Pongo pygmaeus (Bornean orangutan): 129021145
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Entry
129021145 CDS
T10128
Symbol
SIX5
Name
(RefSeq) homeobox protein SIX5 isoform X2
KO
K19474
homeobox protein SIX5
Organism
ppyg Pongo pygmaeus (Bornean orangutan)
Brite
KEGG Orthology (KO) [BR:
ppyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppyg03000
]
129021145 (SIX5)
Transcription factors [BR:
ppyg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
129021145 (SIX5)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
129021145
NCBI-ProteinID:
XP_054322200
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Position
20:complement(51750988..51755596)
Genome browser
AA seq
738 aa
AA seq
DB search
MATLPAEPSAGPAAGGEAVAAAATEEEEEEARQLLQTLQAAEGEAAAAAGAGAGEAAAGA
EGPGSPGVPRSPPEAASEPPTGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLR
GSDPVLRARALVAFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALG
AVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLS
LTQVSNWFKNRRQRDRTGAGGGAPCKSESDGNPTTEDESSRSPEDLERGAAPVSAEAAAQ
GSIFLAGTSPPAPCPASSSILVNGSFLAASSSPAVLLNGGPVIINGLALGEASSLGPLLL
TGGGGAPPPQPSPQGASEAKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAVPGPALGEEV
PGPLAQVVPGPPPAATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLSPTSPLLNLPQVVPT
SQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFLL
ANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPSLALPLKPETAISVPEGGLP
VAPSPALPEAHSLGTLSAQQPPPAAATTSSTSLPFSPDTPGLLPNFPAPPPEGLMLSPAA
VPVWSAGLELSAGTEGLLEAEKGLGTQAPHTVLRLPDPDPEGLLLGATAGGEVDEGLEAE
AKVLTQLQSVPVEDPLEL
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggctaccttgcctgcggagccgagcgcggggcccgcggccgggggggaggcggtggcg
gcggcggcgaccgaagaggaggaggaggaagcgcgccagctcttgcagactttgcaggcg
gccgagggtgaggcggcggcggcggccggggccggggcgggcgaagcggctgcgggagct
gagggcccgggatccccgggcgtccccaggtcgccccccgaggccgcttccgaaccgccc
acgggcctccgcttctcgcccgagcaggtggcgtgcgtctgcgaggcgctgctccaggcg
ggccacgcaggccgcttgagccgcttcctgggcgcactgcccccggccgagcgcctacgt
ggcagcgacccggtgttgcgcgcgcgggccctggtggccttccagcggggcgagtacgcc
gagctctaccggctactcgagagccgccccttccccgccgcccaccacgccttcctgcag
gatctctacctgcgcgcgcgctaccatgaggccgagcgggcccgcggccgcgcgctgggc
gcagtggacaagtatcgactgcgcaagaagttcccgctgcccaagaccatctgggacggc
gaggagacagtctactgcttcaaggagcgctcccgcgcagcgctcaaggcctgctaccgc
ggcaaccgctaccccacgccggacgagaagcgccgcctggccacactcaccggcctgtcg
ctcacacaggtcagcaactggttcaagaaccggcgacagcgcgaccggaccggggccgga
ggcggcgcgccctgcaagagcgagtctgatgggaatcccacgactgaggacgagtccagc
cgaagtcctgaagacctggagagaggggcggccccagtatctgccgaggccgctgcccag
ggctccatattcctggcagggaccagccctcccgcgccgtgcccggcctcctcctccatc
ctggtgaacgggagcttcctggcagccagcagctccccagcagtgctcctcaacgggggc
cccgtcatcatcaacggcctggccctgggcgaggcctccagcctgggcccgctgctgctc
actgggggcgggggtgcccctccaccgcagcccagccctcagggggccagcgaggccaag
acctccctggtcctggaccctcagacaggggaggtgcggctggaggaggctcagtcggag
gcccctgagaccaaaggggcccaggtggctgttccgggaccagcccttggagaggaggtc
ccgggacccctggcccaagtggtgcctggccccccgccggctgctacctttcctctgccc
ccggggccagtgcctgctgtggctgccccacaagtggtaccactctccccacccccgggg
taccccacgggcctgagccccacctccccactgttgaacctgccccaggtagtgcccacc
tcacaggtggtgaccctgccccaggctgtggggcccctgcagctgttggcagccgggcca
ggcagccctgtgaaggtggcagctgcagcaggccctgccaacgtgcacctcatcaactcc
ggggtgggcgtgactgccctgcagctgccttcggccactgccccaggaaacttcctcctg
gctaaccctgtgtctggcagccccatcgtgacgggtgtggccgtgcagcagggcaaaatc
atcctcaccgccaccttccctaccagcatgcttgtctcccaggtcctgcctccagccccc
agcctggccctgccactgaagccagagacggccatctccgtgcctgagggaggcctcccg
gtggcccccagccctgctctcccagaggctcattccctaggcaccctttctgcgcagcag
ccaccccccgccgctgccaccacctccagcaccagcctgcctttctcccctgacacccct
ggcctcctgcccaacttcccggcgcccccaccagaggggctgatgctgtcacccgcggcc
gtgcctgtctggtcagcagggctggaactaagcgcaggaacagaggggctgctggaagcg
gaaaaggggctggggacacaggccccccacactgtgctgaggctgccggaccccgaccca
gaggggctgctcctgggggccaccgcagggggtgaggttgacgaggggttggaagctgag
gccaaggttctgacccagctccagtcggtgcctgtggaggatcccttggaactgtga
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