Pongo pygmaeus (Bornean orangutan): 129020960
Help
Entry
129020960 CDS
T10128
Symbol
COLGALT1
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Pathway
ppyg00310
Lysine degradation
ppyg00514
Other types of O-glycan biosynthesis
ppyg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
129020960 (COLGALT1)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
129020960 (COLGALT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ppyg01003
]
129020960 (COLGALT1)
Enzymes [BR:
ppyg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
129020960 (COLGALT1)
Glycosyltransferases [BR:
ppyg01003
]
O-Glycan biosynthesis
O-linked Gal type
129020960 (COLGALT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
129020960
NCBI-ProteinID:
XP_054321944
LinkDB
All DBs
Position
20:17984460..18012860
Genome browser
AA seq
622 aa
AA seq
DB search
MAAAPRAGRRRGQLLLALLFLLLAPLPPGGPPGADAYFPEERWSPESPLQAPRVLIALLA
RNAAHALPTTLGALERLRHPRERTALWVATDHNMDNTSTVLREWLVAVKSLYHSVEWRPA
EEPRSYPDEEGPKHWSDSRYEHVMKLRQAALKSARDMWADYILFVDADNLILNPDTLSLL
IAENKTVVAPMLDSRAAYSNFWCGMTSQGYYKRTPAYIPIRKRDRRGCFAVPMVHSTFLI
DLRKAASRNLAFYPPHPDYTWSFDDIIVFAFSCKQAEVQMYVCNKEEYGFLPVPLRAHST
LQDEAESFMHVQLEVMVKHPPAEPSRFISAPTKTPDKMGFDEVFMINLRRRQDRRERMLR
ALQAQEIECRLVEAVDGKAMNTSQVEALGIQMLPGYRDPYHGRPLTKGELGCFLSHYNIW
KEVVDQGLQKSLVFEDDLRFEIFFKRRLMNLMRDVEQEGLDWDLIYVGRKRMQVEHPEKA
VPRVRNLVEADYSYWTLAYVISLQGARKLLAAEPLSKMLPVDEFLPVMFDKHPVSEYKAH
FSLRNLRAFSVEPLLIYPTHYTGDDGYVSDTETSVVWNNEHVKTDWDRAKSQKMREQQAL
SREAKNSDVLQSPLDSAARDEL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccccacgcgcgggccggcggcgcgggcagctgctcctagcgctgctgttt
ctgctgctggcgccactgccgccggggggcccgccgggcgccgacgcctacttccccgag
gagcgctggagcccggagtcgcccctgcaggcgccgcgcgtgctcatcgcgctgttggcg
cgaaacgcggcccacgcgttgcccaccacgctgggcgcactcgagcggctgcggcacccg
cgggagcgcacggcgctatgggtggctacggaccacaacatggataacacgtcaactgtg
ctgcgggagtggctggtggccgtgaagagtttgtaccattccgtggagtggcggccagcg
gaggagcccaggtcctacccggacgaggaaggcccgaaacactggtctgactcacgctac
gagcatgtcatgaagttgcgccaggcagccctgaaatcagctcgagacatgtgggctgat
tacatcctgtttgtagatgcggacaacctgatcctcaaccctgacacactgagcctgctc
atcgctgagaacaagacggtggtcgcccccatgctggattcccgggctgcgtactccaac
ttctggtgtggaatgacttcccagggctactacaagcgcacacctgcctacatccccatc
cgcaagcgagaccgccggggctgctttgcagttcccatggtgcactcgaccttcctgatc
gacctgcggaaggcggcgtccaggaacctggccttctacccacctcaccctgactacacc
tggtcctttgacgacatcatcgtctttgccttctcctgcaagcaggcagaggtacagatg
tatgtgtgcaacaaggaagagtacggattcctgccggtgccgttgcgcgcccacagcacc
ctccaggatgaggccgagagcttcatgcacgtgcagctggaggtcatggtgaagcacccg
ccagcagagccctcccgcttcatctcagctcccaccaagacaccggacaagatgggcttc
gacgaggtcttcatgatcaacctgaggcggcggcaggaccggcgggagcgcatgctgcgg
gcgctgcaggcacaggagatcgagtgccggctggtggaggccgtggacggcaaagccatg
aacaccagccaggtggaggccctggggatccagatgctgcccggctaccgggacccctac
cacggccggcccctcaccaagggtgagctgggctgcttcctgagccactacaacatctgg
aaggaggtggtggaccaggggctgcagaaatcgcttgtgtttgaggatgacctgcgtttt
gagatcttcttcaagagacgcctgatgaacctcatgcgggacgtggagcaggaaggcctg
gactgggacctcatctacgtgggccggaagcggatgcaggtggagcaccccgagaaggct
gtgccccgcgtgaggaacctggtggaggccgactactcctactggaccctggcatacgtg
atctccctgcaaggcgcccgcaaactgttggctgctgagccgctctccaagatgctgcct
gtggacgagttcctgcctgtcatgttcgacaagcacccagtgtccgagtacaaggcccac
ttctccctccgcaacctgcgtgccttctctgtggagccactgctcatctaccccacacac
tacacaggagatgatggctatgtgagtgacaccgagacctcagtcgtatggaacaatgag
cacgtcaagaccgactgggaccgcgccaagtcccagaagatgcgggagcagcaggcattg
agccgtgaggccaagaactcggacgtgctccagtccccactggacagtgctgcccgggat
gaactctga
DBGET
integrated database retrieval system
