Pongo pygmaeus (Bornean orangutan): 129020494
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Entry
129020494 CDS
T10128
Symbol
POLD1
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X3
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03030
DNA replication
ppyg03410
Base excision repair
ppyg03420
Nucleotide excision repair
ppyg03430
Mismatch repair
ppyg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129020494 (POLD1)
03410 Base excision repair
129020494 (POLD1)
03420 Nucleotide excision repair
129020494 (POLD1)
03430 Mismatch repair
129020494 (POLD1)
03440 Homologous recombination
129020494 (POLD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppyg03032
]
129020494 (POLD1)
03400 DNA repair and recombination proteins [BR:
ppyg03400
]
129020494 (POLD1)
Enzymes [BR:
ppyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
129020494 (POLD1)
DNA replication proteins [BR:
ppyg03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
129020494 (POLD1)
DNA repair and recombination proteins [BR:
ppyg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
129020494 (POLD1)
MMR (mismatch excision repair)
DNA polymerase delta complex
129020494 (POLD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
129020494
NCBI-ProteinID:
XP_054320864
LinkDB
All DBs
Position
20:56475418..56507569
Genome browser
AA seq
1107 aa
AA seq
DB search
MDGKRRPGPGPGVPPKRARGGLWDDDDAPRPSQFEEDLALMEEMEAERRLQEQEEEELQS
VLEGVVDGQVLPSAIDPRWLRPTPPALDPQTEPLIFQQLEIDHYVGPAQPVPGGPPPSHG
SVPVLRAFGVTDEGFSVCCHIHGFAPYFYTPAPPGFGPEHLGDLQRELNLAISRDNRGGK
ELTGPAVLAVELCSRESMFGYHGHGPSPFLRITLALPRLVAPARRLLEQGIRVAGLGTPS
FAPYEANVDFEIRFMVDTDIVGCNWLELPAGKYALRLKEKATQCQLEVDVLWSDVVSHPP
EGPWQRIAPLRVLSFDIECAGRKGIFPEPERDPVIQICSLGLRWGEPEPFLRLALTLRPC
APILGAKVQSYEKEEDLLQAWSTFIRIMDPDVITGYNIQNFDLPYLISRAQTLKVQTFPF
LGRVAGLRSNIRDSSFQSKQTGRRDTKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFH
FLGEQKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAYLPLRLLERLMVLVNAVEMARVTG
VPLSYLLSRGQQVKVVSQLLRQAMHEGLLMPVVKSEGGEDYTGATVIEPLKGYYDVPIAT
LDFSSLYPSIMMAHNLCYTTLLKPGAVQKLGLTEDQFIRTPTGDEFVKTSVRKGLLPQIL
ENLLSARKRAKAELAKETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSV
TGFGRQMIEKTKQLVESKYTVENGYSTSAKVVYGDTDSVMCRFGVSSVAEAMALGREAAD
WVSGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRPDAHDRMDCKGLEAVRRDNCPLV
ANLVTASLRRLLINRDPEGAVAHAQDVISDLLCNRVDISQLVITKELTRAASDYAGKQAH
VELAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQ
QLAKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRRNCCIGCRTVLS
HQGAVCEFCQPRESELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFY
MRKKVRKDLEDQEQLLRRFGPPGPEAW
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggatggcaagcggcggccaggcccagggcccggggtgcccccaaagcgggcccgtggg
ggcctctgggatgatgatgacgcacctcggccatcccaattcgaggaggacctggcactg
atggaggagatggaggcagagcgcaggctgcaggagcaggaggaggaggagctgcagtca
gtcctggagggggttgtagacgggcaggtcctaccatcagccatagatcctcgctggctt
cggcccacgccaccagccctggacccccagacagagcccctcatcttccaacagttggag
attgaccattatgtgggcccagcgcagcctgtgcctggcgggcccccaccttcccacggc
tccgtgcctgtgctccgtgccttcggggtcaccgatgaggggttctctgtctgctgccac
atccacggcttcgctccctacttctacaccccagcgccccctggtttcgggcccgagcac
ctgggtgacctgcaacgggagctgaacttggccatcagccgggacaatcgcggggggaag
gagctgactgggccggccgtgctggccgtggagctgtgctcccgagagagcatgtttggg
taccacgggcacggcccctccccgttcctgcgcatcaccctggcgctgccacgcctcgtg
gccccggcccgccgtctcctggaacagggcatccgtgtagcaggcctgggcacgcccagc
ttcgcgccctacgaggccaacgtcgactttgagatccggttcatggtggacacggacatc
gtcggctgcaactggctggagctcccagccgggaaatacgccctgaggctgaaggagaag
gctacgcagtgccagctggaggtggacgtgctgtggtctgatgtggtcagtcacccaccg
gaagggccgtggcagcgcattgcacccttgcgcgtgctcagcttcgatatcgagtgcgcc
ggccgcaaaggcatcttccctgagcctgagcgggaccctgtcatccagatctgctcgctg
ggcctgcgctggggggagccagagcccttcctacgcttggcgctcaccctgcggccctgt
gcccccatcctgggtgccaaggtgcagagctacgagaaggaggaggacctgctgcaggcc
tggtccaccttcatccgtatcatggaccctgacgtgatcaccggttacaacatccagaac
tttgaccttccgtacctcatctctcgggcccagaccctcaaggtacaaacgttccctttc
ctgggccgtgtggccggccttcgctccaacatccgggactcttcgttccagtccaagcag
acgggccggcgggacaccaaggtggtcagcatggtgggccgcgtgcagatggacatgctg
caggtgctgctgcgggagtacaagctccgctcctacacgctcaatgccgtgagcttccac
ttcctgggcgagcagaaggaggacgtgcagcacagcatcatcaccgacctgcagaatggg
aacgaccagacccgccgccgcctggctgtgtactgcctgaaggatgcctacctgccactg
cggctgctggagcggctcatggtgctggtgaacgccgtggagatggcgagggtcactggc
gtgcccctcagctacctgctcagtcgtggtcagcaggtcaaggttgtatcccagctgttg
cggcaggccatgcacgaggggctgctgatgcccgtggtgaagtcagagggtggtgaggac
tacacgggagccactgtcatcgagcccctcaaagggtactacgacgtccccatcgccacc
ctggacttctcctcgctgtacccgtccatcatgatggcccacaacctgtgctacaccacg
ctcctgaagcccggagctgtgcagaaactgggactgactgaggatcagttcatcaggacg
cccaccggggacgagtttgtgaagacctcagtgcggaaggggctgctgccccagatcctg
gagaacctgctcagcgcccggaagagggccaaggccgagctggccaaggagacagacccc
ctgcggcgccaggtcctggatggacggcagctggcgctgaaggtgagcgccaactccgta
tacggcttcactggcgcccaggtgggcaagttgccgtgcctggagatctcacagagcgtc
acggggttcggacgtcagatgatcgagaaaaccaagcagctggtagagtctaagtacaca
gtggagaatggctacagcaccagcgccaaggtggtgtatggtgacaccgactccgtcatg
tgccgattcggcgtgtcctcggtggctgaggcgatggccctggggcgggaggccgcggac
tgggtgtcaggtcacttcccgtcacccatccggctcgagtttgagaaggtctacttccca
tacctgcttatcagcaagaagcgctacgcgggcctgcttttctcctcccggcccgacgcc
cacgaccgcatggactgcaaaggcctggaggccgtgcgcagggacaactgccccctcgtg
gccaacctggtcactgcctcactgcgtcgcctgctcatcaaccgagaccctgagggcgcg
gtggcccatgcacaggacgtcatctcggacctgttgtgcaaccgcgtcgacatctcccag
ctggtcatcaccaaggagctgacccgcgcggcctccgactacgctggcaagcaggcccac
gtggagctggccgagaggatgaggaagcgggaccccgggagtgcgcccagcctgggcgac
cgcgtcccctacgtgatcatcagtgccgccaagggtgtggccgcctacatgaagtcggag
gacccgctgttcgtgctggagcacagcctgcccatcgacacgcagtactacctggagcag
cagctggccaagcccctcctgcgcatcttcgagcccatcctgggcgagggccgtgccgag
gctgtgctactgcggggggaccacacgcgctgcaagacggtgctcacaggcaaggtgggc
ggcctcctggccttcgccaaacgccgcaactgctgcatcggctgccgcacagtactcagc
caccagggagccgtgtgtgagttctgccagccccgggagtctgaactgtatcagaaggag
gtatcccatctgaatgccctggaggagcgcttctcgcgcctctggacgcagtgccagcgc
tgccagggcagcctgcacgaggatgtcatctgcaccagccgggactgccccatcttctac
atgcgcaagaaggtgcggaaggacctggaagaccaggagcagctcctgcggcgcttcggg
ccccctggccctgaggcctggtga
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