Pongo pygmaeus (Bornean orangutan): 129021025
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Entry
129021025 CDS
T10128
Symbol
SBNO2
Name
(RefSeq) protein strawberry notch homolog 2 isoform X1
KO
K26273
protein strawberry notch
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppyg03036
]
129021025 (SBNO2)
Chromosome and associated proteins [BR:
ppyg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129021025 (SBNO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
129021025
NCBI-ProteinID:
XP_054322079
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All DBs
Position
20:complement(856571..929159)
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AA seq
1368 aa
AA seq
DB search
MLAVGPAMDRDYPQHEPPPAGSLLYGPSPLQSAMLHCPYWNTFSLPPYPAFSSDSRPFMS
SASFLGSQPCPDTSYAPVATASSLPPKTCDFVQDSSYFEDFSNISIFSSSVDSLSDIVDT
PDFLPADSLNQVSTIWDDNPAPSTHDKLFQLSRPFAGFEDFLPSHSTPLLVSYQEQSVQS
QPEEEDEAEEEEAEELGHTETYADYVPSKSKIGKQHPDRVVETSTLSSVPPPDITYTLAL
PSDSGALSALQLEAITYACQQHEVLLPSGQRAGFLIGDGAGVGKGRTVAGVILENHLRGR
KKALWFSVSNDLKYDAERDLRDIEATGIAVHALSKIKYGDTTTSEGVLFATYSALIGESQ
AGGQHRTRLRQILDWCGEAFEGVIVFDECHKAKNAGSTKMGKAVLDLQNKLPLARVVYAS
ATGASEPRNMIYMSRLGIWGEGTPFRNFEEFLHAIEKRGVGAMEIVAMDMKVSGMYIARQ
LSFSGVTFRIEEIPLAPAFERVYNRAALLWAEALNVFQQAADWIGLESRKSLWGQFWSAH
QRFFKYLCIAAKVRRLVELAREELARDKCVVIGLQSTGEARTREVLGENDGHLNCFVSAA
EGVFLSLIQKHFPSTKRKRDRGAGSKRKRRPRGRGAKAPRLACEAAGVIRISDDSSTESD
PGLDSDFNSSPESLVDDDVVIIDAIGLPSDDRGPLCLPQRDPHGPGVLERVERLKQDLLD
KVRRLGRELPVNTLDELIDQLGGPQRVAEMTGRKGRVVSRPDGTVAFESRAEQGLSIDHV
NLREKQRFMSGEKLVAIISEASSSGVSLQADRRVQNQRRRVHMTLELPWSADRAIQQFGR
THRSNQVSAPEYVFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENK
YGTRALHCVLTTILSQTENKVPVPQGYPGGVPTFFRDMKHGLLSVGIGGRESRNGCLDVE
KDCSITKFLNRILGLEVHKQNALFQYFSDTFDHLIEMDKREGKYDMGILDLAPGIEEIYE
ESQQVFLAPGHPQDGQVVFYKISVDRGLKWEDAFAKSLELTGPYDGFYLSYKVRGNKPSC
LLAEQNRGQLFTVYKPNIGRQSQLEALESLRRKFHRVTAEEAKEPWESGYALSLTHCSHS
AWNRHCRLAQEGKDCLQGLRLRHHYMLCGALLRVWGRIAAVMADVSSSSYLQIVRLKTKD
RKKQVGIKIPEGCVRRVLQELRLMDADVKRRQARALGCPAPPAPRPLALPCRPGEVLDLT
YSPPAEAFPPPPHFSFPAPLSLDAGPGVVPLGTPDAQADPAALAHQGCDINFKEVLEDML
RSLHAGPPSEGALGEGAGAGAGGAVGGGPERQSVIQFSPPFPGAQAPL
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcagtggggcccgccatggacagggattacccgcagcatgaacccccgccggcg
ggcagcctcctgtacggcccgtcgcccctgcagagtgccatgctgcactgcccctactgg
aacaccttctcgctgccgccgtaccccgccttctccagcgacagccgcccgttcatgagc
tccgcctccttcctcggcagccagccctgcccagacaccagctatgcccccgtggccacc
gcctccagcttgccaccaaagacctgcgactttgttcaggactcctcctattttgaggac
ttctccaacatctccatcttctcctcgtccgtggactccctgtcagacatcgtggacacg
cccgacttcctgccagccgacagcctcaaccaggtgtccaccatctgggatgataaccct
gccccctccacccacgataagctgttccagctcagcaggccgtttgcaggcttcgaggac
tttctgccctcccacagcaccccacttctcgtcagctaccaggagcagagtgtgcagagc
cagccagaggaggaggacgaggctgaggaggaggaggcggaggagctagggcacacagag
acctacgccgactacgtgccgtccaagtccaagattgggaagcagcacccagaccgcgtg
gtggagaccagcacactgtccagcgtcccgcccccagacatcacctacaccctggccctg
ccctcggacagcggggccctgtctgccctgcagctggaggccatcacctacgcctgccag
caacacgaggtcctgctccccagcgggcagcgcgcgggctttctcatcggcgacggggcc
ggtgtgggcaaaggccggacagtggccggagtcatcctggagaaccacctgcgtggccga
aagaaagcattgtggttcagcgtctccaacgacctcaagtacgacgcggagcgcgacctg
cgggacatcgaagccacgggcatcgcggtgcacgcgctcagcaagatcaagtacggtgac
accactacctcagagggcgtcctcttcgccacctactccgccctgattggggagagccag
gccggtggccagcatcgcactcgcctccggcagatcctggactggtgtggggaggccttc
gagggcgtcatcgtgttcgacgagtgtcacaaagccaagaatgctggctccaccaagatg
ggcaaggccgtgctagacctgcagaacaagctgcccctggcccgtgtcgtctatgccagc
gccacaggtgcctctgagcctcgaaacatgatctacatgagccgcttgggtatctggggc
gagggcacacccttccggaactttgaggagttcctgcacgccatcgagaagaggggtgtt
ggcgccatggagatcgtggccatggacatgaaggtcagcggcatgtacatcgcacgccag
ctcagcttctctggcgtcaccttccgcatcgaggagatcccgctggccccagccttcgag
cgcgtctacaaccgcgcggccctgctgtgggccgaggccctgaacgtgttccagcaggcg
gccgactggatcggcctggagtcgcgcaagtccctgtggggccagttctggtcggcacac
cagcgcttcttcaagtatctgtgcattgccgccaaggtgcgccggctggtggagctggcc
cgagaggagctggcgcgagacaagtgcgtggtcatcgggctgcagtccacgggcgaggcg
cgcacacgggaggtgctgggagagaacgacgggcacctcaactgcttcgtctcagccgct
gaaggcgtgttcctgtcgctaattcagaagcactttccatccaccaagagaaagcgggac
agaggagcgggcagcaagcggaaacggcgacctcggggacgcggggccaaagccccccgg
ctggcgtgcgaggcagcgggcgtcatccgcatcagtgacgacagcagcacagagtcggac
cccggcctggacagcgacttcaactcctcccctgagtccctggtggatgacgacgttgtc
atcattgatgccatcgggctccccagtgacgaccggggacccctgtgcctcccacagaga
gacccgcatggcccgggagtcctggagcgggtggagcggctgaagcaggatctgctggac
aaagtgcggcggctgggccgggagctgccagtcaacaccctggacgagctcatcgaccag
ctgggcggcccccagcgggtggccgagatgaccggcaggaaaggccgcgtggtgtccagg
cctgacgggacggtggccttcgagtcgcgggcagagcagggtctgtccatcgaccacgtg
aacctcagggagaagcagcgcttcatgagcggcgagaagctcgtggccatcatctcggag
gcctccagctcaggtgtctccctccaagccgaccgccgcgtccagaaccagcggcgccgc
gtgcacatgaccttggagctgccgtggagcgccgaccgcgccatccagcagttcggccgc
acccaccggtccaaccaggtctcagcgccagagtatgtcttcctcatctcggagctggcc
ggggagcgccggttcgcctccatcgtggccaagcgcctggagagtctgggggccctgacc
catggagaccgccgcgccacggagtcccgtgacctcagcaagtacaactttgagaacaag
tatggcacccgggccctgcactgtgtcctcaccaccatcctgagccagactgagaacaaa
gtgcctgtgcctcagggataccctggaggggtccccaccttcttccgggacatgaagcac
ggcctgctgtctgtgggcattggcggccgggagtcccggaatggctgcctggacgtggag
aaggactgttccatcaccaagttcctgaaccgcatcctggggctggaggtgcacaagcag
aacgccctgttccagtacttctcagacacctttgaccacctcatcgagatggataagcgg
gagggcaaatacgacatgggcatcctggaccttgctcccggcatcgaggagatctacgag
gagagccagcaggtgttcctggctcccgggcacccgcaggacgggcaggtggtcttctac
aagatcagcgtggaccgcggcctgaagtgggaggacgcctttgccaagtcgctggagctg
acgggcccctatgacggcttctacctctcctacaaggtccgcggtaacaagcccagctgc
ctgctggcggagcagaaccgcggccagctcttcacggtgtacaagcccaacatcggccgg
cagagccagctggaggccctggagagtctccgccgcaagttccaccgggtcaccgcggag
gaggccaaggagccctgggagagtggctacgccttgtcgctgacgcactgcagccacagc
gcctggaaccggcactgccgactggcgcaggagggtaaggactgcctgcaggggctgcgg
ctgcggcaccactacatgctgtgcggcgcgctgctgcgcgtgtggggccgcatcgccgcc
gtcatggccgacgtcagcagcagcagctacctgcagatcgtgcggctgaagaccaaggac
aggaagaagcaagtgggcatcaagatccccgagggctgcgtgcgccgcgtgctacaggag
ctgcggctgatggatgcggacgtgaagcgcaggcaggcgcgcgccctgggctgccccgcc
cctcccgccccgcgcccgctggcgctgccttgccgccccggagaggtgctggacctcacc
tacagccccccggccgaggccttcccgccgcccccgcacttctccttcccagcgccactg
tccctggatgccggccccggcgtcgtgccgctgggcacccccgacgcccaggccgaccct
gcggccctcgcgcaccagggctgcgacatcaacttcaaggaggtgctggaggacatgctg
cgctcgctgcacgcagggccgccctccgagggcgcgctgggggagggcgcgggcgcgggg
gcggggggcgcggtgggcggtggtcccgagcggcagagcgtgatccagtttagcccaccc
ttccccggcgcccaggctcctctctga
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