Pongo pygmaeus (Bornean orangutan): 129020498
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Entry
129020498 CDS
T10128
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
129020498 (SHANK1)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
129020498
NCBI-ProteinID:
XP_054320869
LinkDB
All DBs
Position
20:complement(56755558..56815910)
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AA seq
2169 aa
AA seq
DB search
MTHSPATSEDEERHSASECPEGGSESDSSPDGPGRGPRGSRGQGSGAPGSLASVRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LFNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGADKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGTGLTVPPALLRANSDTSMALPDWMVFSAPGAASSGAPGPTSGSQGQSQPSAPTTK
LSSGTLRSASSPRGARARSPSRGRHPEDAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQESKQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIGPGSDYIIK
EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGD
FLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPP
TISLRSKSMTSELEEMVSPWKKKSEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQT
ISASESPGPGGLASLGKHRPKGFFATESSFDPHHRAQPSYERPSFLPPGPGLMLRQKSIG
AAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPVPSSSGRLTPSPRGG
PFNPGSGGPLPASSPASFDGPSPPDTRVGSREKSLYHSGPLPPAHHHPPHHHHHHAPPPQ
PHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHGSAGG
GGGSSQGPALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPAPSP
TSPASPQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEPAGGGG
GGGSSPSPAPAMSPVPPSPSPVPTPASPSGPATLDFTSQFGAALVGAARREGGWQNEARR
RSTLFLSTDAGDEDGGDGGLGTGAAPGPRLRHSKSIDEGMFSAEPYLRLESAGSGAGYGG
YGAGSRAYGGGGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKESSEGGG
APQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQEKS
LPASPPAARRSLLHRLPPTAPGVGPLLLQLGTEPPAPHPGVSKPWRSAAPEEPERLPLHV
RFLENCQPRAPATSGRGPPSEDGPGVPPPSPRRSVPPSPTSPRASEENGLPLLVLPPPAP
SVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDTPAPVTPLPPVPPPAVAA
APPTLDSTASSLTSYDSEVATLTQGASAAPGDPPPPGPPAPAAPAPAAPQPGPDPPPGTD
SGIEEVDSRSSSDHPLETISSASTLSSLSAEGGGSAGGGGGAGAGVASGPELLDTYVAYL
DGQAFGGSGTPGPPYPPQLLTPSKLRGRALGASGGLRPGPSGGLRDPVTPTSPTVSVTGA
GTDGLLALRACSGPPTAGVAGGPVAVEPEVPQVPLPTASSLPRKLLPWEEGPGPPPPPLP
GPLAQPQASALASVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGSGDSHHGGASYV
PERTSSLQRQRLSDDSQSSLLSKPVSSLFQNWPKPPLPPLPTGTGVSPTAAAAPGATSPS
ASSSSTSTRHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPILPSGPLYPGL
FDIRGSPTGGAGGSADPFAPVFVPPHPGISGGLGGALSGASRSLSPTRLLSLPPDKPFGA
KPLGFWTKFDVADWLEWLGLAEHRAQFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNID
RALKFFLER
NT seq
6510 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgacaagcgaggacgaggaacgccacagtgccagcgagtgtccc
gaggggggctcagagtccgacagctccccagacgggccgggtcgaggcccccgggggagc
cggggccagggcagtggggcacctggtagcctggcctctgttagaggcctccagggccgc
tcaatgtccgtcccagacgacgcccacttcagcatgatggtcttcaggattggcatcccg
gacctgcaccagacaaaatgcctgcgcttcaaccccgatgccaccatctggacggccaag
cagcaggtgctctgtgccctgagcgagagcctgcaggatgtgctcaactatggcctgttc
caaccggccacctcaggccgcgacgccaacttcctggaggaggagaggctgctgcgggag
tacccccagtcctttgagaagggggtcccctacctggagttccgatacaagacccgagtt
tacaaacagaccaacctggatgagaagcagctggccaagttgcacacgaagacggggttg
aagaagttcctggagtatgtgcagctcgggacatctgacaaggtggcgcggctgctggac
aaggggctggaccccaattaccatgactcggattcgggagagacccccttgacactggcg
gcccagaccgaaggctctgtagaggtgattcgaaccctgtgcctgggcggggcccacatc
gacttccgggcccgggatggcatgaccgcactgcataaggccgcatgcgcccgacactgc
ctggcgctcacggcgctcctggaccttgggggttcccccaactacaaggaccgtcggggg
ctgacccctctgttccacacggctatggtgggtggtgacccccgatgctgtgagctgctc
ctgttcaacagggcccagctgggcatagctgatgagaacggctggcaggaaatccaccag
gcctgccagcggggtcactctcagcacctggagcatctgctcttctacggggctgagcct
ggagcccagaacgcctcggggaacacggctctgcacatctgcgccctctacaacaaggag
acctgtgccaggatcctcctgtatcgaggtgccgacaaggatgtgaagaataacaacgga
cagacccccttccaggtggcagtgattgctgggaattttgagctgggggagctgatccga
aaccaccgagaacaggatgtggtgcccttccaggagtcccccaagtacgcggcccggcga
cgggggcccccaggcacagggctgacggtgcccccggcgctgctgcgggccaacagtgac
accagcatggcgctgcccgactggatggtgttctccgccccgggggccgcgtcctctggg
gcccctggccctacctcagggtcccagggccagtcgcagccctcggcccccaccaccaag
ctcagcagcgggaccctccgaagtgccagcagcccccggggtgccagggcccgctctcca
tcccgagggaggcaccctgaggacgccaagaggcagccccgaggccggcccagctccagc
gggacaccccgggaagggccagccgggggcacggggggctcagggggccccgggggctcc
ctgggcagccgcgggaggcggaggaagctctactcagcggtacccggacgctccttcatg
gctgtgaagtcctaccaggcccaagccgagggggagatctccctgagcaagggcgagaag
atcaaagtacttagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgtgtt
ggctggttcccctctgactgcctggaagaagtggcaaatcgctctcaggagagcaagcaa
gaaagccgcagtgacaaggcaaagagactcttccggcattataccgtgggctcctacgac
agctttgatgccccaagcttaatggatgggattggcccagggagcgattacatcattaag
gagaagacagtcttgctgcagaagaaggacagtgaggggtttgggttcgtgctccggggg
gccaaggcgcagacccccatcgaggagttcacccccaccccggccttcccggcgctgcag
tacctggagtcagtggacgagggtggcgtggcatggcgagctggactgcgaatgggagac
ttcctcatcgaggtgaatgggcagaatgtggtgaaggtcggccaccgacaggtggtgaac
atgatccgccaagggggcaacacgctgatggtgaaggtggtgatggtcaccaggcacccg
gacatggatgaggcagtgcacaagaaagcaccccagcaggccaagcggctgccgccccca
accatctccctgcgttccaaatctatgacctcagagctggaggagatggtctccccctgg
aagaagaagagtgagtacgagcagcagccggcgccggttcctagcatggagaaaaagcgg
accgtgtatcagatggctctcaacaaactggacgaaatcctggccgcagctcaacagacc
atcagtgcaagcgagagccctgggcccggtggcctcgcgtccctgggcaaacaccgaccc
aaaggtttctttgccactgagtcgagcttcgatccccaccaccgtgcccagccaagttac
gagcgtccttctttcctgcctccaggacctgggttgatgctccggcaaaaatctatcggt
gcagcagaagatgacagaccttacctagcacccccagccatgaaattcagccgcagcctg
tctgtgcctggttcggaggacattccaccgccacccaccacgtccccaccggagcctccc
tacagcacacctccagtcccctcctcctcagggcgcctcaccccctcccctcggggaggg
cccttcaaccccggctctggtggccccctccccgcctcctcccctgcgtcctttgacggg
ccctcccctcccgacactcgcgtggggagccgcgagaagagcctgtaccacagtgggccc
ctgccccctgcccaccaccacccgccccaccaccaccaccaccacgccccgccccctcag
ccccaccaccaccacgcccacccccctcatcctcccgagatggagacaggcggctctccc
gacgaccctccaccccgcctggctctggggccccagcccagcctgcgaggctggaggggc
ggcggtcccagcccgaccccgggggccccgtccccatcgcaccacggcagcgcgggcggg
ggcggcggctcctcccagggcccggctctgcgctatttccagctgcccccgcgggcggcc
agcgcagccatgtacgtgcccgcccgctcgggccgcggccgcaagggcccgctggtcaag
cagaccaaggtggaaggcgagccccagaagggcggcggcctcccgcccgcgccgtcgccc
acgtccccggcctccccgcagccgccgcccgccgtggccgcgccctcggagaagaactcc
atccccatccccaccatcatcatcaaggccccgtccaccagtagcagcggccgcagcagc
cagggcagcagcaccgaggcggagccccccacccagcccgagcccgcgggaggcggcggc
ggcggcggctcctcgcccagccctgccccggccatgtcacccgtgcccccgtccccctcg
cccgtgcccacccccgcctcgcccagcggtccggccacgctggacttcacgagccagttc
ggggccgccctggtgggggcggcccggagggaggggggctggcagaatgaggcgcgccgg
cgctccacgctgttcctctccaccgacgcgggggacgaggacggcggggacggcgggctg
ggcacaggggcggccccgggcccgcggctgcgccactccaaatccatcgacgagggcatg
ttctccgccgagccctacctccgactggagtctgcgggcagcggcgcgggctacggcggc
tacggggccggtagccgagcctacgggggtggcgggggcagcagcgccttcaccagcttc
ctgcccccgcgacccctggtgcacccgctgaccggcaaggccctggatcccgcctccccg
ctggggctggccctggccgcccgcgagcgagcgctgaaggagtcctcggagggcggcggg
gccccccagccccctcccaggcccccatcgccccgctacgaggccccgccgcccaccccg
caccaccactcgccccacgcccaccacgagccagtgctgcgtctctggggggcctccccg
ccggaccctgcgcgccgggagctggggtacagggccgggctgggcagccaggagaagtcc
cttcccgccagcccgcccgccgcccggcgttccctgctacaccgcctgccgcccaccgct
cccggggtggggcccctcctgctgcagctggggacggagcccccggccccgcaccccgga
gtgagcaagccctggaggtccgcagcccccgaagaacccgagcggctgccgctgcacgtg
cggttccttgaaaactgccagccccgggcccctgcgacgagcggaagggggcccccctcc
gaggacgggccgggggtcccgccgcccagcccacgccggtccgtgcccccctccccgacc
tccccgagggccagcgaagagaacgggctgcccctgctggtcctgccgcctcccgccccc
tcggtggatgtggaagatggcgaattccttttcgtggaaccgctgcctccgcctctggaa
ttctccaacagcttcgaaaagccggagtcgcccctcacgcctgggcctccccacccgctg
cccgacacacctgccccggtcaccccgttaccccctgtgccacccccggctgtggccgca
gcccctcccaccctggactccaccgcatccagcctgacatcctatgacagcgaggtggcc
accctgacccagggggcctccgccgctcctggggacccccctccaccaggcccgcctgcc
ccagcagcaccggctcccgctgccccacagcctggcccggaccctccgcctggcacggat
tctggcatcgaggaggtggacagtcggagcagcagtgaccacccactggagaccattagc
agcgcctccacgctgagcagcctatctgccgaaggtggtggcagcgcagggggtgggggc
ggggctggggccggtgtggccagtgggccggagcttctggacacctatgtggcctacctg
gacggccaggcctttgggggcagcggtactcccggcccgccataccctcctcagctcttg
actccctctaagctccggggccgggcgctaggagccagcggaggcctgcgacctggcccc
agcgggggactccgagaccctgtcacccccaccagccccaccgtctcggtgacaggggct
ggaaccgatgggctgctggccctgcgtgcttgttcaggaccccccacggcaggcgtggct
gggggtccggtggctgtagagccagaagtcccacaggtgcccttgccgacggcctcctct
ctgcctcggaagctgctgccctgggaggagggcccgggcccaccgccaccacctctgccc
ggacccctggcccagcctcaggcctcagccttggcctcagtaaaagccagcatcatcagt
gaactcagctccaagcttcagcagtttgggggctcctcagcagccggcggcgctctgccc
tgggcccgaggaggcagtgggggaagtggagacagccaccacgggggagccagctatgtc
cccgagaggacctcctccctgcagcggcagagactctccgacgattcccagtcctcactc
ctctccaagcctgtcagcagcctgtttcagaactggcccaaaccacctctgccgccactc
cccaccggaacaggggtctcccctacagccgctgcggccccaggggccacctcaccctca
gcctcctcctcctccacgtccacccgccacctccagggcgtggagttcgagatgcggccc
cctctgctccgccgggcccccagcccctcgctgctgcccgcctcggagcacaaggtcagc
cctgcgcccaggccctcatccctgcccatcctgccttccggacccctctacccaggcctc
tttgacatccgtggctccccaactggaggggcaggaggctcggctgaccccttcgcccca
gtctttgtgccgccacacccggggatatccggggggctcgggggagccttgtcaggggcc
tcgcgctccctctcaccaacccgcctgctctcgctgcccccggacaagccgtttggcgct
aaacctctggggttctggaccaagttcgacgtggctgattggctggagtggctgggtttg
gcggagcaccgagcccagttcctggaccacgagattgacggctcccacctgcccgccttg
acgaaggaggactacgtcgatctaggtgtgaccagggtgggccaccgcatgaacatcgac
cgggctctcaaattcttcctggagaggtga
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