ATG4D)
Mitochondrial biogenesis [BR:
ppyg03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
129020080 (ATG4D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
129020080
NCBI-ProteinID:
XP_054319868
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All DBs
Position
20:10794306..10803511
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AA seq
474 aa
AA seq
DB search
MNSVSPAAAQYRSSSPEDARRRPEVRRPRGPRGPDPNGLGPSGASGPALGSPGAGPSEPD
EVDKFKAKFLTAWNNVKYGWVVKSRTSFSKISSIHLCGRRYRFEGEGDIQRFQRDFVSRL
WLTYRRDFPPLPGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWTWSEGTGLGPPELS
GSASPSRYHGPARWIPPRWAQGAPELEQERRHRQIVSWFADHPRAPFGLHRLVELGQSSG
KKAGDWYGPSLVAHILRKAVESCSEVTRLVVYVSQDCTVYKADVARLVARPDPTAEWKSV
VILVPVRLGGETLNPVYVPCVKELLRCELCLGIMGGKPRHSLYFIGYQDDFLLYLDPHYC
QPTVDVSQANFPLESFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSS
ATERYPMFTLAEGHAQDHSLDDLCSQLSQPTLRLPRTGRLLRAKRPSSEDFVFL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaactcagtgtcgccggccgccgcgcagtaccggagcagcagcccggaggacgcgcgc
cgccggcccgaggtccgcaggccgcggggtcccagaggcccagaccccaacggcctgggg
ccttccggagccagcggccccgctcttggctctcccggggctggcccgagtgaaccggac
gaagtggacaagttcaaggccaagttcctgacagcctggaacaacgtcaagtacggttgg
gtggttaaaagccggaccagctttagcaagatctccagcatccacctctgtggtcgccgc
taccgtttcgagggcgagggtgacatacagcgtttccagcgggactttgtgtcccgcctg
tggctcacataccgccgggacttcccgccccttcctgggggctgcctgacctcagactgt
ggctgggggtgcatgttacgtagcggccagatgatgctggcacagggcctgctgctgcat
ttcctgcccagagactggacatggtccgagggcacgggcctgggcccccctgagctgtca
gggtcagcctctcccagccggtaccatgggcctgcccgctggatacccccacgctgggcc
cagggtgcccctgagttggagcaggaacgccggcaccggcagattgtgtcctggttcgcc
gaccacccccgggccccctttggcctacaccggctggtggagcttgggcagagctcaggc
aagaaggcaggtgactggtatgggccatcgctggtggcacacatcctcaggaaagccgtg
gagagctgctccgaggtcacccgcctggtggtgtacgtttctcaggactgcacagtgtac
aaggcggatgtggcacgcctggtggccaggccagaccccacagccgagtggaagtctgtg
gtcatcctggtgcccgtgcgactgggtggcgagactctcaaccccgtgtatgtgccctgc
gtgaaggaactcctgcgttgcgagctgtgcctgggcatcatgggcgggaaaccgcgacac
tcactgtacttcattggctaccaagatgacttcctgctgtacctggaccctcactactgc
cagcccactgtggatgtcagccaggccaacttccccctggagtccttccactgcacctcg
ccccgcaagatggcctttgccaagatggacccaagctgtactgtgggcttctatgctgga
gacaggaaggagtttgagacactctgctcagagctgaccagggtcctcagctcctcctca
gccacggagcggtaccccatgttcaccctggccgagggccatgctcaggaccacagcctg
gacgacctctgctcccagctctcccagcccacactccggctccctcgcacagggcggctc
ctcagggccaaacgtcccagctctgaggactttgtgtttttataa
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