Pongo pygmaeus (Bornean orangutan): 129020427
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Entry
129020427 CDS
T10128
Symbol
SCN1B
Name
(RefSeq) sodium channel subunit beta-1
KO
K04845
voltage-gated sodium channel type I beta
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
129020427 (SCN1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppyg04040
]
129020427 (SCN1B)
Ion channels [BR:
ppyg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129020427 (SCN1B)
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GFIT
Motif
Pfam:
V-set
ACT_ACR9_C
Ig_3
DUF5326
TRASH_HVO_1752_C
ig
Ig_2
Protocadherin
Motif
Other DBs
NCBI-GeneID:
129020427
NCBI-ProteinID:
XP_054320694
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All DBs
Position
20:40315695..40325696
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AA seq
218 aa
AA seq
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MGRLLALVVGAALVSSACGGCVEVDSETEAVYGMTFKILCISCKRRSETNAETFTEWTFR
QKGTEEFVKILRYENEVLQLEEDERFEGRVVWNGSRGTKDLQDLSIFITNVTYNHSGDYE
CHVYRLLFFENYEHNTSVVKKIHIEVVDKANRDMASIVSEIMMYVLIVVLTIWLVAEMIY
CYKKIAAATETAAQENASEYLAITSESKENCTGVQVAE
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggctgctggccttagtggtcggcgcggcactcgtgtcctcagcctgtgggggc
tgcgtggaggtggactcggagaccgaggccgtgtatgggatgaccttcaaaattctttgc
atctcctgcaagcgccgcagcgagaccaacgctgagaccttcaccgagtggaccttccgc
cagaagggcactgaggagtttgtcaagatcctgcgctatgagaatgaggtgttgcagctg
gaggaggatgagcgcttcgagggccgcgtggtgtggaatggcagccggggcaccaaagac
ctgcaggatctgtctatcttcatcaccaacgtcacctacaaccactcgggcgactacgag
tgccacgtctaccgcctgctcttcttcgaaaactacgagcacaacaccagcgtcgtcaag
aagatccacattgaggtagtggacaaagccaacagagacatggcatccatcgtgtctgag
atcatgatgtatgtgctcattgtggtgttgaccatatggctcgtggcagagatgatttac
tgctacaagaagatcgctgccgccacggagactgctgcacaagagaacgcctcggaatac
ctggccatcacctccgaaagcaaagagaactgtacgggcgtccaggtggccgaatag
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