Pongo pygmaeus (Bornean orangutan): 129020726
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Entry
129020726 CDS
T10128
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg03018
RNA degradation
ppyg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129020726 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
129020726 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppyg03019
]
129020726 (LSM7)
03041 Spliceosome [BR:
ppyg03041
]
129020726 (LSM7)
Messenger RNA biogenesis [BR:
ppyg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129020726 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
129020726 (LSM7)
Spliceosome [BR:
ppyg03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129020726 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
129020726
NCBI-ProteinID:
XP_054321453
LinkDB
All DBs
Position
20:complement(2086822..2094001)
Genome browser
AA seq
140 aa
AA seq
DB search
MFPSNAPRPRATHAPRMRVGGSKVAGRCLRRATRRDKMADKEKKKKESILDLSKYIDKTI
RVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVL
ICPQDGMEAIPNPFIQQQDT
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgtttcccagcaacgccccgagaccccgggccacgcatgcgccgcgcatgcgcgtgggg
gggtcaaaggtcgcggggcggtgcctgcgaagagccacacggcgcgacaagatggcggat
aaggagaaaaagaaaaaggagagcatcttggacttgtccaagtacatcgacaagacgatc
cgggtaaagttccagggaggccgcgaagccagtggaatcctgaagggcttcgacccactt
ctcaaccttgtgctggacggcaccattgagtacatgcgagaccctgacgaccagtacaag
ctcacggaggacacccggcagctgggcctcgtggtgtgccggggcacatccgtggtgctg
atctgcccgcaggacggcatggaggccatccccaaccccttcatccagcagcaggacacc
tag
DBGET
integrated database retrieval system
